BAC Information

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BAC

Clone NameB6Ng01-284H16
ChromosomeX (Build37)
Map Location 124,609,959 - 124,611,067
singlet/doubletsinglet
Overlap genenone
Upstream gene4921511C20Rik, 4930412D23Rik, LOC385523
Downstream geneLOC100040516, Mdm4-ps, EG237030, LOC100040538, LOC100040550
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284H16.bB6Ng01-284H16.g
ACCGA083170GA083171
length8331,154
definitionB6Ng01-284H16.b B6Ng01-284H16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacgcagatgtgggactggaagagctgaaagtcccatctcttgct
ccaaaggcacctaggagaagactggctcccatatggttaagaagagggtc
tcatttttcacctcaacagtggcacacttcctccaacaaaaccacaccta
ctccaacaagataacatctacaaatagaacaactcttgggccaagaatat
tcaaaccacaatcatggatgctaaattaaatattgaaactgtcaatggta
taaggcaaagtttcctctatgaggcagattcaggttcaactagaattttg
aatttttgatgcagaatccaaattctattctaggtactcaagctcaaggt
gtaatagctaatttattttagcctcctttttcagatgcctcttttactaa
ccacttagtttctgttaaactggtagtttctataaagtctgcttctaact
ttaaagaaagatgccaggatgtggtttttccctttaaaattaaacaaata
aacaactacaacaacaacaaacctgtaatctggagattcatagtcaaaac
taggtcccagaatacctaggtgtggttacaggtggtagaaatacacactt
tcaattggctataaactgtgtctgaatggttttctcttgtgggctgtcca
cagaggaataaaagagatttaatgcatataaggatatcatagaaaatact
aagcacaattgcaaaacagctacgattttgaaactatttaagtttgaaaa
taaatgaatacatgctaaattgtagtaatgtcttctaataaattgttttc
ccacagttatagtaaaactatatctatatgttc

gaattcattaaaaatgaagacagaaaataccccaatttacaggacacaat
gaaagcagtgttaagaggataattcctagcattaagtgctttcatataga
aattggagagatctaatacaagcaacttgacagcacacctgtaatctcta
gaacaaaaataatcatacaaaaccaagaaaagaagatgccaggaaatagt
caacacatgcttgtaaacaaccagttttaaaagagagagagagaatgata
caaagaatcaacaatatcagctctagaacagaaagaagcatacaaactca
agaggagaagacaccatgaaatagtcaaactcatgactgaaaccaaccag
ttacaaaaaaagagaatgataaaaagaatcaacaatatgaagaattgttt
ttgttgagaaaataaacaagatagataagccgttaggcaaactaactaga
gggcacagagaaactatccaaattaacaaaatcagaattgaaaagaaaaa
cataacagaaacagaaaattaaaaaaaaaaaaaaacatcaccagatacta
ctacaaaagcctatagtcaacaaaactggaaaatctacatgaaatgaatg
attttctagacatacaccaggtaccaaatttaaaccacaatcggatcaat
catttaaccatcccataaatcttaaagaaatagaagtagtcattaaaagt
ctcctaaccaataaaatagctgaggcccatatggttttagtgcagaatgc
taacagaacttcaaagaatggctaatataaagacttttcaaactattcca
aaatgtgtcctatttaaaaaattaaggtaagaagatgaagcagagaagtt
agtaatggctaagaaataactatcccagctagcaccaatttctgacattt
ttaatgatgctgtgttatgcaacacacaagagactagcataactttcctc
tttgaggttctatccagcagctgactgaattgacacagacagccatagac
aaacactaaacagaggttggagattcttatggagagtgggggaggaatga
ggccttgaaggggatggtaacccataggatgaccaagtccactaactgat
tctctgaagttctcgaactgaagcctcatcacttgacaattattgtcgac
atcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_124609959_124611067
seq2: B6Ng01-284H16.b_49_1152

seq1  GAATTCACGCAGATGTGGGACTGGAAGAGCTGAAAGTCCCATCTCTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGCAGATGTGGGACTGGAAGAGCTGAAAGTCCCATCTCTTGCT  50

seq1  CCAAAGGCACCTAGGAGAAGACTGGCTCCCATATGGTTAAGAAGAGGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGCACCTAGGAGAAGACTGGCTCCCATATGGTTAAGAAGAGGGTC  100

seq1  TCATTTTTCACCTCAACAGTGGCACACTTCCTCCAACAAAACCACACCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTCACCTCAACAGTGGCACACTTCCTCCAACAAAACCACACCTA  150

