BAC Information

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BAC

Clone NameB6Ng01-283A15
ChromosomeX (Build37)
Map Location 125,359,818 - 125,360,890
singlet/doubletsinglet
Overlap geneLOC100040550
Upstream geneLOC385523, LOC100040516, Mdm4-ps, EG237030, LOC100040538
Downstream geneLOC100040562, LOC100040570, LOC669120, Diap2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283A15.bB6Ng01-283A15.g
ACCGA082100GA082101
length1281,065
definitionB6Ng01-283A15.b B6Ng01-283A15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cagggccaaaaaaaaaaaaatgggaatgggtgggtagggaagtggggggg
atggtatgggggattctggctctttctatagcatgttaatgactggccct
gaacctttacctgatcataacccttcac

gaattctttaggatcgattgggagttgtgtcactggggatggggtttgag
gtttcaaaagcccatggtattaccactaaatgttctctgccctttttttg
tggaacaagaggtaagctctcagctcttcacagagcatcacggctgcctg
actactgccctgctccctaccatgatggtcactcattctaagcctctgaa
attgtaagtcctacttataagttgttttggtcatgggtggcttatcacag
tgatagaaaagtaactaggatgggtgaatattttaaagttgtagatttgg
gggccagagtgatggctctacaattaaaccagtttctatttctagcactc
atatctgatgatttacaaccacctttaactccagttattgagatgtgatg
cacctctcgctataaaacttgtctccgaaatttctacatagttgactgga
agtaaattaattttctgctcctaatagaatttcatttaatattcaaatct
tttttattgagttacaaaaacttttttctcattatagaattatattatac
catttatttattatcttctgccctccaagtgatatgttaatttcctaggg
atgccataataaagtatcccaaactgccttcaaacaatagaaacttctga
ggtttaaatttaaaaaaaaaaatcaaaatgtcaacaaatgttggccttta
ttcgtttgtttgtttgtttgtccctttgttgtattatttcctgatgactg
ttaaggcgaacatgtttcatgcatctccactattttcacttttatataac
atcttccttttgtctccatctcattatagcttcatacctctgagcaggac
agcctttgaacctcaaatttctcttccttataatgttaaccacattgcat
tagtgccatggcaaagaatcctaccttaacttgatcatctgtaaaggact
taattttaaatgaggccacatttattaaatggaggatattgaatttagta
tcctatggatagtcatatcataaatacacagagctaatctgaactaacca
gatagtaaactcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_125359818_125360890
seq2: B6Ng01-283A15.g_66_1130 (reverse)

seq1  TTTGAGTTTTACTTATCCTGTTAGTTTCAGATTTTAGCTCTGTGTATTTT  50
      |||||| ||||| ||||  ||||| ||||||  ||||||||||||| |||
seq2  TTTGAG-TTTAC-TATCTGGTTAG-TTCAGA--TTAGCTCTGTGTA-TTT  44

seq1  ATGAATTATGACTATTCCATAGGATACTAAATTCAATATCCTCCATTTTA  100
      ||||  |||||||| |||||||||||||||||||||||||||||| ||||
seq2  ATGA--TATGACTA-TCCATAGGATACTAAATTCAATATCCTCCA-TTTA  90

seq1  ATAAATGTGGCCTCATTTAAAATTAAGTCC-TTACAGATGATCAAGTTAA  149
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATAAATGTGGCCTCATTTAAAATTAAGTCCTTTACAGATGATCAAGTTAA  140

seq1  GGTA-GATTCTTTGCCATGGCACTAATGCAATGTGGTTAACATTATAAGG  198
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGATTCTTTGCCATGGCACTAATGCAATGTGGTTAACATTATAAGG  190

seq1  AAGAGAAATTTGAGGTTCAAAGGCTGTCCTGCTCAGAGGTATGAAGCTAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAATTTGAGGTTCAAAGGCTGTCCTGCTCAGAGGTATGAAGCTAT  240

seq1  AATGAGATGGAGACAAAAGGAAGATGTTATATAAAAGTGAAAATAGTGGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGATGGAGACAAAAGGAAGATGTTATATAAAAGTGAAAATAGTGGA  290

seq1  GATGCATGAAACATGTTCGCCTTAACAGTCATCAGGAAATAATACAACAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATGAAACATGTTCGCCTTAACAGTCATCAGGAAATAATACAACAA  340

seq1  AGGGACAAACAAACAAACAAACGAATAAAGGCCAACATTTGTTGACATTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAAACAAACAAACAAACGAATAAAGGCCAACATTTGTTGACATTT  390

seq1  TGATTTTTTTTTTTAAATTTAAACCTCAGAAGTTTCTATTGTTTGAAGGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTTTTTTAAATTTAAACCTCAGAAGTTTCTATTGTTTGAAGGC  440

seq1  AGTTTGGGATACTTTATTATGGCATCCCTAGGAAATTAACATATCACTTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGGATACTTTATTATGGCATCCCTAGGAAATTAACATATCACTTG  490

seq1  GAGGGCAGAAGATAATAAATAAATGGTATAATATAATTCTATAATGAGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCAGAAGATAATAAATAAATGGTATAATATAATTCTATAATGAGAA  540

seq1  AAAAGTTTTTGTAACTCAATAAAAAAGATTTGAATATTAAATGAAATTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTTTTGTAACTCAATAAAAAAGATTTGAATATTAAATGAAATTCT  590

seq1  ATTAGGAGCAGAAAATTAATTTACTTCCAGTCAACTATGTAGAAATTTCG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAGCAGAAAATTAATTTACTTCCAGTCAACTATGTAGAAATTTCG  640

seq1  GAGACAAGTTTTATAGCGAGAGGTGCATCACATCTCAATAACTGGAGTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAGTTTTATAGCGAGAGGTGCATCACATCTCAATAACTGGAGTTA  690

seq1  AAGGTGGTTGTAAATCATCAGATATGAGTGCTAGAAATAGAAACTGGTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGTTGTAAATCATCAGATATGAGTGCTAGAAATAGAAACTGGTTT  740

seq1  AATTGTAGAGCCATCACTCTGGCCCCCAAATCTACAACTTTAAAATATTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAGAGCCATCACTCTGGCCCCCAAATCTACAACTTTAAAATATTC  790

seq1  ACCCATCCTAGTTACTTTTCTATCACTGTGATAAGCCACCCATGACCAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCCTAGTTACTTTTCTATCACTGTGATAAGCCACCCATGACCAAA  840

seq1  ACAACTTATAAGTAGGACTTACAATTTCAGAGGCTTAGAATGAGTGACCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTATAAGTAGGACTTACAATTTCAGAGGCTTAGAATGAGTGACCA  890

seq1  TCATGGTAGGGAGCAGGGCAGTAGTCAGGCAGCCGTGATGCTCTGTGAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTAGGGAGCAGGGCAGTAGTCAGGCAGCCGTGATGCTCTGTGAAG  940

seq1  AGCTGAGAGCTTACCTCTTGTTCCACAAAAAAAGGGCAGAGAACATTTAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGAGCTTACCTCTTGTTCCACAAAAAAAGGGCAGAGAACATTTAG  990

seq1  TGGTAATACCATGGGCTTTTGAAACCTCAAACCCCATCCCCAGTGACACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATACCATGGGCTTTTGAAACCTCAAACCCCATCCCCAGTGACACA  1040

seq1  ACTCCCAATCGATCCTAAAGAATTC  1073
      |||||||||||||||||||||||||
seq2  ACTCCCAATCGATCCTAAAGAATTC  1065


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