BAC Information

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BAC

Clone NameB6Ng01-284P24
Chromosome14 (Build37)X (Build37)
Map Location 86,220,916 - 86,221,4258,043,031 - 8,043,874
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668603
Downstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284P24.bB6Ng01-284P24.g
ACCGA083561GA083562
length9881,116
definitionB6Ng01-284P24.b B6Ng01-284P24.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(86,220,916 - 86,221,425)(8,043,031 - 8,043,874)
sequence
gaattctttggaattttgatggggattgcattgaatatgtagattgcttt
tgataagatagccatttttgctatattgatcctgctaatccatgagcatg
ggagatctttccatcttctgagatcttctttaattttttttcttcagaga
cttaaagttcttatcttacagatctttcacttccttacttagagtcaggc
caaggtcttttatattatttgggactattgagaagggtgttgtgtcccta
atgtctttttcggcctgtttatcctttgtgtagagaaaggtcattgattt
gttagagttaattttatatccagctatttcattgaagctctttatcaggt
ttaggagttctctggtagaatttttagggtcacttatatatactatcata
tcatctacaaaaagtgatattttgacttcttcctttcaaatttgtatctc
cttgatctccttttattgtcgaattgctctggctaggacttcaagtacaa
tgttaaataggtgggaagaaagtgggcagccttgtctagtccctgatttt
agtgggattgcttccagattttcaccatttactttgatgttggctacggg
tttgctgtagattgcttttatcatgtttacgtatgggccttgaatttctg
atctttcaaagactgttatcatgaatgggtttggattttgtcaactgctt
taacacatctcatgagatgatcatgtgattttgtctttgagtttgtttat
ataatggattacattgatggatttctgtatattaaaccatccctgcaacc
ctggaatgaaacgtacttcatcagatggatgattgttttgatgtgttctt
gtattcgggttagcgggaatttttattgagtattttggcatcaatattca
taagggaaaattggttctgaagttcttctatctttggttggttctttctt
tggtttaggtatcagcagtaaatgtggcttcatagaat
gaattcagtaagaatgttgcccattcagtgatattcagaattgcctcttg
tatttcactatcacttggaataaaagccaagttgctcccatatacaggaa
tttacaatggtttaggaagtagatcaggctgtggtcttagagtattgcat
tattcatgagatggttagcttgaacggaactccctaattagaagcatgtg
ttaggtgtgaaagcccttgccctaggagtgtaaagacctcacacctggct
tctaagactacagctgaccttagatagggctgactttgtctcagttattt
tactgcccagttcctgccagtctttatgtttacatttctctgttttgtgt
aagagtcattaagcatccggtaacctcatttgtaccttgctaatatgtca
cctaacttccctattttcttctgtataaaaagtttgatcctcaatttgac
aaattacattcagattctacacaacctctcctgtgtgcatctgtctatca
tttcatccaacgctttgcccacctgtgactagagacccgttccacataga
caaaggggcccagagggcctgcggcacttccccccatctttcttctcccc
tgcacctctcccacccaggtccctctctccctctgcctccagtgattatt
gtcttcccccttctaagtgggattgaagcatcattgcttgggccttcttt
ctagttaaacttcttataatctatgtggtttatcctaggggttctgtaca
tttgggctaatatccgcttattatgagagaaccagctagacaaatgtatt
gtttagcatgcgcatagtggcatgtacacacacataagcagatcagaaat
gcatgtactggtagtagtatttaataaaagtaaatgattttagaccctct
agtacttcagcccctcatccaactgtatttggtactatcatcatctacct
acttctgatgactctctctttcatcttatatgggtcaaagaacactcaca
tggtcagcttgctctgaaagagtcttttgcctgagccctcctctctctgt
cccaaagcaaccattattctgcagtacaaattggagggtccgcagtttat
aagccagtatggtaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86220916_86221425
seq2: B6Ng01-284P24.b_521_1035 (reverse)

seq1  ATTCTATGAAGCCACAATTTCT-CTGATACCTAAAACACAGAAAGATCCA  49
      |||||||||||||||| || || |||||||||||| || ||||||| |||
seq2  ATTCTATGAAGCCACATTTACTGCTGATACCTAAACCAAAGAAAGAACCA  50

seq1  A-CAAAGATAG-AGAACTTCAG-ACCAA-TTTCCCTTATGAATATCGATG  95
      | ||||||||| |||||||||| ||||| |||||||||||||||| ||||
seq2  ACCAAAGATAGAAGAACTTCAGAACCAATTTTCCCTTATGAATATTGATG  100

seq1  CAAAAATACTCAAT-AAAATTCTCACTAA-CCGAATCCAAGAACACATTA  143
      | |||||||||||| ||||||| | |||| |||||| ||||||||||| |
seq2  CCAAAATACTCAATAAAAATTCCCGCTAACCCGAATACAAGAACACATCA  150

seq1  AAACAATCATCCATCCTGACCAAGTAGGATTTATTCCAGGGGTGCAGGGA  193
      |||||||||||||| ||||  ||||| | || ||||||||| ||||||||
seq2  AAACAATCATCCAT-CTGATGAAGTACGTTTCATTCCAGGGTTGCAGGGA  199

seq1  TGGTTGAATATACGGAAATCCATCAATGTAATCCATTATATAAACAAACT  243
      ||||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAATATACAGAAATCCATCAATGTAATCCATTATATAAACAAACT  249

seq1  CAAAGACAAAATCCACATGATCATCTCCTTAGATGCGGAAAAAGCATTCA  293
      |||||||||||| |||||||||||||| | |||||  |  |||||| |  
seq2  CAAAGACAAAAT-CACATGATCATCTCATGAGATG-TGTTAAAGCAGTTG  297