seq1  CTCCAACAAGATAACATCTACAAATAGAACAACTCTTGGGCCAAGAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACAAGATAACATCTACAAATAGAACAACTCTTGGGCCAAGAATAT  200

seq1  TCAAACCACAATCATGGATGCTAAATTAAATATTGAAACTGTCAATGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCACAATCATGGATGCTAAATTAAATATTGAAACTGTCAATGGTA  250

seq1  TAAGGCAAAGTTTCCTCTATGAGGCAGATTCAGGTTCAACTAGAATTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAAAGTTTCCTCTATGAGGCAGATTCAGGTTCAACTAGAATTTTG  300

seq1  AATTTTTGATGCAGAATCCAAATTCTATTCTAGGTACTCAAGCTCAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTGATGCAGAATCCAAATTCTATTCTAGGTACTCAAGCTCAAGGT  350

seq1  GTAATAGCTAATTTATTTTAGCCTCCTTTTTCAGATGCCTCTTTTACTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAGCTAATTTATTTTAGCCTCCTTTTTCAGATGCCTCTTTTACTAA  400

seq1  CCACTTAGTTTCTGTTAAACTGGTAGTTTCTATAAAGTCTGCTTCTAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAGTTTCTGTTAAACTGGTAGTTTCTATAAAGTCTGCTTCTAACT  450

seq1  TTAAAGAAAGATGCCAGGATGTGGTTTTTCCCTTTAAAATTAAACAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAAAGATGCCAGGATGTGGTTTTTCCCTTTAAAATTAAACAAATA  500

seq1  AACAACTACAACAACAACAAACCTGTAATCTGGAGATTCATAGTCAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTACAACAACAACAAACCTGTAATCTGGAGATTCATAGTCAAAAC  550

seq1  TAGGTCCCAGAATACCTAGGTGTGGTTACAGGTGGTAGAAATACACACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCCCAGAATACCTAGGTGTGGTTACAGGTGGTAGAAATACACACTT  600

seq1  TCAATTGGCTATAAACTGTGTCTGAATGGTTTTCTCTTGTGGGCTGTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGGCTATAAACTGTGTCTGAATGGTTTTCTCTTGTGGGCTGTCCA  650

seq1  CAGAGGAATAAAAGAGATTTAATGCATATAAGGATATCATAGAAAATACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAATAAAAGAGATTTAATGCATATAAGGATATCATAGAAAATACT  700

seq1  AAGCACAATTGCAAAACAGCTACGATTTTGAAACTATTTAAGTTTGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAATTGCAAAACAGCTACGATTTTGAAACTATTTAAGTTTGAAAA  750

seq1  TAAATGAATACATGCTAAATTGTAGTAATGTCTTCTAATAAATTGTTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAATACATGCTAAATTGTAGTAATGTCTTCTAATAAATTGTTTTC  800

seq1  CCACAGTTATAGTAAAACTATATCTATATGTTCAATAATTATAAAAATAT  850
      |||||||||||||||||||||||||||||||||                 
seq2  CCACAGTTATAGTAAAACTATATCTATATGTTCNNNNNNNNNNNNNNNNN  850

seq1  TCCAAATCTTAACTGATAGAAATGAAGTGGCCCAAAAATAATAACTTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATCTTAACTGATAGAAATGAAGTGGCCCAAAAATAATAACTTGAC  900

seq1  ATTATTCATACAAAATACATAATAAAATAACATTATTAAAAACTAGAGAC  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATTATTCATACAAAATACATAATAAAAT-ACATTATTAAAAACTAGAGAC  949

seq1  AGCAATTGCATATACATTTGTAATGAAAATATGAAAACACATGCAATTCA  1000
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGC-ATTGCATATACATTTGTAATGAAAATATGAAAACACATGCAATTCA  998

seq1  TGACAGTG-TTTTTTTGTTGCTGCTGTTGTTTTGAAATGAAAATGTGGAA  1049
      |||||||| |||||||||||||||||||| |||||||||||||||||| |
seq2  TGACAGTGTTTTTTTTGTTGCTGCTGTTG-TTTGAAATGAAAATGTGG-A  1046

seq1  ATGATGGCTATCTAATGACTACAATACAGCTTTATATTACAAACAACAAC  1099
      ||||| |||||||||||||||| ||||||||||||  ||| |||||||||
seq2  ATGATTGCTATCTAATGACTAC-ATACAGCTTTATTATAC-AACAACAAC  1094

seq1  AACAATAAAA  1109
      |||| |||||
seq2  AACATTAAAA  1104


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