MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-281H18
Chromosome	X (Build37)
Map Location	164,382,872 - 164,383,970
singlet/doublet	singlet
Overlap gene	Frmpd4
Upstream gene	LOC667791, EG667794, LOC100040850, LOC627268, Tmsb4x, Tlr8, Tlr7, Prps2, EG627311
Downstream gene	EG667822, EG637566, Msl31, Arhgap6
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC667791 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667791
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	EG667794 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667794 MGI:3648637
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100040850 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040850
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC627268 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627268
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Tmsb4x (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19241 MGI:99510
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tlr8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170744 MGI:2176887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tlr7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170743 MGI:2176882
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110639 MGI:97776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627311 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627311 MGI:3648299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Frmpd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:333605 MGI:3042378
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667822 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667822 MGI:3646854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG637566 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:637566 MGI:3645245
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Msl31 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17692 MGI:1341851
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arhgap6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11856 MGI:1196332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG667794 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408484 GeneID:667794 MGI:3648637
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : predicted gene, EG667794 transcript_id : XM_992520.1

name	LOC100040850 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272511 GeneID:100040850
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040850 transcript_id : XM_001475388.1

name	LOC627268 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272534 GeneID:627268
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC627268 transcript_id : XM_001477546.1

name	Tmsb4x (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86476080 GeneID:19241 MGI:99510
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymosin, beta 4, X chromosome transcript_id : NM_021278.2

name	Tlr8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723494 GeneID:170744 MGI:2176887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : toll-like receptor 8 transcript_id : NM_133212.2

name	Tlr7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803199 GeneID:170743 MGI:2176882
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : toll-like receptor 7 transcript_id : NM_133211.3

name	Prps2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802916 GeneID:110639 MGI:97776
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoribosyl pyrophosphate synthetase 2 transcript_id : NM_026662.3

name	EG627311 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83004720 GeneID:627311 MGI:3648299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : predicted gene, EG627311 transcript_id : XM_891970.1

name	Frmpd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131064 GeneID:333605 MGI:3042378
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FERM and PDZ domain containing 4 transcript_id : NM_001033330.2

name	EG637566 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408488 GeneID:637566 MGI:3645245
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG637566 transcript_id : XM_913285.2

name	Msl31 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802420 GeneID:17692 MGI:1341851
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : male-specific lethal-3 homolog 1 (Drosophila) transcript_id : NM_010832.3

name	Arhgap6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130288 GeneID:11856 MGI:1196332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 6 transcript_id : NM_009707.3

name	EG667794 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94408485 GeneID:667794 MGI:3648637
definition	codon_start : 1 product : hypothetical protein protein_id : XP_997614.1

name	LOC100040850 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272512 GeneID:100040850
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475438.1

name	LOC627268 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272535 GeneID:627268
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477596.1

name	Tmsb4x (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946578 CCDS:CCDS30529.1 GeneID:19241 MGI:99510
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005829 - cytosol [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA]; GO:0030334 - regulation of cell migration [Evidence IDA] codon_start : 1 note : prothymosin beta 4 product : thymosin, beta 4, X chromosome protein_id : NP_067253.1

name	Tlr8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723495 GeneID:170744 MGI:2176887
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0003725 - double-stranded RNA binding [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003727 - single-stranded RNA binding [Evidence ISS]; GO:0005121 - Toll binding [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0051607 - defense response to virus [Evidence ISS]; GO:0006955 - immune response [Evidence IEA]; GO:0016064 - immunoglobulin mediated immune response [Evidence ISS]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0045087 - innate immune response [Evidence ISS]; GO:0045089 - positive regulation of innate immune response [Evidence ISS]; GO:0045356 - positive regulation of interferon-alpha biosynthesis [Evidence ISS]; GO:0045359 - positive regulation of interferon-beta biosynthesis [Evidence ISS]; GO:0045078 - positive regulation of interferon-gamma biosynthesis [Evidence ISS]; GO:0045416 - positive regulation of interleukin-8 biosynthesis [Evidence ISS] codon_start : 1 product : toll-like receptor 8 protein_id : NP_573475.2