seq1  ACAGGATCCAACACCCATTCATGATAAAAGTCTTGGAAAGATCAGGAATT  343
      |||  |||||| ||||||||||||||| |||||| |||||||||| ||||
seq2  ACAAAATCCAA-ACCCATTCATGATAACAGTCTTTGAAAGATCAGAAATT  346

seq1  CAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGC  393
      |||||||||||| ||||||||||||||||||||||||||||||| |||||
seq2  CAAGGCCCATACGTAAACATGATAAAAGCAATCTACAGCAAACCCGTAGC  396

seq1  CAACATCAAAGTAAATGGTGAGAAGCTGGAAGAAATCCCACTAAAATCAG  443
      ||||||||||||||||||||| || ||||||| |||||||||||||||||
seq2  CAACATCAAAGTAAATGGTGAAAATCTGGAAGCAATCCCACTAAAATCAG  446

seq1  GGACTAGACAAGACTGCCCA--TTCTCCCTACCTATTCAACATTGTACTT  491
      |||||||||||| |||||||  |||| || ||||||| ||||||||||||
seq2  GGACTAGACAAGGCTGCCCACTTTCTTCCCACCTATTTAACATTGTACTT  496

seq1  GAAGTCCTAGCCAGAGCAA  510
      |||||||||||||||||||
seq2  GAAGTCCTAGCCAGAGCAA  515

seq1: chrX_8043031_8043874
seq2: B6Ng01-284P24.g_345_1180

seq1  TGACTTTGTCTCAGTTATTTTACTGCCCAGTTCCTGCCAGTCTTTATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTGTCTCAGTTATTTTACTGCCCAGTTCCTGCCAGTCTTTATGTT  50

seq1  TACATTTCTCTGTTTTGTGTAAGAGTCATTAAGCATCCGGTAACCTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCTCTGTTTTGTGTAAGAGTCATTAAGCATCCGGTAACCTCATT  100

seq1  TGTACCTTGCTAATATGTCACCTAACTTCCCTATTTTCTTCTGTATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCTTGCTAATATGTCACCTAACTTCCCTATTTTCTTCTGTATAAAA  150

seq1  AGTTTGATCCTCAATTTGACAAATTACATTCAGATTCTACACAACCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGATCCTCAATTTGACAAATTACATTCAGATTCTACACAACCTCTC  200

seq1  CTGTGTGCATCTGTCTATCATTTCATCCAACGCTTTGCCCACCTGTGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGCATCTGTCTATCATTTCATCCAACGCTTTGCCCACCTGTGACT  250

seq1  AGAGACCCGTTCCACATAGACAAAGGGGCCCAGAGGGCCTGCGGCACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCCGTTCCACATAGACAAAGGGGCCCAGAGGGCCTGCGGCACTTC  300

seq1  CCCCCATCTTTCTTCTCCCCTGCACCTCTCCCACCCAGGTCCCTCTCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATCTTTCTTCTCCCCTGCACCTCTCCCACCCAGGTCCCTCTCTCC  350

seq1  CTCTGCCTCCAGTGATTATTGTCTTCCCCCTTCTAAGTGGGATTGAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTCCAGTGATTATTGTCTTCCCCCTTCTAAGTGGGATTGAAGCA  400

seq1  TCATTGCTTGGGCCTTCTTTCTAGTTAAACTTCTTATAATCTATGTGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCTTGGGCCTTCTTTCTAGTTAAACTTCTTATAATCTATGTGGTT  450

seq1  TATCCTAGGGGTTCTGTACATTTGGGCTAATATCCGCTTATTATGAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTAGGGGTTCTGTACATTTGGGCTAATATCCGCTTATTATGAGAGA  500

seq1  ACCAGCTAGACAAATGTATTGTTTAGCATGCGCATAGTGGCATGTACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTAGACAAATGTATTGTTTAGCATGCGCATAGTGGCATGTACACA  550

seq1  CACATAAGCAGATCAGAAATGCATGTACTGGTAGTAGTATTTAATAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAGCAGATCAGAAATGCATGTACTGGTAGTAGTATTTAATAAAAG  600

seq1  TAAATGATTTTAAGACCCTCTAGTACTTCAGCCCCTCATCCAACTGTATT  650
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAAATGATTTT-AGACCCTCTAGTACTTCAGCCCCTCATCCAACTGTATT  649

seq1  TGGTACTTATCATCATCTTACCTACTTCTGATGGACTCTCTCCTTCATCT  700
      |||||| |||||||||| |||||||||||||| ||||||||| |||||| 
seq2  TGGTAC-TATCATCATC-TACCTACTTCTGAT-GACTCTCTCTTTCATC-  695

seq1  TTATATGGGTTCAAAGGAACCAACTCACATGGTCAGGCTTGCTCTGAAAG  750
      ||||||||| ||||| ||||  ||||||||||||| ||||||||||||||
seq2  TTATATGGG-TCAAA-GAAC--ACTCACATGGTCA-GCTTGCTCTGAAAG  740

seq1  AGTCTTTTTTGCTGAGCCCT-CTCTCTCTGTCCCAAAGCAA-CAATATTC  798
      |||| ||||  ||||||||| |||||||||||||||||||| || |||||
seq2  AGTC-TTTTGCCTGAGCCCTCCTCTCTCTGTCCCAAAGCAACCATTATTC  789

seq1  TGCAGTAC-AATTTGAGGGTCTGCAGTTTATAAGCAGTTATGGTAAG  844
      |||||||| |||| ||||||| |||||||||||||   |||||||||
seq2  TGCAGTACAAATTGGAGGGTCCGCAGTTTATAAGCCAGTATGGTAAG  836