MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-288L12
Chromosome	X (Build37)
Map Location	143,083,396 - 143,084,516
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC623697, LOC623731, LOC237096, LOC100039558, EG666730
Downstream gene	EG245663, Htr2c, Il13ra2, V1rb10, Lrch2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC623697 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623697
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC623731 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623731
definition	note : ribosomal RNA processing 15 homolog (S. cerevisiae) pseudogene pseudo : _no_value

name	LOC237096 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:237096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100039558 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 293 ESTs, 27 Proteins pseudo : _no_value

name	EG666730 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666730 MGI:3647364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 86 ESTs, 4 Proteins pseudo : _no_value

name	EG245663 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245663 MGI:3646769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	Htr2c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15560 MGI:96281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il13ra2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16165 MGI:1277954
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	V1rb10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:113867 MGI:2148521
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrch2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210297 MGI:2147870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htr2c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373665 GeneID:15560 MGI:96281
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 2C transcript_id : NM_008312.3

name	Il13ra2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345552 GeneID:16165 MGI:1277954
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 13 receptor, alpha 2 transcript_id : NM_008356.2

name	V1rb10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118200340 GeneID:113867 MGI:2148521
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, B10 transcript_id : NM_053240.2

name	Lrch2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487174 GeneID:210297 MGI:2147870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine-rich repeats and calponin homology (CH) domain containing 2 transcript_id : NM_001081173.1

name	Htr2c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542977 CCDS:CCDS30459.1 GeneID:15560 MGI:96281
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004993 - serotonin receptor activity [Evidence ISS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0048016 - inositol phosphate-mediated signaling [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : 5-HT2C receptor; snoRNA MBI-36 product : 5-hydroxytryptamine (serotonin) receptor 2C protein_id : NP_032338.2

name	Il13ra2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680405 CCDS:CCDS30460.1 GeneID:16165 MGI:1277954
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0004907 - interleukin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA] codon_start : 1 product : interleukin 13 receptor, alpha 2 protein_id : NP_032382.1

name	V1rb10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118200341 GeneID:113867 MGI:2148521
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0016503 - pheromone receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] [Evidence ISS]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence IEA]; GO:0007606 - sensory perception of chemical stimulus [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : vomeronasal 1 receptor, B10 protein_id : NP_444470.2

name	Lrch2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487175 GeneID:210297 MGI:2147870
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine-rich repeats and calponin homology (CH) domain containing 2 protein_id : NP_001074642.1

name	LOC623697 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623697
definition	number : 1 pseudo : _no_value

name	LOC237096 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:237096
definition	number : 1 pseudo : _no_value

name	EG245663 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:245663
definition	number : 1 pseudo : _no_value

name	EG245663 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:245663
definition	number : 2 pseudo : _no_value

name	LOC100039558 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272428 GeneID:100039558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 293 ESTs, 27 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_030948.1

name	EG666730 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272429 GeneID:666730 MGI:3647364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 86 ESTs, 4 Proteins product : predicted gene, EG666730 pseudo : _no_value transcript_id : XR_001912.2

