BAC Information

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BAC

Clone NameB6Ng01-291K17
ChromosomeX (Build37)X (Build37)
Map Location 148,033,473 - 148,034,261143,922,799 - 143,923,784
singlet/doubletsingletsinglet
Overlap genePhf8
Upstream genePfkfb1, Tro, LOC100039716, Maged2, Itih5l, LOC667021, Gnl3l, Fgd1, Tsr2, LOC100040221, EG667027, Wnk3, LOC675278, ORF34, LOC623804, LOC100039760
Downstream geneLOC385448, LOC237116, Huwe1, LOC675514, Hsd17b10, Ribc1, Smc1a, LOC100040394, Iqsec2, Jarid1c, 2900056M20Rik, Tspyl2, Gpr173, LOC207318, EG667113, EG635412, LOC635396, EG667130
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291K17.bB6Ng01-291K17.g
ACCGA088497GA088498
length1,149984
definitionB6Ng01-291K17.b B6Ng01-291K17.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(148,033,473 - 148,034,261)(143,922,799 - 143,923,784)
sequence
gaattcccctgtactggggcgtatgatattcggaggaccaaaggcctctc
ctcccattgatggccgactaggccatcctttgctacatatgcagatagag
acactgggggtactggttagttcatattgttgttcctcctataggattgc
agaccccctcagctccttgggtactttctctagctcctcctttgggggcc
ctgtgtaccatccaatatatgactgtgaacatccacttctgtatttgcca
ggcactggcctaacctcccaagagacagatatatcaaggtcctgtcagct
aaatcttgctggcatatgcaagagtgtgtgggtttggtggatggttatgg
gatggatggcagtaacaggatatgtagacttgaggaagaagcaattttaa
gtactttggaaatgggccagggagagtcatagaaagagaattgttaataa
aaggaaataatgcagcatagatggtgaaaagaggattctgtctctccaca
ttgcttgtctttagagagacctgaggcaaaattcgcttttcataaaaaca
gattttagtattatcttcattcttaaccatgaatggttctttcctttgta
ataccttgattgacatagctattctttctgagtgttctgacatttggttt
cttctggctacaataacttccccagtgtttctcctttgtcctttgcagtg
aggccccagcctcccccagcactcaagaggccatccagggcatgttgtgt
atggccaacctgcagtcctcatcatcctcaccagctacctccagtctgca
ggctttggtggactggagggcaagaaagaagcagcgggagctccagcagt
ggcctgggcactgtgtctagtagtcctgcttcccagcgcaccccagggaa
gcggcccatcaagaggccagcatactggaaaaacgagagtgaagaggagg
agaatgccagtcttgatgagcagacagcttgcgagcatgcttcaaggatg
ctgagtaatagtaggaacatgttaggaatattaaggctagatcaagagtt
ccctttagcccaaattccaatcctaacttctaaagaagaaaaatagctat
aggtgaacacagtctcaaccctagcttagatacttattttttttccctg
gaattcttccttgttgatttgtactgaaaaacaattaaaatgcatggttt
attttttccttgaaatgtgaaagttttgttcataatggcacataatgctt
attgctacattggtacttttattaacttacctgcaatgaaacttatggac
accgtgggcttaaacagtcttcctattcacacatacaatgccatgagtga
cactgctccaagacctcaaaatatgccaagtaacatttccttcctaatca
agatccatttcccattccgtcccgtttgcaatctcaaggctatcttaaaa
aaacagctgtcaaactgtgggtcgtgaagggcttggagatcacgtataag
ataccctgcatatcaggtatttacataataattgataaaagcatcaaaat
tacagttatgaactagcaacaaaataattgtatgcttggggttaccatag
catgaggaactgtattaaagtgtcatggcattaggaaggttgtaaagtct
tgcttcttctaagttcactctgttcaacaagtcaattatgttggctaact
tctgaattcttaaaactaccatcctatcccgggttctaagaatctcccac
ctgatgtgtaatttcactatactaaaacatgagcaattgttgaagaagct
gagctagatatgtggttcctacgatctctgatactctgggttcaagcctc
agcacaacaaaagaagtaatctactgatttcaggcttgaagaaactgcat
catatgcatatacagacttcccaatgatagaaatagtgcctcaatccaac
atttagaactattgcttattatacatcatttatgactgctatatatgtat
tgaatagtttcatctgcattacaactgcatgatgtatatgtactattatt
cccccactttactgtgacagctacagatagattgtccactgtaaatgatc
aatgtgaactagtgatgcttaaatctaaaatcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_148033473_148034261
seq2: B6Ng01-291K17.b_395_1189

