BAC Information

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BAC

Clone NameB6Ng01-285K10
ChromosomeX (Build37)
Map Location 82,579,344 - 82,580,463
singlet/doubletsinglet
Overlap genenone
Upstream geneDmd, LOC100042306, LOC100042296, LOC669833, 1600014K23Rik
Downstream geneMap3k7ip3, Gyk, LOC100042350, LOC629340, LOC100041562, 5430427O19Rik, 1700072E05Rik, Nr0b1, CN716893, LOC667841, LOC236427, EG667852, EG436212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285K10.bB6Ng01-285K10.g
ACCGA084046GA084047
length1,1881,105
definitionB6Ng01-285K10.b B6Ng01-285K10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaatggctgtgaagcacctgaaaaaatg
ttcaacatccttaatcatcaggggaatgcaaatcaaaacaaccctgagat
tccacttcacaccagtcagaatggtaaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgctgttt
ggattgcaagctggtacaaccactttggaaatcagtttggcggttcctca
gaaaattggacatggcactactggaggatccagcaataccactactgggc
atatacccagaagatgctccaacttgtaataaggacacatgctctactat
gttcatagtagccttatttataatagccagaagctggaaagaacacagat
gtacctcaacagaggaatgtatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaacaatgaatttatgaaagtcttagacaa
atggatggatctggaggatgtcatcctaagtgaggtaacacaatcacaaa
agaacacacatgatatgcactcactgataagtggatattagcccataatc
tcagaatacccaagataaaatttgcaaaacacataaaactcaagaaggaa
gaccaaagtttggatacttcgatccttcttagaaggtggaacaaagtacc
catggaaggagttacagagacaaagtttggatcagagactgaaggaatga
ctatccagagactgccccacttgaggatccatcccataaacaaccattaa
acccagacattattgcagatgccaacaagagctagatgacaggagcctga
tgaagctgtctcctgaggggctctcccagtgcctgacaaatacagccatc
catttggatgaagcacagggtccccaattgaaggaacttagaaaaagtta
cccaggagctaaaggggttttgcagttcccattggagggaacatccaatt
attgacttacccagtacccccagagctcccttgaactaaacacttaattc
aaagaaaaactcatgggggaacttgttggctcttatctgccatatgttag
cagacgatggctagttcggtcatccatgggggaagaagagtccttgatct
tgggaggttccatggcccccatttataaggggaattgc
gaattccttactttaacaagatcttccattgattttgtgcacatcaaagt
ttaagaaatattggcacaatgaattagctgctttggtgttttaaatactc
tggcacagtgccaggtagtcataccacagagccaaaggaaaaaatatgca
catttgtgtaccatttaggaaactgtagtatctatagtacaaaacaaaca
agttaacattgttgaagttatttctggtacttcttcccagtcccgtgctc
ccagatataagacagactcaaaatatatttacaaataccttggccattta
gataggctcttctctgactagatcataacctaaggtaactcttttattct
aatgtaattctgccatgtagctggctacctttgctcaggtagcatgcatt
catcttgtcacacgtttctgggtgaatattatgtggcttgttctatccca
gaattctttctacctccaggatgttccatcttctattctaccctttccta
taggccataggatttttttaaatgacaggtgatgcattcatacaatacac
taaatgttctctctacagaacacgcacacaaccacacacaatcacacaca
cagctgtacgtgtacctgtaaaacattatgtggttcaatacaactagtaa
tgctatcatccttgaattgtgtctaactgataactggaacaaatcaatca
gtaagtattaccatttgtccaactttggtttctagagaggacactggaga
tggagctagaaaagtacaaaaaaatcagtttccatcagagagctgagtga
agaaaagaaattagtattgattgaacacctactgtgatagggactgctag
gtagaaaactatcttgatgaaatagactctaaggattccatcatcaggca
agatatcccaagggaataagaaacagaaaagctcacagaccaattatgat
tttcaaatcatgtattttagtgattaaaatatgcagtgaaagcaaagaaa
ggagatgggttgcttacacatttgcagaggtgtaatggaatgagaagaga
acattctttgattcatgatccacatggttcacccagctgcttaagatgtg
tagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_82579344_82580463
seq2: B6Ng01-285K10.g_66_1170

seq1  GAATTCCTTACTTTAACAAGATCTTCCATTGATTTTGTGCACATCAAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTACTTTAACAAGATCTTCCATTGATTTTGTGCACATCAAAGT  50

seq1  TTAAGAAATATTGGCACAATGAATTAGCTGCTTTGGTGTTTTAAATACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAATATTGGCACAATGAATTAGCTGCTTTGGTGTTTTAAATACTC  100

