BAC Information

Click to search

BAC

Clone NameB6Ng01-276N13
ChromosomeX (Build37)
Map Location 85,393,369 - 85,394,500
singlet/doubletsinglet
Overlap genenone
Upstream geneIl1rapl1, LOC667876
Downstream geneEG667883, LOC667891, EG245506, LOC667911, LOC100041707, EG436213, LOC667919, LOC100041727
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276N13.bB6Ng01-276N13.g
ACCGA077523GA077524
length1,126825
definitionB6Ng01-276N13.b B6Ng01-276N13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctagttcatgatgtttcccaagaaagcaacaataagttacata
aacaagtagtctagattcgtgtgccacctccctcttgccctggcatttgt
ccccttgctttcacctatagcctcatagtatatcctcatgatatgctaat
aggatgagagaaactcagaaatgatataggtatggcacaatatgccaagg
aacacagtcacatctaaggctcatcaaagaggaacattaaatgattatag
tcaggggatattattccagtgagaacaactatgggcagtacagctgccca
ttgacttctgtgaataaatataatgtctcccataagtctatatggagaat
ttagcagtactaaatagtttgactgtatggttaatgctctcagaaggata
aatagaaggtagacagggacaaagtgtcttctgaaaagatatctgtatgt
gtgtatatgaatgagaccataaatagtatatgaattcttggttattatgc
cagtgcatattagacaacatctattagagaacaggttctttcctactagg
taaatggaattactgtccactgagtttctaactaacttttttcttctgcc
cactgattttaccatgccacaatgaatataactatatcctattactgtga
atagaagcaggctaattttatgtacaacagagagctttcttctctcaatt
ggttacttactataatctctaattacgcagtttatgagaagtagataacc
atgatgtgttgggagatagtgacatcctttcaaagaaacaactagttaca
ctggaaagattacattgggtccctgtattaatctcctatggttgctataa
cattgtagcaaaatcttgtcagcttaaatcaacagaattgctctcttaca
gttctgaaatctaaatatctgaaattaatatcaccaaatcaaattcaagg
tgtcaacaggctatggtacccctagaagttttaggggataactttttttt
tttcttttattttctttctatcttctggcagttgcagaatttctgagtct
ggtcatcacttctaacaatttacctatctgttctgttgggagaaatactt
ctggctctgtctcttatcagaagcaa

gaattcctattctctccaatacttttggcatgaaggagtgtcatattttg
acaaaggctttttcagcatctaatgagatgatcatgtggggttttttttg
tttgttttttgtttgtttggtttgctttgagtttgtttatatagtagatt
gccttgatggatttcattatattgaaccatccctgcatctctgggatgaa
gcctacttaaccacggtgaagtgaataaaagaacacatctcttgtattca
gtttgcaagaattttattgagtatttttcattagggaaattggtctcaaa
ttttttgttttgtttgttgggtctttgtgtggtttaggcattactgtaac
tatggcttcatagaatgtattaggtagggtttcttcagtttatatatttt
atgaaatactttgagaagtataatattagatcttctttgaaggtctaata
gaattctgcactaaaaccatctgatcttggagattttttagttgggagac
ttttaatgactgtttctatttccttgggggttatgggttgtttagatgat
tgatctgattctgatttgattttggtacttggtatctgtctggaaaatca
tccatttcatctagattttccagtttttgttgagtataggcttttgtagt
aggatctgattttttttttctttcttcaagtttctggtgttatgtctcca
ttttcattttctgattttgttaattttggattctgtctcaatgcccttct
ggtttagtctgggctaaagggtatatcttatctttgttgattttttattc
aaagaaccaagtctcatgggtttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_85393369_85394500
seq2: B6Ng01-276N13.b_44_1169

seq1  GAATTCTCTAGTTCATGATGTTTCCCAAGAAAGCAACAATAAGTTACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGTTCATGATGTTTCCCAAGAAAGCAACAATAAGTTACATA  50

seq1  AACAAGTAGTCTAGATTCGTGTGCCACCTCCCTCTTGCCCTGGCATTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTAGTCTAGATTCGTGTGCCACCTCCCTCTTGCCCTGGCATTTGT  100

seq1  CCCCTTGCTTTCACCTATAGCCTCATAGTATATCCTCATGATATGCTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGCTTTCACCTATAGCCTCATAGTATATCCTCATGATATGCTAAT  150

seq1  AGGATGAGAGAAACTCAGAAATGATATAGGTATGGCACAATATGCCAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGAGAGAAACTCAGAAATGATATAGGTATGGCACAATATGCCAAGG  200

