BAC Information

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BAC

Clone NameB6Ng01-288N10
ChromosomeX (Build37)
Map Location 125,221,245 - 125,221,770
singlet/doubletsinglet
Overlap genenone
Upstream gene4930412D23Rik, LOC385523, LOC100040516, Mdm4-ps, EG237030, LOC100040538
Downstream geneLOC100040550, LOC100040562, LOC100040570, LOC669120
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288N10.bB6Ng01-288N10.g
ACCGA086400GA086401
length1,179965
definitionB6Ng01-288N10.b B6Ng01-288N10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgtttgat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcgtgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
tttccttgccgtctactcctcttgggtgaatttgcttccttttttttcta
gggcttttagatgtgttgtcaagctgctagtatgtgctgtcttcccgttt
cttctttggaggcactcagcgcttatgagtttccctctaaaaatgctttc
attggtgtcccataggtttggtacgtttgtggctcagtttcattaaactc
taaaaaggtctttaatttcttcctttattccctccttgacaaggtatcat
ttgagaaatgagtgtttatttcggtttcccacgtggatgtgttcggtctc
ttcccatcattcatgtggatttattgaat

gaattctttgtttacctctgtaccacattttgaaatatgattatttgatt
ttctggagtccaacatcttgatatatatatgattggtacaggtctttttc
caatctgttgactgctattttgtctcactgagagtgtcttttaccttaca
gaagcttggcatttttaagaggttccatttgttgattcttgatcttacac
acaagcccattgctgttctgttcaggaatttccccctgtgcccaggctct
tccccactttctcctctataagtttccatgtctctggttttatgtggagt
tccttgatccatgtagactagaattttgcacatagagataagaatggatc
aattcgcattcttgtacatggtaactgccagttgagccagcaccatttgt
tgaaatgctgtcttttttccactggatggttttagctcccttgtcaaaga
tcaattgaccataggtgtgtgggttcatttctgggtcttcaattctatta
ccttgatctacctgtctgtctttgtaccagtatcatgcagtttttatcat
aattgctctgtagtacagcttgaggtcaggcatggtgatcccatcagaga
ttcttttatcattgagaatagttttgctatcctaggttttttgttattcc
agatgaatttccaaattgccctttctaattcactgaagaattagaaattc
ttggaattttgatggggattgcattgaatctgtagattttttttcagcaa
gatagtaatttttactatattaatcctgtcaatccataagaaatgggaga
tctttccatcttctgagatcttctttgatttgtttttttttttttttcag
agactttaaggttccttcatacagatctttcaaggtcttaagttagaagt
cacacccaaggttagttatatatttgtgactattgtgaagggtgtggttc
cctatatttctgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_125221245_125221770
seq2: B6Ng01-288N10.g_495_1031 (reverse)

seq1  AGAAAGAAAT-TAGGGAAACAACACCCTTCACAATAGTTACAAATAACAT  49
      ||| |||||| ||||| ||| ||||||||||||||||| |||||| | ||
seq2  AGACAGAAATATAGGG-AACCACACCCTTCACAATAGTCACAAAT-ATAT  48

seq1  AAAATACCTT-GGTGTGACTCTTAAC-TAAGGAAGTGAAAGAACTGTAT-  96
      ||   ||||| |||||||||  |||| ||||    ||||||| |||||| 
seq2  AACTAACCTTGGGTGTGACTTCTAACTTAAGACCTTGAAAGATCTGTATG  98

seq1  AAGAATAACTTCAAGTCTCTGAAGAAGA---------AAATTGAAGAAGA  137
      ||| | | ||| ||||||||||| || |         ||||  |||||||
seq2  AAGGA-ACCTTAAAGTCTCTGAAAAAAAAAAAAAAACAAATCAAAGAAGA  147

seq1  TCTCAGAAGATGGAAAGATCTCCCA-TGCTCATGGATTGGCAGGATTAAT  186
      ||||||||||||||||||||||||| | || |||||||| ||||||||||
seq2  TCTCAGAAGATGGAAAGATCTCCCATTTCTTATGGATTGACAGGATTAAT  197

seq1  ATAGTAAAAATGGCTATC--ACTCAAAAAGCAATCTACAGATTCAATGCA  234
      |||||||||||  |||||   || |||||  |||||||||||||||||||
seq2  ATAGTAAAAATTACTATCTTGCTGAAAAA-AAATCTACAGATTCAATGCA  246

seq1  ATCCCTATCAAAATTCCAA----CTC-AACTCTTCACTGAGTTAGAGAGG  279
      ||||| |||||||||||||     || || |||||| ||| ||||| |||
seq2  ATCCCCATCAAAATTCCAAGAATTTCTAATTCTTCAGTGAATTAGAAAGG  296

seq1  GCAATTTGCAAATGCATCTGGAATAACAAAAAACCTAGGATAACAAAAAC  329
      |||||||| |||| |||||||||||||||||||||||||||| | |||||
seq2  GCAATTTGGAAATTCATCTGGAATAACAAAAAACCTAGGATAGC-AAAAC  345

seq1  TATTCTCAACAATAAAAAGAACCACTGGGGGAAACACCATGCCTGACTTC  379
      |||||||||  || ||||||| | |||  || | ||||||||||||| ||
seq2  TATTCTCAATGAT-AAAAGAATCTCTGATGGGATCACCATGCCTGACCTC  394

seq1  AAGCTGTACTACAGAGCAACTGTGATAAAAACTACATGGTACTGACTGGT  429
      ||||||||||||||||||| | ||||||||||| |||| |    ||||||
seq2  AAGCTGTACTACAGAGCAATTATGATAAAAACTGCATGAT----ACTGGT  440

seq1  ACAGGGACAGACAGGTAGATCAATGGAATAGAATTGAAGACCCAGAAATG  479
      |||  |||||||||||||||||| | ||||||||||||||||||||||||
seq2  ACAAAGACAGACAGGTAGATCAAGGTAATAGAATTGAAGACCCAGAAATG  490

seq1  AACCCACACACCTATGGTTACTTGATCTTTGACAAGGGACCTAAAAC  526
      |||||||||||||||||| | |||||||||||||||||| |||||||
seq2  AACCCACACACCTATGGTCAATTGATCTTTGACAAGGGAGCTAAAAC  537


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