seq1  TGGCACAGTGCCAGGTAGTCATACCACAGAGCCAAAGGAAAAAATATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACAGTGCCAGGTAGTCATACCACAGAGCCAAAGGAAAAAATATGCA  150

seq1  CATTTGTGTACCATTTAGGAAACTGTAGTATCTATAGTACAAAACAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTGTACCATTTAGGAAACTGTAGTATCTATAGTACAAAACAAACA  200

seq1  AGTTAACATTGTTGAAGTTATTTCTGGTACTTCTTCCCAGTCCCGTGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACATTGTTGAAGTTATTTCTGGTACTTCTTCCCAGTCCCGTGCTC  250

seq1  CCAGATATAAGACAGACTCAAAATATATTTACAAATACCTTGGCCATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATATAAGACAGACTCAAAATATATTTACAAATACCTTGGCCATTTA  300

seq1  GATAGGCTCTTCTCTGACTAGATCATAACCTAAGGTAACTCTTTTATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGCTCTTCTCTGACTAGATCATAACCTAAGGTAACTCTTTTATTCT  350

seq1  AATGTAATTCTGCCATGTAGCTGGCTACCTTTGCTCAGGTAGCATGCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAATTCTGCCATGTAGCTGGCTACCTTTGCTCAGGTAGCATGCATT  400

seq1  CATCTTGTCACACGTTTCTGGGTGAATATTATGTGGCTTGTTCTATCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGTCACACGTTTCTGGGTGAATATTATGTGGCTTGTTCTATCCCA  450

seq1  GAATTCTTTCTACCTCCAGGATGTTCCATCTTCTATTCTACCCTTTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTACCTCCAGGATGTTCCATCTTCTATTCTACCCTTTCCTA  500

seq1  TAGGCCATAGGATTTTTTTAAATGACAGGTGATGCATTCATACAATACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCATAGGATTTTTTTAAATGACAGGTGATGCATTCATACAATACAC  550

seq1  TAAATGTTCTCTCTACAGAACACGCACACAACCACACACAATCACACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTCTCTCTACAGAACACGCACACAACCACACACAATCACACACA  600

seq1  CAGCTGTACGTGTACCTGTAAAACATTATGTGGTTCAATACAACTAGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTACGTGTACCTGTAAAACATTATGTGGTTCAATACAACTAGTAA  650

seq1  TGCTATCATCCTTGAATTGTGTCTAACTGATAACTGGAACAAATCAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCATCCTTGAATTGTGTCTAACTGATAACTGGAACAAATCAATCA  700

seq1  GTAAGTATTACCATTTGTCCAACTTTGGTTTCTAGAGAGGACACTGGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTATTACCATTTGTCCAACTTTGGTTTCTAGAGAGGACACTGGAGA  750

seq1  TGGAGCTAGAAAAGTACAAAAAAATCAGTTTCCATCAGAGAGCTGAGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTAGAAAAGTACAAAAAAATCAGTTTCCATCAGAGAGCTGAGTGA  800

seq1  AGAAAAGAAATTAGTATTGATTGAACACCTACTGTGATAGGGACTGCTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAATTAGTATTGATTGAACACCTACTGTGATAGGGACTGCTAG  850

seq1  GTAGAAAACTATCTTGATGAAATAGACTCTAAGGATTCCATCATCAGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAACTATCTTGATGAAATAGACTCTAAGGATTCCATCATCAGGCA  900

seq1  AGATATCCCAA-GGAATAAGAAACAGAAAAGCTCACAGACCAAATTATGA  949
      ||||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  AGATATCCCAAGGGAATAAGAAACAGAAAAGCTCACAGACC-AATTATGA  949

seq1  TTTTCAAATCATGTAATTTTAGTTGATTTAAAATATGCAGTGAAAAGCAA  999
      |||||||||||||| ||||||| ||| ||||||||||||||| ||||| |
seq2  TTTTCAAATCATGT-ATTTTAG-TGA-TTAAAATATGCAGTG-AAAGC-A  994

seq1  AAGGAAAGAGATGGGTTGGCTTAACACATTTGCCAGAGGGTGTAAATGGA  1049
      ||| || |||||||||| |||| ||||||||| |||| ||||| ||||||
seq2  AAGAAAGGAGATGGGTT-GCTT-ACACATTTG-CAGA-GGTGT-AATGGA  1039

seq1  ATGGAGAGAGAACATTCTTTGAATCATGGATTCCACATGGTTCACCCAGC  1099
      |||   |||||||||||||||| |||||   |||||||||||||||||| 
seq2  ATGAGAAGAGAACATTCTTTGATTCATG--ATCCACATGGTTCACCCAG-  1086

seq1  CTGCTAAAGATGTGGTTAGAA  1120
      ||||| ||||||||  |||||
seq2  CTGCTTAAGATGTG--TAGAA  1105