name	Tlr7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875360 CCDS:CCDS30531.1 GeneID:170743 MGI:2176882
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003725 - double-stranded RNA binding [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003727 - single-stranded RNA binding [Evidence IMP]; GO:0035197 - siRNA binding [Evidence IMP]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0051607 - defense response to virus [Evidence ISS]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0045356 - positive regulation of interferon-alpha biosynthesis [Evidence ISS]; GO:0045359 - positive regulation of interferon-beta biosynthesis [Evidence ISS]; GO:0045078 - positive regulation of interferon-gamma biosynthesis [Evidence ISS]; GO:0045416 - positive regulation of interleukin-8 biosynthesis [Evidence ISS] codon_start : 1 product : toll-like receptor 7 protein_id : NP_573474.1

name	Prps2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386146 CCDS:CCDS30532.1 GeneID:110639 MGI:97776
definition	EC_number : 2.7.6.1 GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : phosphoribosyl pyrophosphate synthetase 2 protein_id : NP_080938.1

name	EG627311 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83004721 GeneID:627311 MGI:3648299
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897063.1

name	Frmpd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85362701 GeneID:333605 MGI:3042378
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : PDZ domain containing 10 protein_id : NP_001028502.1

name	EG637566 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94408489 GeneID:637566 MGI:3645245
definition	codon_start : 1 product : hypothetical protein protein_id : XP_918378.2

name	Msl31 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11545735 GeneID:17692 MGI:1341851
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IEA] GO_process : GO:0006333 - chromatin assembly or disassembly [Evidence IEA]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : male-specific lethal-3 homolog 1 protein_id : NP_034962.2

name	Arhgap6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87252724 CCDS:CCDS30534.1 GeneID:11856 MGI:1196332
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005100 - Rho GTPase activator activity [Evidence IDA] GO_process : GO:0007015 - actin filament organization [Evidence IDA]; GO:0048041 - focal adhesion formation [Evidence IDA]; GO:0043087 - regulation of GTPase activity [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : Rho GTPase activating protein 6 isoform a protein_id : NP_033837.2

name	LOC667791 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667791
definition	number : 1 pseudo : _no_value

name	EG667822 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667822
definition	number : 1 pseudo : _no_value

name	EG667822 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667822
definition	number : 2 pseudo : _no_value

