BAC Information

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BAC

Clone NameB6Ng01-288D05
ChromosomeX (Build37)
Map Location 150,182,702 - 150,183,414
singlet/doubletsinglet
Overlap genenone
Upstream geneShroom2, Gpr143, LOC100039874, LOC667147, EG624124, Usp51, LOC635253, Mageh1, EG385454, EG436240, Rragb, Klf8, LOC100039932, EG635136, Ubqln2, Cypt3, LOC100039998, LOC667241, Kctd12b, 2210013O21Rik
Downstream geneSmt3h1-ps, Spin2, 4921511M17Rik, OTTMUSG00000019268, LOC625650, LOC100040020, EG546397, OTTMUSG00000019256, EG434874, LOC635580, EG625767, LOC270665, LOC100040076, 4930524N10Rik, EG434879, LOC667313, 4930542N07Rik, EG434881, LOC100040899, LOC667331
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288D05.bB6Ng01-288D05.g
ACCGA085927GA085928
length717408
definitionB6Ng01-288D05.b B6Ng01-288D05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtagaccaggctggccttgaactcagagatccacctgcc
tctgcctcccgagtgctgggattaaaggcgtgcgccaccacgcccggctg
gggtgctgtctcttaatggaacatctgtatacactaccttctcctaaggc
ttagggaatgatgtgggagaggtggatggggaaaaaaactacagtaaaag
aaagatgtggaataagggaggaagaaggcatgaggtatggtgtaatcaga
tcaatgaagtgaaaaattctatggaacaagagtattgaattcggtgttac
agtttgaatgtgaaacatcccttagaggtgtatgtgttgaagggacagtc
cctagtcagtggcactattttgaagtgtgctgaagactttagaagattgg
gcctaccaagaagtagctccagcgtgcttttgaagtttcgtgtcctgttc
ctggtgcttttcctgtgtctttgtgcttcccggccattatggccactatg
agatgaacacctggctcctcccacacctttccaacttggtgctttgccat
gcctcaggcttaaaagcaacagagctagttagctgtgcactaaaacctct
gaaaccacaagccaaaatacataataaacaaacagttaataacccctccc
ttctttgttgttttaaaatttattagccaagaaatggaaaaaccctagca
tacacctagaaagcggg
atcccatatacagtaatcaaacccagacactattatggatgcaaaaatgt
acatgctgacaggagtctgatatagctgtctcctgagaggccctgccaga
gccttacaaatacagagttagatgatcacagccaaccatttgactgagtg
cggggggtccccagtagtggagttagacaaaggactgaaggaattggagg
agtttccaaccccatagaaagaacaacaatatcaaccaaccagacccccc
ctccccaagaactcccagggactaagccatcaacaaaggagtacacatgg
ctccaacagcatatgtagcagaggatggccttgtcatgcatcaataggag
aaaaggcccttggtcctatgccccagtgtaggggaattaagggtggggta
gtgggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_150182702_150183414
seq2: B6Ng01-288D05.b_46_761

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAGATCCACCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAGATCCACCTGCC  50

seq1  TCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCACGCCCGGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCACGCCCGGCTG  100

seq1  GGGTGCTGTCTCTTAATGGAACATCTGTATACACTACCTTCTCCTAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTGTCTCTTAATGGAACATCTGTATACACTACCTTCTCCTAAGGC  150

seq1  TTAGGGAATGATGTGGGAGAGGTGGATGGGGAAAAAAACTACAGTAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGAATGATGTGGGAGAGGTGGATGGGGAAAAAAACTACAGTAAAAG  200

seq1  AAAGATGTGGAATAAGGGAGGAAGAAGGCATGAGGTATGGTGTAATCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGTGGAATAAGGGAGGAAGAAGGCATGAGGTATGGTGTAATCAGA  250

seq1  TCAATGAAGTGAAAAATTCTATGGAACAAGAGTATTGAATTCGGTGTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGAAGTGAAAAATTCTATGGAACAAGAGTATTGAATTCGGTGTTAC  300

seq1  AGTTTGAATGTGAAACATCCCTTAGAGGTGTATGTGTTGAAGGGACAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAATGTGAAACATCCCTTAGAGGTGTATGTGTTGAAGGGACAGTC  350

seq1  CCTAGTCAGTGGCACTATTTTGAAGTGTGCTGAAGACTTTAGAAGATTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTCAGTGGCACTATTTTGAAGTGTGCTGAAGACTTTAGAAGATTGG  400

seq1  GCCTACCAAGAAGTAGCTCCAGCGTGCTTTTGAAGTTTCGTGTCCTGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACCAAGAAGTAGCTCCAGCGTGCTTTTGAAGTTTCGTGTCCTGTTC  450

seq1  CTGGTGCTTTTCCTGTGTCTTTGTGCTTCCCGGCCATTATGGCCACTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCTTTTCCTGTGTCTTTGTGCTTCCCGGCCATTATGGCCACTATG  500

seq1  AGATGAACACCTGGCTCCTCCCACACCTTTCCAACTTGGTGCTTTGCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAACACCTGGCTCCTCCCACACCTTTCCAACTTGGTGCTTTGCCAT  550

seq1  GCCTCAGGCTTAAAAGCAACAGAGCTAGTTAGCTGTGCACTAAAACCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGCTTAAAAGCAACAGAGCTAGTTAGCTGTGCACTAAAACCTCT  600

seq1  GAAACCACAAGCCAAAATACATAATAAACAAACAG-TAATAACCCCTCCC  649
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAAACCACAAGCCAAAATACATAATAAACAAACAGTTAATAACCCCTCCC  650

seq1  TTCTTTGTTGTTTTAAAATTTATTAGCCAAGAAATGG-AAAACCCTAGCA  698
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTCTTTGTTGTTTTAAAATTTATTAGCCAAGAAATGGAAAAACCCTAGCA  700

seq1  TACACCTAG-AAGCGG  713
      ||||||||| ||||||
seq2  TACACCTAGAAAGCGG  716