clone name	MSMg01-502A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082F03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-081I18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159E17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-360F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157L09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-366B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080M22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-209C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175M06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-090H04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-081E04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-328P16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-350H24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-356A02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-361E24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-416F21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-346B20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-506I17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-527N13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-509F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240B17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-288L12.b	B6Ng01-288L12.g
ACC	GA086310	GA086311
length	1,183	1,127
definition	B6Ng01-288L12.b	B6Ng01-288L12.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt gagtttgtttatataatggattacattgatggattttcgtatattaaacc atccctgcatccctggaataaaacctacttggtcaggatggatgattgct ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc atcgatgttcataagagaaattggtctgaagttctctatctttgttggat ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg gtcctgggctttttttggctgggagactattaataactgcttctatttct ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga atagttcttcttgtttccacttggttgatttcacccctgagtttgattat ttcctgccgtctactcctcttgggtgaatttgcttccttttttttctaga gcttttagatgtgttgtcaagctgctagtatgtgctctctcccgtttctt cttggaggcactcagagctatgagtttccctcttagaaatgatttcattg tgtcccaaaaggtttggggtacgttgtggcttcatttcattaaactctaa aagtcttattcttcttattcttccttgacagtatcattggagaagaatgt tgtttcagttccacggtggaggtgtggcttcattatctcatctatggtct ggctctcttaaagaacactggtgtgtggaccct	gaattctttgttattctttttcccataatttttatggaatatatttttgg atatgaccagagaaatattttaaaaactggaattcattagctgaatgtaa ggtaatagtattaatggaaggttctttaatgaggcatagaaaaggataac ctaatgagagttgataattttcacttggatgtggtatgttggagtcatga caaaattttataaaggcaaaatggaatataacggccttggagtcaaagct gggttggttatattattgatgtaagaatcctaaaggaacagatggcactg taaaactcagcctttacttttgcttttgcccttcatgccaaaaataaggg gtaggaggagtgattcctgggccgtcaagcttaggctgagactgcagtat tcatttgcttaaatataagtcaaagtggcagttccagtttctcagccatc aagtagtctttatgtgatcacacagtagtaatccatttctcacactctgt ggaaaagcaatgtaacgtgaaatccccttcacaattcatttttaggatga cattgaccactgaggtatcaactccaaaatttgtttttgtgcaaactaga aaagttcccattttcttcaacagttttcattgctgaagtttaacttgggg ttatcattctagattggcctagcaacttcatgtaagctttctgttaagtg aaggttatgaaatggtggagagaaatttcctaaaggatactgatctgaaa tataaattcctgtaagtttctattgcaaatggaaatgtattacaccaggg aagaaagataattgtcttttcatcaggctcacatccttttatcactatca caatatgagacattacaatattactaatttggcactttaagtgatagagt ttaagctaatagaaagtttaacacagtcccaaaacatgtcagatatctag aagcatgtgtgaaaattcttttgtcacccaccattaattattcaaacact ctcaacatcctaatggagtgatattccttgggaaatgtggcaggataaca gaagaaccttgtttggaattggtttaatgtggttttctgcttaatatagc actatttcatttacatatgccttaatc