clone name	MSMg01-457F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508J08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-129N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141I12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-281H18.b	B6Ng01-281H18.g
ACC	GA080950	GA080951
length	1,100	1,132
definition	B6Ng01-281H18.b	B6Ng01-281H18.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattccttgagaaaggacattaccagggttagttgaacctaaatatttc agaaagttaagtagttgtgaagcaagtgaaaaagatggtaaaaagctatg aagttatgttttcaaaaattccaagaaacagatctataacaacttggaac caacatgactctacatggtagatctaatccaattgctctccataacaagg ttggggcaaagtcacagttgctcctgaagtaaaggatcagcatcacattt gtggaagtctaaagacaatctcaggggctggtccacaccttctacctagt tttcaggcagaacttcccttatttgctgctgcactatgtattctaaactt gctgtcttgggagcttcaagagaattctgcctctatctttcatttatttg taggaatgctacaagtacagaaaaatgctgtcatggtttctaagtataca aactcaggttgtgaggcttacatggcaagatatttttatctgctaagtca tctcctcaggttaagagaagtgatcttatccactacaattaacttatatg catttccttccatataccacataccctgtcagtcaccaggcactgttact tgtgaatgaaatttccctgcaaaaggcaaagcatatgaagatttgacaaa ctgactgactaaagtttcagggttgtagaaagttgaaatactgtggatag agagccaaaatcatcttgggttatctttgttctcttaatggtcatttatc atctacttctgtctgcagtgtaagctagcatcatttagactaagaggaaa agccattgaagaacactaacctagtaggccaatagtttaaaccagtccca aaggtctgaatattatcatatagcaaagacatacactgtcttttgtgtga catcaatatatttggtaaatgtcttaattaatgagttttttgttttgttt gttttgtatttttctgtgactataaaaagttaatgtgactacttgcatag tagtcatcaatggcaacctgaatctgtgttccctgggcccatgatctgtc atatttactgcccaaatgactactattattcccttttgagtaaaattttt	gaattcatgatgatgaacgtgatagtgatgattaatgatgaagataaaga tgatgattttacagattgagattaagacttgcacaggctaggccagtctt gtacaactgatctatattgccagttctcagtctggatattgttgagctgg gtagtgcctgcagtgttaaaatcctggaaatgcaataaagtacgactaga aggaaaagggatctaagaacagtgttgatatttgagcagatctgagttat cagtgtctttaagtaaaggtctgtcatgtgtcaggcagtaggatttaagt gagtaattctagaaattagaactagaattaataggtatcaaaggagaagt actactcagctattaaaaacaatgaatttatgaaattcttaggctgtatc tggatatggatgtatctggaggatatcatcctgagtgaggtaacccaacc acaaaagaagtcacttgatatgcactcactgataagtggatattagccca gaaacctagaatacccatgatactatttgcaaaacacaagaaaatcaaga aggaagaccaacgtgcgtgaatacttcattcctccctagaatggggaaca aaatacccatggaaggagttacagagacaaagtttggagctaagacgaaa ggatggaccatccagagactgcaccacccggggatccatcccataatcag ccaccaaacccagacactattgtacatgccagcaagaatttgctgaaagg actctgatatagctgtctcctgtgaggtcatgccagtgtctggcaaatac agaagtagattctcacagtcatctataggatggaacacagggcccccaat ggaggagctagagaaagtatccaaggagctgaaggggtctgcaaccctct aggtggaacaataatatgaactatcagtacccccagagctgtatctctag ctgcatatgtagcagagatggcttagtggtcatcatggaagagagcccct tggtctacaaactttatatgacccagtacaggggacgcagactagagtag atgagtaggtagggagcagcagggggaaggtatagcgcttttggcaatac ctcttgatactgtaactagcacgtacatactc
quality values	Open. Hide. 58 33 35 41 58 58 58 58 62 62 47 54 49 62 62 62 62 33 29 56 47 62 62 62 47 41 62 62 62 62 49 51 56 56 38 38 43 46 43 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 54 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 58 58 58 58 54 54 58 58 58 58 58 58 54 54 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 42 58 58 58 58 58 45 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 54 58 54 58 58 58 54 58 58 58 50 58 43 54 58 58 58 58 58 58 58 47 58 58 58 51 50 58 58 54 58 58 58 58 51 47 49 58 47 40 46 32 58 58 58 49 51 50 51 51 54 58 58 58 50 46 29 58 58 51 38 46 50 58 58 51 58 58 51 39 58 58 41 40 48 52 58 58 53 54 58 50 53 39 41 49 58 50 50 51 39 54 41 58 58 58 41 39 51 51 54 58 39 53 45 47 51 