BAC Information

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BAC

Clone NameB6Ng01-285I06
ChromosomeX (Build37)
Map Location 61,752,366 - 61,753,364
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666729, EG627470, 3830417A13Rik, Slitrk4
Downstream geneLOC100040011, Ctag2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285I06.bB6Ng01-285I06.g
ACCGA083947GA083948
length9951,208
definitionB6Ng01-285I06.b B6Ng01-285I06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccatgaaatttacaagttttttaatttctctatttatatgatat
acatttttcatattaatatttccatattaacagtttaaattgaattttgc
aatattaatagcaattacctttaaacttttgtctaacttttaatacttgt
tttatattagagtgtggttcttaggctggaaatatctaattgaagtcagt
tttatcatgcaacataaacatttatttttgttaatgaaacttgatatgat
aaatcatctactagagaatgaagtaaatatgcttttatgccgcttggtag
agtattgtattcttccttagattttatatcaacttggacagtgttgaata
attcacttaatactgcacaacttcccaaacaaaggccacgccttaagatt
ttacttctttgtttttggaccaaaatcctctccttgatttgatggtaagg
cgtggaaaacagttaacaaagtaaagaagactcgagtaaaaagtaaggaa
taaaatttgtcaggagatatctaggatagactaagactagcaagcggtaa
ttttggaagtggcccaccatgtttttgcatggttacaatgggtgggcttg
atgataagacccaaagagagttcatctcagaattgcttcttacagctaat
atgcctttcctgtcattattaaattaatatgataatccctagtccttagc
ccaccatgttggtaagattttctgaagatcaataaaagataatcttttat
gaattaatgttgtttagttgaattaatgatcttatagaattcctgatttg
attcaaataattttagaaacaaagttttaagagatggtcttagttgcttt
gctagaaagatgcaacagaattagaatcaagaatagagcatgcccacttc
tcatatagaaattaaagctgcataatagaaataagctttcatatcagcat
gcacttcttagcattcacatagtgtatgggtttggtgttgtggta

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagttttggagctgagatg
aaaggatggaccatgtagagacttgacatatccagggatccaccccataa
tcagcattcaaacgctgacaccattgcataccctagcaagattttattga
aaggacccagatgtagctatctctttgtgagactatgccggggcctagca
aacacagaagttgattgcttcacagtcagctaatgggatggatcacaggg
cttcctaatgggagggagctagagaaagaaacccaaggagcctaaaggga
atcttgctatccttatatggtggaacaacattatggaaccttaaccagta
cctggaagctcttggactcttagctgccatatgtatctaaaagattggcc
taatccggcccatcacttgaaagataaagacccatttgggacatggttaa
ccttgtaatgtctccagtataagcggaacgcttggccaataaaggggtga
gagatgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_61752366_61753364
seq2: B6Ng01-285I06.b_42_1036 (reverse)

seq1  TACCACAACACCAAACCCATACACTATTGTGAATGCTAAGAAGTGCATGC  50
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TACCACAACACCAAACCCATACACTA-TGTGAATGCTAAGAAGTGCATGC  49

seq1  TGATTATGAAAGCTTATTTCTTATTATGCAGCCTTTAATTTCTATATGAG  100
      ||| |||||||||||||||| |||||||||| ||||||||||||||||||
seq2  TGA-TATGAAAGCTTATTTC-TATTATGCAG-CTTTAATTTCTATATGAG  96

seq1  AAGTGGGCATGCTCTATTCTTGATTCTAATTCTGTTGCATCTTTCTAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGCATGCTCTATTCTTGATTCTAATTCTGTTGCATCTTTCTAGCA  146

seq1  AAGCAACTAAGACCATCTCTTAAAACTTTGTTTCTAAAATTATTTGAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACTAAGACCATCTCTTAAAACTTTGTTTCTAAAATTATTTGAATC  196

seq1  AAATCAGGAATTCTATAAGATCATTAATTCAACTAAACAACATTAATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGGAATTCTATAAGATCATTAATTCAACTAAACAACATTAATTCA  246

seq1  TAAAAGATTATCTTTTATTGATCTTCAGAAAATCTTACCAACATGGTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATTATCTTTTATTGATCTTCAGAAAATCTTACCAACATGGTGGG  296

seq1  CTAAGGACTAGGGATTATCATATTAATTTAATAATGACAGGAAAGGCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGACTAGGGATTATCATATTAATTTAATAATGACAGGAAAGGCATA  346

seq1  TTAGCTGTAAGAAGCAATTCTGAGATGAACTCTCTTTGGGTCTTATCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGTAAGAAGCAATTCTGAGATGAACTCTCTTTGGGTCTTATCATC  396

seq1  AAGCCCACCCATTGTAACCATGCAAAAACATGGTGGGCCACTTCCAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCACCCATTGTAACCATGCAAAAACATGGTGGGCCACTTCCAAAAT  446

seq1  TACCGCTTGCTAGTCTTAGTCTATCCTAGATATCTCCTGACAAATTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGCTTGCTAGTCTTAGTCTATCCTAGATATCTCCTGACAAATTTTAT  496

seq1  TCCTTACTTTTTACTCGAGTCTTCTTTACTTTGTTAACTGTTTTCCACGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACTTTTTACTCGAGTCTTCTTTACTTTGTTAACTGTTTTCCACGC  546

seq1  CTTACCATCAAATCAAGGAGAGGATTTTGGTCCAAAAACAAAGAAGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCATCAAATCAAGGAGAGGATTTTGGTCCAAAAACAAAGAAGTAAA  596

seq1  ATCTTAAGGCGTGGCCTTTGTTTGGGAAGTTGTGCAGTATTAAGTGAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAGGCGTGGCCTTTGTTTGGGAAGTTGTGCAGTATTAAGTGAATT  646

seq1  ATTCAACACTGTCCAAGTTGATATAAAATCTAAGGAAGAATACAATACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACACTGTCCAAGTTGATATAAAATCTAAGGAAGAATACAATACTC  696

seq1  TACCAAGCGGCATAAAAGCATATTTACTTCATTCTCTAGTAGATGATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGCGGCATAAAAGCATATTTACTTCATTCTCTAGTAGATGATTTA  746

seq1  TCATATCAAGTTTCATTAACAAAAATAAATGTTTATGTTGCATGATAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCAAGTTTCATTAACAAAAATAAATGTTTATGTTGCATGATAAAA  796

seq1  CTGACTTCAATTAGATATTTCCAGCCTAAGAACCACACTCTAATATAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTCAATTAGATATTTCCAGCCTAAGAACCACACTCTAATATAAAA  846

seq1  CAAGTATTAAAAGTTAGACAAAAGTTTAAAGGTAATTGCTATTAATATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATTAAAAGTTAGACAAAAGTTTAAAGGTAATTGCTATTAATATTG  896

seq1  CAAAATTCAATTTAAACTGTTAATATGGAAATATTAATATGAAAAATGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTCAATTTAAACTGTTAATATGGAAATATTAATATGAAAAATGTA  946

seq1  TATCATATAAATAGAGAAATTAAAAAACTTGTAAATTTCATGGGAATTC  999
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATAAATAGAGAAATTAAAAAACTTGTAAATTTCATGGGAATTC  995


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