BAC Information

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BAC

Clone NameB6Ng01-290F14
ChromosomeX (Build37)
Map Location 163,361,735 - 163,362,763
singlet/doubletsinglet
Overlap genenone
Upstream geneGemin8, Gpm6b, Ofd1, Trappc2, Rab9, LOC100040795, A630018P17Rik, Egfl6, LOC100041912, LOC641660
Downstream geneLOC667791, EG667794, LOC100040850, LOC627268, Tmsb4x, Tlr8, Tlr7, Prps2, EG627311, Frmpd4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290F14.bB6Ng01-290F14.g
ACCGA087512GA087513
length1,1781,032
definitionB6Ng01-290F14.b B6Ng01-290F14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaattcgaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaacggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggataccgaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtagacactatgcccctccttacaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccatcccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagattatgctggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtagccaaggagctaaagggatctgcaaccgt
ataggtggaacacatatgactacccagtaccccggagctcttgactctag
ctgcaatatgtatcaaagatggtctagtcaggcatcactgaaagaagagc
ccatgactgcaactttaatatgctcagtacaggacgtcaggcaaaggcaa
agtgtttggggattagagggaaagtgtg
gaattctgtttagctctgtaccccatttttaattgggttatttgggttgt
tgctgtctaacttcttgaattctttgtaaattttgtgcagcttggtcttc
atgtgggtcctgagtaactggaacagggctatccaaaaaatggttgcctg
tatgtgggatatgctcttctagctggtgtgcctcagtgggagaggaagtg
cttagcttggcagagacttgaagtacaggggtaaggggaaccctgggggc
ctctacctgctcagaggagaaggggaggaggatcagaggaaagactgtgg
gagaggttgacatggggggcagtgagctgattgtagagtgaataggtaaa
aaataataaaatttcataaatcatataagcaatctaaaaccaatgaaaga
atgttctactattaatttgtccccatcatttttgctaaagatctgtaagt
tccttcatgtcactaataaactaatggtccttttgcttaaaaaacaagca
aacaaaaataccttaaatgatttaattttgcatactgtttataaatatat
gaagtgtgctatagaaaatgataaatgacttataaatattttttgtaatt
tgtaattgagacacaaatgtcatcatattaggaaagattggttagagttt
tcataatcagtttgcttgtttgtctgtctgtttatttgagatatattctt
tctatgtagctcatacaggcttcaatttcactgtaaccctacagtggctg
gcatgaagtaccactaccaactatacaaagataagtaaatttatcttagg
ctggaacttggccaatttttcaggaaagatgcagaaattaagtattttag
gctttgaggtatgagctacagaaaagaaaatggcacagtctcttatgaaa
ctattttaaaatgtgaaaaaagttagaggcagagattggggttcccagga
tctttagaaatggaatggtattattttggattataacaaatcagttattt
tttacagacattctgcttgcaactgttgatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_163361735_163362763
seq2: B6Ng01-290F14.g_67_1098 (reverse)

seq1  ATATCAACAGTTTCCAGCAGATGTTCTGT-AAAAATAACTGATTTGTTTA  49
      |||||||||||| | ||||||   ||||| ||||||||||||||||||  
seq2  ATATCAACAGTTGCAAGCAGAATGTCTGTAAAAAATAACTGATTTGTTAT  50

seq1  TATCCAAA--TATACCATTCCATTTCTTAAGATCTTGGG-ACCCCAATCT  96
       |||||||   |||||||||||||||| |||||| |||| ||||||||||
seq2  AATCCAAAATAATACCATTCCATTTCTAAAGATCCTGGGAACCCCAATCT  100

seq1  CTGCCTCTTAACTTTTTCACATTTTAAAATAGTTTTCATAAGAGACTGTG  146
      |||||||| |  |||||||||||||||||||| |||||||||||||||||
seq2  CTGCCTCTAACTTTTTTCACATTTTAAAATAG-TTTCATAAGAGACTGTG  149

