BAC Information

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BAC

Clone NameB6Ng01-287P02
ChromosomeX (Build37)
Map Location 115,031,366 - 115,032,167
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665045, LOC100039319, LOC624284, LOC665066, EG624388
Downstream geneENSMUSG00000072994, LOC100039551, Tgifx1, LOC665087
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287P02.bB6Ng01-287P02.g
ACCGA085734GA085735
length1,1411,117
definitionB6Ng01-287P02.b B6Ng01-287P02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgacaactttctacatataagaagtatcttgtcattgctggac
tagccacaccctctcacattgaaggcaggtaaggcagcacagttagtcta
actggatccacaggatgaccaccaggtcagaacagcccagtgtggatttt
ttttggggggatgcacaggaagaagaagcaaaaatagttttagtattttt
gttgtaagtggattctagtaaatagttatatattacatactacatgataa
aatctctccaatgtgttgttttaaataaattgagatagctttatttttaa
aaactgttttttatatagactatatatctatagatatagtatttttatat
agttaacatgttaccttatgaagaaatacatttcttggtatgtatgtaat
tgcattttctctacatattaataaattgagaaaatcatcattcaaactta
tgcacatacacatataaccacatattctctatgatacctattattgaaaa
tattaaaataatcataattttattgccacagaccccttttggtccctgtc
tgcatagaatgggtctctagttgcaggtagacaaggagacagaagcaaca
tgagagattgtgtagaatctgagtgtattgtcacaaagtgaacaccagtc
ttatataatatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacactgacaccattgcatacactagcaagattttattgaaag
gacccagatgtagctgtctcttgtgagactatgcccgggccctagcaaac
acagaagtggatgctcacagtcagctaatggaatggatcatagggctccc
aatggaggagctagagaaagtagccaaggagctaaagggatctgcaaccc
tatatgtgaacacattatgaactaaccagtaccccggagctcttgactct
agctgcataatatatcaaaagattgtctagtcgccattcactgcaaagga
aggtcccaatgcacttgcaactttaattgtcccagtaaggaaccccaggc
cctaaaatgggggaagttgtttgggccaggggattggtggg

gaattctgcattaaaaccatctggtcctgggcttttcttcgttaggagac
ttttaacaactgctgctatttctttagcggttatgggaatgtttagatgg
tttatctgatcctgatttaactttggtacctggtatctgtctagaaaatt
gtccattccatccagattttccagttttattaagcataggcttttgtaat
aggatttgatgagtttctttttaatttcttcagtttctgttgttatgtcc
cccttttcattttttattttattaatttggatactatctctgtgccctgt
ggttactttggctaagggtttatttatcgtgttcgttttctcaaagaatc
agtttctattattttatctttgtatagttatttttgtttctatttggttg
attctagctctgaatttgatttcctgtgccactggcttaacagggttcct
ttgtccctggattccctgggatcccagtaactcctgttttggggacagat
ttgtggtctcctcatctatgatccttcgtggcttagaggtgttagagctc
ctgggcatccagtttcctctaggtgttatgggattgggtgcagagctaga
gcccaaggtctactcagtgcaccagctcagacctgaaggtgatgtcctca
ttcttaattgctgaatagtatttcattgtaaaaataaaccaaattttctg
tatccacccttccattgtgaaatatctgggttgtttggagcttctggcta
tcacaaatgaggcaatattaatttcatcatataacatttgtcctgcatag
cgtggctattttcattttgcatttgctttcatcaatactgaaacaagaaa
agttgcattgatctgattattttttgcataaaaaaaatcagttttactat
atacttcagtattttgaaagaaaagcctctcatagggtggtggaattact
aggagatatggccttgttgaggatttatggcccttgatggaggagtttgc
cactgtgggggtgcagatctatgaggttttcaatgcctcaggtcagatcc
aattaactcactcctctgctgccttcagattccaatgtagactcttaatc
aaccgttccagcaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_115031366_115032167
seq2: B6Ng01-287P02.g_380_1183