quality values	Open. Hide. 62 31 23 31 62 62 62 47 62 32 39 62 62 62 62 62 26 10 62 62 62 62 62 49 49 44 59 59 59 47 59 62 39 24 28 28 27 23 29 40 28 27 43 38 54 59 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 59 62 62 59 49 56 59 59 33 28 46 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 54 54 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 56 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 56 54 54 59 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 62 62 54 49 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 42 62 54 62 62 62 62 58 58 58 58 58 54 58 54 58 58 44 49 35 58 58 58 58 58 58 58 54 58 58 58 58 58 54 41 58 58 54 54 58 58 58 58 58 58 54 54 54 58 58 58 58 58 54 54 58 58 54 58 52 58 54 54 58 58 52 41 6 31 45 52 58 54 52 54 58 58 58 58 58 58 49 42 48 58 53 58 58 47 58 46 40 51 58 58 58 58 58 46 58 58 58 53 58 53 53 58 51 58 58 53 58 58 58 58 46 58 40 58 58 34 58 37 47 58 58 58 51 39 58 58 52 58 52 58 58 58 58 47 51 31 58 58 58 53 58 51 52 39 58 36 36 58 51 58 50 58 51 50 41 52 53 58 52 58 51 51 58 58 51 58 58 54 40 34 50 58 51 58 54 50 53 32 58 58 58 53 38 50 42 52 53 51 39 41 49 42 19 58 54 54 51 45 50 54 52 49 49 52 41 44 54 51 52 54 35 42 42 53 52 51 37 45 51 45 52 40 49 52 32 50 11 49 42 27 54 42 45 40 54 53 53 52 46 36 33 54 30 25 35 37 40 48 36 47 52 53 37 24 54 44 37 53 35 23 54 37 46 53 53 53 53 53 51 32 47 52 15 40 46 21 45 35 53 22 46 52 41 53 34 32 35 46 32 34 45 32 29 53 36 31 46 37 32 51 25 51 29 51 43 32 41 30 16 19 13 13 46 30 33 21 51 46 30 29 30 46 46 31 31 42 46 17 46 51 17 27 34 29 31 30 24 46 43 42 42 31 42 31 42 38 27 46 32 33 38 31 42 42 34 46 31 23 42 46 46 24 31 28 41 16 46 31 20 31 31 31 33 33 21 46 46 48 46 46 48 30 31 23 31 26 34 23 31 22 46 46 31 32 20 43 26 36 30 38 32 38 31 18 29 20 22 31 37 42 38 33 29 32 20 9 13 19 31 25 31 37 32 36 32 31 30 31 36 29 17 24 44 26 31 13 20 31 18 20 17 25 15 10 13 10 17 21 34 33 24 21 37 22 34 34 24 34 32 33 21 27 39 25 20 43 24 11 28 31 10 17 16 29 48 28 33 34 34 26 47 18 28 26 22 22 18 6 18 10 27 30 28 10 28 40 20 9 19 11 25 19 7 34 34 18 7 21 28 11 13 15 26 20 19 21 11 10 16 22 26 22 47 28 8 16 11 13 3 19 15 23 18 28 17 5 31 22 6 12 17 7 11 6 9 3 5 9 22 22 14 9 15 3 9 14 13 11 11 10 17 14 8 21 21 16 4 3 3 15 20 15 19 13 11 7 5 9 4 6 16 4 2 3 1 4 10 9 11 6 16 13 18 10 9 15 8 11 12 8 9 4 4 6 6 4 8 8 6 4 8 15 4 9 3 3 3 3 2 2 9 2 8 2 3 5 9 18 20 7 10 15 6 7 16 16 6 6 3 2 2 6 5 18 4 3 9 17 17 4 2 4 7 8 23 5 3 6 8 5 5 4 6 14 5 3 5 10 3 4	Open. Hide. 62 47 42 47 62 62 62 62 62 62 62 32 35 32 31 32 27 38 38 49 43 46 38 29 20 37 43 59 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 49 46 54 28 46 56 54 56 59 62 62 54 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 52 54 51 58 58 58 58 54 58 58 58 58 54 54 58 58 54 41 58 58 52 52 58 58 58 45 54 54 54 58 58 58 45 41 58 58 49 58 58 52 58 58 58 58 46 42 58 58 58 51 58 58 51 53 58 58 58 58 58 41 58 51 50 58 47 51 53 54 53 58 58 58 58 36 46 54 53 58 48 50 58 58 58 58 54 52 51 49 30 54 51 53 58 52 58 58 58 53 52 54 58 58 53 58 51 58 54 52 53 58 49 50 49 51 54 58 58 51 58 51 35 58 51 40 53 43 47 58 51 49 49 53 41 32 54 58 31 39 58 49 51 21 46 37 50 52 53 53 53 41 51 51 50 49 51 42 51 46 54 53 53 49 51 40 42 35 54 42 53 39 35 51 32 38 26 50 37 41 50 54 54 49 34 54 40 38 54 40 54 34 54 35 32 54 39 52 54 45 45 53 45 40 54 46 37 51 33 28 37 39 45 51 34 40 52 35 45 52 54 33 33 42 33 54 54 41 47 53 45 53 32 51 28 47 46 32 53 52 45 53 32 34 32 52 53 37 35 46 41 31 44 46 36 47 31 35 53 31 26 28 37 32 34 31 38 46 30 42 51 46 29 40 28 51 51 42 30 31 27 33 30 38 42 51 31 30 42 51 47 42 31 26 42 33 16 24 30 31 45 31 31 30 32 43 25 31 42 48 48 32 31 30 31 31 31 31 31 41 31 30 28 19 24 21 29 32 41 48 31 31 25 27 31 31 32 30 24 28 27 31 18 11 32 30 28 21 37 29 46 32 44 27 24 32 36 27 48 39 22 29 32 27 39 25 21 31 26 41 26 19 46 6 19 33 29 37 31 19 26 36 36 25 29 48 21 28 36 48 29 19 14 22 23 35 24 38 27 32 44 35 17 48 44 24 7 17 32 31 32 28 21 21 33 8 17 35 32 32 26 22 25 19 14 30 27 24 33 25 28 20 23 32 48 48 26 13 19 26 20 39 48 23 31 17 23 21 32 48 33 32 20 22 27 17 26 8 15 25 29 19 9 24 11 18 48 25 5 8 17 18 28 26 28 11 15 19 24 28 14 15 20 18 19 27 19 7 9 7 11 22 27 15 13 23 28 13 18 15 8 16 33 8 21 47 27 12 17 34 5 15 9 13 5 15 4 6 21 8 11 5 6 6 27 17 12 32 10 19 13 7 10 18 25 17 7 11 6 8 22 20 4 7 17 28 13 9 17 6 8 3 6 8 4 17 18 9 14 5 9 8 3 3 5 3 4 5 11 10 9 5 10 7 5 6 7 14 3 3 2 3 14 5 12 9 5 12 21 21 11 5 21 6 11 6 13 7 8