58 42 51 40 47 37 53 53 53 47 47 40 33 51 50 58 58 52 52 53 45 53 53 52 45 33 26 23 32 54 52 37 50 53 54 54 54 32 42 52 53 50 40 50 37 38 42 54 50 39 39 37 37 33 42 38 39 41 33 42 47 40 42 45 41 46 38 40 54 37 53 40 42 39 31 37 32 53 28 52 53 37 52 37 42 26 40 31 40 36 36 40 54 54 42 33 41 31 39 27 46 31 46 18 34 52 40 46 51 31 22 31 30 34 53 45 32 53 40 53 32 32 32 32 37 26 42 38 28 32 32 39 34 8 8 17 17 41 31 31 31 39 36 51 51 31 31 46 22 28 20 17 33 18 20 46 31 29 51 35 31 42 31 42 42 31 36 31 27 28 31 31 31 31 37 33 31 27 30 31 31 31 42 46 46 31 42 34 31 38 30 43 33 32 31 46 33 43 36 47 47 37 31 16 34 30 31 31 24 32 36 37 38 31 27 31 34 36 36 46 29 30 39 24 32 47 29 22 27 16 31 18 27 21 33 37 31 29 19 31 38 42 21 33 48 48 48 48 31 38 25 44 44 31 35 9 44 26 35 26 28 41 22 31 18 26 31 47 47 47 31 31 24 38 23 18 32 30 22 21 32 24 48 48 48 30 30 21 25 14 25 22 31 16 25 32 32 27 25 30 16 24 32 33 28 32 27 17 24 37 28 24 34 27 34 30 16 15 32 23 26 12 13 11 11 25 23 21 11 18 26 27 27 29 18 28 11 26 7 40 9 20 27 40 24 6 28 15 22 26 22 21 21 27 27 28 24 13 7 14 28 20 47 14 9 20 24 28 5 28 10 19 34 17 6 6 14 3 7 16 28 24 16 11 15 18 5 19 8 30 11 20 30 28 22 11 10 4 3 2 26 23 17 15 17 17 17 4	Open. Hide. 62 47 39 39 62 47 42 54 62 48 44 50 24 20 27 27 28 24 38 59 62 59 59 62 62 62 62 59 59 62 59 59 59 62 62 59 62 59 59 62 62 62 62 59 62 62 62 62 62 59 59 62 59 59 62 59 59 62 49 42 43 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 54 56 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 38 51 62 62 62 62 62 46 37 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 54 54 54 58 58 54 58 58 54 46 54 58 58 48 43 58 58 54 47 58 58 54 54 58 58 58 44 58 58 54 58 58 58 58 54 58 58 58 58 58 52 58 58 58 58 54 58 58 58 54 58 58 58 43 47 58 54 58 54 58 54 42 58 58 58 51 51 39 51 49 58 58 58 53 58 58 58 54 58 58 40 50 51 58 58 58 53 53 58 49 58 58 54 58 58 58 51 58 53 58 48 46 58 58 58 53 58 50 49 50 58 58 42 51 41 44 41 43 41 52 58 58 58 41 22 58 58 50 58 49 37 51 52 53 58 53 53 52 32 58 54 53 54 58 58 58 49 58 40 54 51 37 58 37 51 34 32 58 58 50 41 58 39 33 44 54 38 33 50 38 51 47 46 29 44 51 34 39 41 37 54 40 35 39 51 32 42 42 54 45 49 54 51 17 19 35 54 30 53 39 53 33 22 34 25 51 38 42 29 31 54 42 32 39 47 31 47 38 34 49 49 37 53 42 25 37 41 47 34 51 54 53 33 40 52 35 53 52 53 45 30 35 37 25 44 42 52 28 31 49 40 34 32 52 32 47 52 40 31 51 31 21 42 34 41 34 34 29 31 53 29 31 31 31 43 31 42 35 28 51 31 51 31 32 35 8 51 26 33 32 31 41 18 25 28 35 39 51 31 31 31 29 37 28 31 51 43 43 29 42 31 34 46 42 25 32 31 36 37 23 42 31 32 38 31 32 27 23 25 43 35 43 34 32 30 31 31 38 36 25 21 32 41 33 31 30 26 35 32 32 46 32 29 33 31 33 30 23 32 23 17 20 31 22 30 34 19 38 34 31 31 39 32 36 48 33 31 31 24 31 25 38 16 21 22 18 31 21 27 31 24 21 29 11 47 47 32 31 37 34 38 32 20 15 17 28 24 27 22 21 20 25 26 27 37 30 10 24 31 19 30 38 22 22 33 22 23 29 25 22 32 21 23 4 13 31 32 18 32 33 34 33 30 20 22 28 37 27 24 33 31 32 21 18 19 24 23 32 27 34 32 28 32 21 5 9 10 19 21 19 17 34 27 28 10 24 5 13 13 21 18 21 15 11 18 4 5 3 13 15 28 27 29 24 11 20 3 3 3 5 16 23 8 8 5 3 12 19 18 14 17 13 21 6 8 29 12 17 11 34 18 26 28 38 20 11 26 9 25 24 28 13 24 24 16 5 9 13 20 6 14 28 28 9 3 3 5 9 3 5 21 16 22 22 5 7 5 8 6 22 8 4 10 8 4 11 15 8 17 15 12 11 28 14 2 3 9 8 5 2 2 15 28 30 28 15 7 6 9 9 2 2 12 4 3 3 7 5 18 18 18 6 4 5 1 5 10 9 10 6 8 19 6 19 22 8 11 8 25 9 17 9 3 1 6 4 17 4 10 5 15 1 1 4 8 7 10 6 4 6 12 4