seq1  AACACAGTCACATCTAAGGCTCATCAAAGAGGAACATTAAATGATTATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGTCACATCTAAGGCTCATCAAAGAGGAACATTAAATGATTATAG  250

seq1  TCAGGGGATATTATTCCAGTGAGAACAACTATGGGCAGTACAGCTGCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGATATTATTCCAGTGAGAACAACTATGGGCAGTACAGCTGCCCA  300

seq1  TTGACTTCTGTGAATAAATATAATGTCTCCCATAAGTCTATATGGAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTCTGTGAATAAATATAATGTCTCCCATAAGTCTATATGGAGAAT  350

seq1  TTAGCAGTACTAAATAGTTTGACTGTATGGTTAATGCTCTCAGAAGGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGTACTAAATAGTTTGACTGTATGGTTAATGCTCTCAGAAGGATA  400

seq1  AATAGAAGGTAGACAGGGACAAAGTGTCTTCTGAAAAGATATCTGTATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAGGTAGACAGGGACAAAGTGTCTTCTGAAAAGATATCTGTATGT  450

seq1  GTGTATATGAATGAGACCATAAATAGTATATGAATTCTTGGTTATTATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATATGAATGAGACCATAAATAGTATATGAATTCTTGGTTATTATGC  500

seq1  CAGTGCATATTAGACAACATCTATTAGAGAACAGGTTCTTTCCTACTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCATATTAGACAACATCTATTAGAGAACAGGTTCTTTCCTACTAGG  550

seq1  TAAATGGAATTACTGTCCACTGAGTTTCTAACTAACTTTTTTCTTCTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGAATTACTGTCCACTGAGTTTCTAACTAACTTTTTTCTTCTGCC  600

seq1  CACTGATTTTACCATGCCACAATGAATATAACTATATCCTATTACTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATTTTACCATGCCACAATGAATATAACTATATCCTATTACTGTGA  650

seq1  ATAGAAGCAGGCTAATTTTATGTACAACAGAGAGCTTTCTTCTCTCAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGCAGGCTAATTTTATGTACAACAGAGAGCTTTCTTCTCTCAATT  700

seq1  GGTTACTTACTATAATCTCTAATTACGCAGTTTATGAGAAGTAGATAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACTTACTATAATCTCTAATTACGCAGTTTATGAGAAGTAGATAACC  750

seq1  ATGATGTGTTGGGAGATAGTGACATCCTTTCAAAGAAACAACTAGTTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTGTTGGGAGATAGTGACATCCTTTCAAAGAAACAACTAGTTACA  800

seq1  CTGGAAAGATTACATTGGGTCCCTGTATTAATCTCCTATGGTTGCTATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGATTACATTGGGTCCCTGTATTAATCTCCTATGGTTGCTATAA  850

seq1  CATTGTAGCAAAATCTTGTCAGCTTAAATCAACAGAATTGCTCTCTTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTAGCAAAATCTTGTCAGCTTAAATCAACAGAATTGCTCTCTTACA  900

seq1  GTTCTGAAATCTAAATATCTGAAATTAATATCACCAAATCAAATTCAAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAAATCTAAATATCTGAAATTAATATCACCAAATCAAATTCAAGG  950

seq1  TGTCAACAGGGCTATGGTACCCCTAGAAGTTTTAGGGGATAAC--TTTTT  998
      |||||||| ||||||||||||||||||||||||||||||||||  |||||
seq2  TGTCAACA-GGCTATGGTACCCCTAGAAGTTTTAGGGGATAACTTTTTTT  999

seq1  TTTTCTTTTATTTTCTTTTCCTATCTTCTGGCAGTTGCCAGAATTTCTGA  1048
      ||||||||||||||||||  ||||||||||||||||| ||||||||||||
seq2  TTTTCTTTTATTTTCTTT--CTATCTTCTGGCAGTTG-CAGAATTTCTGA  1046

seq1  GTCTTGGCCATCAC-TCTAACCAAATTACCTATTCTGTTCTGTGGGAAGA  1097
      ||| ||| |||||| ||||| ||| ||||||| |||||||||| || |||
seq2  GTC-TGGTCATCACTTCTAA-CAATTTACCTA-TCTGTTCTGTTGGGAGA  1093

seq1  AAATAACTTTCTGCTCTGTCTCTTATCAGAAGCAA  1132
      ||   ||||   |||||||||||||||||||||||
seq2  AA--TACTTCTGGCTCTGTCTCTTATCAGAAGCAA  1126


| Home | SequenceCutter | Blast | Download |