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_143083396_143084516
seq2: B6Ng01-288L12.g_68_1194

seq1  GAATTCTTTGTTATTCTTTTTCCCATAATTTTTATGGAATATATTTTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTATTCTTTTTCCCATAATTTTTATGGAATATATTTTTGG  50

seq1  ATATGACCAGAGAAATATTTTAAAAACTGGAATTCATTAGCTGAATGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACCAGAGAAATATTTTAAAAACTGGAATTCATTAGCTGAATGTAA  100

seq1  GGTAATAGTATTAATGGAAGGTTCTTTAATGAGGCATAGAAAAGGATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATAGTATTAATGGAAGGTTCTTTAATGAGGCATAGAAAAGGATAAC  150

seq1  CTAATGAGAGTTGATAATTTTCACTTGGATGTGGTATGTTGGAGTCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAGAGTTGATAATTTTCACTTGGATGTGGTATGTTGGAGTCATGA  200

seq1  CAAAATTTTATAAAGGCAAAATGGAATATAACGGCCTTGGAGTCAAAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTTATAAAGGCAAAATGGAATATAACGGCCTTGGAGTCAAAGCT  250

seq1  GGGTTGGTTATATTATTGATGTAAGAATCCTAAAGGAACAGATGGCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGTTATATTATTGATGTAAGAATCCTAAAGGAACAGATGGCACTG  300

seq1  TAAAACTCAGCCTTTACTTTTGCTTTTGCCCTTCATGCCAAAAATAAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCAGCCTTTACTTTTGCTTTTGCCCTTCATGCCAAAAATAAGGG  350

seq1  GTAGGAGGAGTGATTCCTGGGCCGTCAAGCTTAGGCTGAGACTGCAGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGGAGTGATTCCTGGGCCGTCAAGCTTAGGCTGAGACTGCAGTAT  400

seq1  TCATTTGCTTAAATATAAGTCAAAGTGGCAGTTCCAGTTTCTCAGCCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGCTTAAATATAAGTCAAAGTGGCAGTTCCAGTTTCTCAGCCATC  450

seq1  AAGTAGTCTTTATGTGATCACACAGTAGTAATCCATTTCTCACACTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTCTTTATGTGATCACACAGTAGTAATCCATTTCTCACACTCTGT  500

seq1  GGAAAAGCAATGTAACGTGAAATCCCCTTCACAATTCATTTTTAGGATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGCAATGTAACGTGAAATCCCCTTCACAATTCATTTTTAGGATGA  550

seq1  CATTGACCACTGAGGTATCAACTCCAAAATTTGTTTTTGTGCAAACTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGACCACTGAGGTATCAACTCCAAAATTTGTTTTTGTGCAAACTAGA  600

seq1  AAAGTTCCCATTTTCTTCAACAGTTTTCATTGCTGAAGTTTAACTTGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCCCATTTTCTTCAACAGTTTTCATTGCTGAAGTTTAACTTGGGG  650

seq1  TTATCATTCTAGATTGGCCTAGCAACTTCATGTAAGCTTTCTGTTAAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATTCTAGATTGGCCTAGCAACTTCATGTAAGCTTTCTGTTAAGTG  700

seq1  AAGGTTATGAAATGGTGGAGAGAAATTTCCTAAAGGATACTGATCTGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTATGAAATGGTGGAGAGAAATTTCCTAAAGGATACTGATCTGAAA  750

seq1  TATAAATTCCTGTAAGTTTCTATTGCAAATGGAAATGTATTACACCAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTCCTGTAAGTTTCTATTGCAAATGGAAATGTATTACACCAGGG  800

seq1  AAGAAAGATAATTGTCTTTTCATCAGGCTCACATCCTTTTATCACTATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGATAATTGTCTTTTCATCAGGCTCACATCCTTTTATCACTATCA  850

seq1  CAATATGAGACATTACAATATTACTAATTTGGCACTTTAAGTGATAGAG-  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CAATATGAGACATTACAATATTACTAATTTGGCACTTTAAGTGATAGAGT  900

seq1  TTAAGCTAATAGAAAGTTTAACACAGTCCCAAAACATGTCAGATATCTAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTAATAGAAAGTTTAACACAGTCCCAAAACATGTCAGATATCTAG  950

seq1  AAGCATGTGTGAAAATTCTTTTGTCACCCACCATTAATTATTCAAAACAC  999
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAGCATGTGTGAAAATTCTTTTGTCACCCACCATTAATTATTC-AAACAC  999

seq1  TCTCAACATCCTAAT-GAGTGATATTCCTTGGAAAATGTTGGCAGGATAA  1048
      ||||||||||||||| |||||||||||||||| ||||| |||||||||||
seq2  TCTCAACATCCTAATGGAGTGATATTCCTTGGGAAATG-TGGCAGGATAA  1048

seq1  CAG-AGAAC--TGTTTGG-ATTTGTTTAATGTG--TTTCTGCTTTATATA  1092
      ||| |||||  ||||||| ||| ||||||||||  ||||||||| |||||
seq2  CAGAAGAACCTTGTTTGGAATTGGTTTAATGTGGTTTTCTGCTTAATATA  1098

seq1  GCACTATTTTCAATTACATATG-CTTAATC  1121
      |||||| ||||| ||||||||| |||||||
seq2  GCACTA-TTTCATTTACATATGCCTTAATC  1127

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information