seq1  AAGGGTTTATTTATCGTGTTCGTTTTCTCAAAGAATCAGTTTCTATTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTTATTTATCGTGTTCGTTTTCTCAAAGAATCAGTTTCTATTATT  50

seq1  TTATCTTTGTATAGTTATTTTTGTTTCTATTTGGTTGATTCTAGCTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTGTATAGTTATTTTTGTTTCTATTTGGTTGATTCTAGCTCTGA  100

seq1  ATTTGATTTCCTGTGCCACTGGCTTAACAGGGTTCCTTTGTCCCTGGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTTCCTGTGCCACTGGCTTAACAGGGTTCCTTTGTCCCTGGATT  150

seq1  CCCTGGGATCCCAGTAACTCCTGTTTTGGGGACAGATTTGTGGTCTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGATCCCAGTAACTCCTGTTTTGGGGACAGATTTGTGGTCTCCTC  200

seq1  ATCTATGATCCTTCGTGGCTTAGAGGTGTTAGAGCTCCTGGGCATCCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGATCCTTCGTGGCTTAGAGGTGTTAGAGCTCCTGGGCATCCAGT  250

seq1  TTCCTCTAGGTGTTATGGGATTGGGTGCAGAGCTAGAGCCCAAGGTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTAGGTGTTATGGGATTGGGTGCAGAGCTAGAGCCCAAGGTCTAC  300

seq1  TCAGTGCACCAGCTCAGACCTGAAGGTGATGTCCTCATTCTTAATTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCACCAGCTCAGACCTGAAGGTGATGTCCTCATTCTTAATTGCTG  350

seq1  AATAGTATTTCATTGTAAAAATAAACCAAATTTTCTGTATCCACCCTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTATTTCATTGTAAAAATAAACCAAATTTTCTGTATCCACCCTTCC  400

seq1  ATTGTGAAATATCTGGGTTGTTTGGAGCTTCTGGCTATCACAAATGAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAAATATCTGGGTTGTTTGGAGCTTCTGGCTATCACAAATGAGGC  450

seq1  AATATTAATTTCATCATATAACATTTGTCCTGCATAGCGTGGCTATTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAATTTCATCATATAACATTTGTCCTGCATAGCGTGGCTATTTTC  500

seq1  ATTTTGCATTTGCTTTCATCAATACTGAAACAAGAAAAGTTGCATTGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCATTTGCTTTCATCAATACTGAAACAAGAAAAGTTGCATTGATC  550

seq1  TGATTA-TTTTTGCATAAAAAAAATCAGTTTTACTATATACTTCAGTATT  599
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATTTTTTGCATAAAAAAAATCAGTTTTACTATATACTTCAGTATT  600

seq1  TTGAAAGAAAAGCCTCTCATAGGGT-GTGGAATTACTAGGAGATATGGCC  648
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTGAAAGAAAAGCCTCTCATAGGGTGGTGGAATTACTAGGAGATATGGCC  650

seq1  TTGTTGAAGGATTTATGG-CCTTGATGGAGGAAGTTTGCCACTGT-GGGG  696
      |||||| ||||||||||| |||||||||||| ||||||||||||| ||||
seq2  TTGTTG-AGGATTTATGGCCCTTGATGGAGG-AGTTTGCCACTGTGGGGG  698

seq1  TGCAGATCTATGA-GTTTTCAAATGCTCAAGTCAGGTCCAATTTTACTCA  745
      ||||||||||||| ||||||||   |||| ||||| ||||| || |||||
seq2  TGCAGATCTATGAGGTTTTCAATGCCTCAGGTCAGATCCAA-TTAACTCA  747

seq1  CTCTCTTGCTGCCTACAGATTCAAATGTAGAACTC-TCATCTACCCTTCC  794
      |||   |||||||| ||||||| ||||||| |||| | ||| ||| ||||
seq2  CTCCTCTGCTGCCTTCAGATTCCAATGTAG-ACTCTTAATCAACCGTTCC  796

seq1  AGCACCAT  802
      ||||||||
seq2  AGCACCAT  804


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