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_164382872_164383970
seq2: B6Ng01-281H18.b_48_1147

seq1  GAATTCCTTGAGAAAGGACATTACCAGGGTTAGTTGAACCTAAATATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGAGAAAGGACATTACCAGGGTTAGTTGAACCTAAATATTTC  50

seq1  AGAAAGTTAAGTAGTTGTGAAGCAAGTGAAAAAGATGGTAAAAAGCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTTAAGTAGTTGTGAAGCAAGTGAAAAAGATGGTAAAAAGCTATG  100

seq1  AAGTTATGTTTTCAAAAATTCCAAGAAACAGATCTATAACAACTTGGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATGTTTTCAAAAATTCCAAGAAACAGATCTATAACAACTTGGAAC  150

seq1  CAACATGACTCTACATGGTAGATCTAATCCAATTGCTCTCCATAACAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATGACTCTACATGGTAGATCTAATCCAATTGCTCTCCATAACAAGG  200

seq1  TTGGGGCAAAGTCACAGTTGCTCCTGAAGTAAAGGATCAGCATCACATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCAAAGTCACAGTTGCTCCTGAAGTAAAGGATCAGCATCACATTT  250

seq1  GTGGAAGTCTAAAGACAATCTCAGGGGCTGGTCCACACCTTCTACCTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGTCTAAAGACAATCTCAGGGGCTGGTCCACACCTTCTACCTAGT  300

seq1  TTTCAGGCAGAACTTCCCTTATTTGCTGCTGCACTATGTATTCTAAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGCAGAACTTCCCTTATTTGCTGCTGCACTATGTATTCTAAACTT  350

seq1  GCTGTCTTGGGAGCTTCAAGAGAATTCTGCCTCTATCTTTCATTTATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTTGGGAGCTTCAAGAGAATTCTGCCTCTATCTTTCATTTATTTG  400

seq1  TAGGAATGCTACAAGTACAGAAAAATGCTGTCATGGTTTCTAAGTATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATGCTACAAGTACAGAAAAATGCTGTCATGGTTTCTAAGTATACA  450

seq1  AACTCAGGTTGTGAGGCTTACATGGCAAGATATTTTTATCTGCTAAGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGGTTGTGAGGCTTACATGGCAAGATATTTTTATCTGCTAAGTCA  500

seq1  TCTCCTCAGGTTAAGAGAAGTGATCTTATCCACTACAATTAACTTATATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCAGGTTAAGAGAAGTGATCTTATCCACTACAATTAACTTATATG  550

seq1  CATTTCCTTCCATATACCACATACCCTGTCAGTCACCAGGCACTGTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTTCCATATACCACATACCCTGTCAGTCACCAGGCACTGTTACT  600

seq1  TGTGAATGAAATTTCCCTGCAAAAGGCAAAGCATATGAAGATTTGACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATGAAATTTCCCTGCAAAAGGCAAAGCATATGAAGATTTGACAAA  650

seq1  CTGACTGACTAAAGTTTCAGGGTTGTAGAAAGTTGAAATACTGTGGATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGACTAAAGTTTCAGGGTTGTAGAAAGTTGAAATACTGTGGATAG  700

seq1  AGAGCCAAAATCATCTTGGGTTATCTTTGTTCTCTTAATGGTCATTTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAAAATCATCTTGGGTTATCTTTGTTCTCTTAATGGTCATTTATC  750

seq1  ATCTACTTCTGTCTGCAGTGTAAGCTAGCATCATTTAGACTAAGAGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTTCTGTCTGCAGTGTAAGCTAGCATCATTTAGACTAAGAGGAAA  800

seq1  AGCCATTGAAGAACACTAACCTAGTAGGCCAATAGTTTAAACCAGTCCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTGAAGAACACTAACCTAGTAGGCCAATAGTTTAAACCAGTCCCA  850

seq1  AAGGTCTGAATATTATCATATAGCAAAGACATACACTGTCTTTTGTGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTGAATATTATCATATAGCAAAGACATACACTGTCTTTTGTGTGA  900

seq1  CATCAATATATTTGGTAAATGTCTTAATTAATGAGTTTTTTGTTTTGTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATATATTTGGTAAATGTCTTAATTAATGAGTTTTTTGTTTTGTTT  950

seq1  GTTTTGTATTTTTTCTGTGACTATAAAAAGTTAATGTGACTACTTGCATA  1000
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTA-TTTTTCTGTGACTATAAAAAGTTAATGTGACTACTTGCATA  999

seq1  GTAGTCATCAATGGCAACCTGAATCTGTGTT-CCTGGG-CCATGATCTGT  1048
      ||||||||||||||||||||||||||||||| |||||| |||||||||||
seq2  GTAGTCATCAATGGCAACCTGAATCTGTGTTCCCTGGGCCCATGATCTGT  1049

seq1  CATATTTACTG-CCAAATGAACTACTATTATT-CCTTTTGAGTTAAAATT  1096
      ||||||||||| ||||||| |||||||||||| ||||||||| |||||||
seq2  CATATTTACTGCCCAAATG-ACTACTATTATTCCCTTTTGAG-TAAAATT  1097

seq1  TTT  1099
      |||
seq2  TTT  1100

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information