seq1  CCATTTTCTTTTCTGTAGCTCATACCTCAAAGCCTAAAATACTTAATTTC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTCTTTTCTGTAGCTCATACCTCAAAGCCTAAAATACTTAATTTC  199

seq1  TGCATCTTTCCTGAAAAATTGGCCAAGTTCCAGCCTAAGATAAATTTACT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTTTCCTGAAAAATTGGCCAAGTTCCAGCCTAAGATAAATTTACT  249

seq1  TATCTTTGTATAGTTGGTAGTGGTACTTCATGCCAGCCACTGTAGGGTTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTGTATAGTTGGTAGTGGTACTTCATGCCAGCCACTGTAGGGTTA  299

seq1  CAGTGAAATTGAAGCCTGTATGAGCTACATAGAAAGAATATATCTCAAAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAAATTGAAGCCTGTATGAGCTACATAGAAAGAATATATCTCAAAT  349

seq1  AAACAGACAGACAAACAAGCAAACTGATTATGAAAACTCTAACCAATCTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGACAGACAAACAAGCAAACTGATTATGAAAACTCTAACCAATCTT  399

seq1  TCCTAATATGATGACATTTGTGTCTCAATTACAAATTACAAAAAATATTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATATGATGACATTTGTGTCTCAATTACAAATTACAAAAAATATTT  449

seq1  ATAAGTCATTTATCATTTTCTATAGCACACTTCATATATTTATAAACAGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTCATTTATCATTTTCTATAGCACACTTCATATATTTATAAACAGT  499

seq1  ATGCAAAATTAAATCATTTAAGGTATTTTTGTTTGCTTGTTTTTTAAGCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAATTAAATCATTTAAGGTATTTTTGTTTGCTTGTTTTTTAAGCA  549

seq1  AAAGGACCATTAGTTTATTAGTGACATGAAGGAACTTACAGATCTTTAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACCATTAGTTTATTAGTGACATGAAGGAACTTACAGATCTTTAGC  599

seq1  AAAAATGATGGGGACAAATTAATAGTAGAACATTCTTTCATTGGTTTTAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGATGGGGACAAATTAATAGTAGAACATTCTTTCATTGGTTTTAG  649

seq1  ATTGCTTATATGATTTATGAAATTTTATTATTTTTTACCTATTCACTCTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTATATGATTTATGAAATTTTATTATTTTTTACCTATTCACTCTA  699

seq1  CAATCAGCTCACTGCCCCCCATGTCAACCTCTCCCACAGTCTTTCCTCTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGCTCACTGCCCCCCATGTCAACCTCTCCCACAGTCTTTCCTCTG  749

seq1  ATCCTCCTCCCCTTCTCCTCTGAGCAGGTAGAGGCCCCCAGGGTTCCCCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCTCCCCTTCTCCTCTGAGCAGGTAGAGGCCCCCAGGGTTCCCCT  799

seq1  TACCCCTGTACTTCAAGTCTCTGCCAAGCTAAGCACTTCCTCTCCCACTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCTGTACTTCAAGTCTCTGCCAAGCTAAGCACTTCCTCTCCCACTG  849

seq1  AGGCACACCAGCTAGAAGAGCATATCCCACATACAGGCAACCATTTTTTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACACCAGCTAGAAGAGCATATCCCACATACAGGCAACCATTTTTTG  899

seq1  GATAGCCCTGTTCCAGTTACTCAGGACCCACATGAAGACCAAGCTGCACA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCCCTGTTCCAGTTACTCAGGACCCACATGAAGACCAAGCTGCACA  949

seq1  AAATTTACAAAGAATTCAAGAAGTTAGACAGCAACAACCCAAATAACCCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTACAAAGAATTCAAGAAGTTAGACAGCAACAACCCAAATAACCCA  999

seq1  ATTAAAAATGGGGTACAGAGCTAAACAGAATTC  1029
      |||||||||||||||||||||||||||||||||
seq2  ATTAAAAATGGGGTACAGAGCTAAACAGAATTC  1032