seq1  GATGGCAGTAACAGGATATGTAGACTTGAGGAAGAAGCAATTTTAAGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCAGTAACAGGATATGTAGACTTGAGGAAGAAGCAATTTTAAGTAC  50

seq1  TTTGGAAATGGGCCAGGGAGAGTCATAGAAAGAGAATTGTTAATAAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAATGGGCCAGGGAGAGTCATAGAAAGAGAATTGTTAATAAAAGG  100

seq1  AAATAATGCAGCATAGATGGTGAAAAGAGGATTCTGTCTCTCCACATTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGCAGCATAGATGGTGAAAAGAGGATTCTGTCTCTCCACATTGC  150

seq1  TTGTCTTTAGAGAGACCTGAGGCAAAATTCGCTTTTCATAAAAACAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTAGAGAGACCTGAGGCAAAATTCGCTTTTCATAAAAACAGATT  200

seq1  TTAGTATTATCTTCATTCTTAACCATGAATGGTTCTTTCCTTTGTAATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATTATCTTCATTCTTAACCATGAATGGTTCTTTCCTTTGTAATAC  250

seq1  CTTGATTGACATAGCTATTCTTTCTGAGTGTTCTGACATTTGGTTTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTGACATAGCTATTCTTTCTGAGTGTTCTGACATTTGGTTTCTTC  300

seq1  TGGCTACAATAACTTCCCCAGTGTTTCTCCTTTGTCCTTTGCAGTGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTACAATAACTTCCCCAGTGTTTCTCCTTTGTCCTTTGCAGTGAGGC  350

seq1  CCCAGCCTCCCCCAGCACTCAAGAGGCCATCCAGGGCATGTTGTGTATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCTCCCCCAGCACTCAAGAGGCCATCCAGGGCATGTTGTGTATGG  400

seq1  CCAACCTGCAGTCCTCATCATCCTCACCAGCTACCTCCAGTCTGCAGGC-  449
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCAACCTGCAGTCCTCATCATCCTCACCAGCTACCTCCAGTCTGCAGGCT  450

seq1  TTGGTGGACTGGAGGGCAAGAAAGAAGCAGCGGGAGCTCCAGCAGTGGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGACTGGAGGGCAAGAAAGAAGCAGCGGGAGCTCCAGCAGTGGCC  500

seq1  TGGGCACTGTGTCTAGTAGTCCTGCTTCCCAGCGCACCCCAGGGAAGCGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACTGTGTCTAGTAGTCCTGCTTCCCAGCGCACCCCAGGGAAGCGG  550

seq1  CCCATCAAGAGGCCAGCATACTGGAAAAACGAGAGTGAAGAGGAGGAGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCAAGAGGCCAGCATACTGGAAAAACGAGAGTGAAGAGGAGGAGAA  600

seq1  TGCCAGTCTTGATGAGCAAGACAGCTTGGGAGCATGCTTCAAGGATGCTG  649
      ||||||||||||||||| |||||||||| |||||||||||||||||||||
seq2  TGCCAGTCTTGATGAGC-AGACAGCTTGCGAGCATGCTTCAAGGATGCTG  649

seq1  AGT-ATAGTAAGAACATGTTA-GAATATT-AGGCTAGATCAAAGAGTTCC  696
      ||| |||||| |||||||||| ||||||| |||||||||| |||||||||
seq2  AGTAATAGTAGGAACATGTTAGGAATATTAAGGCTAGATC-AAGAGTTCC  698

seq1  CTTTAGCCC-AATTTCAATCCTAAC-TCT-AAGA--GAAAATAGCCTATA  741
      ||||||||| |||| |||||||||| ||| ||||   ||||||| |||||
seq2  CTTTAGCCCAAATTCCAATCCTAACTTCTAAAGAAGAAAAATAG-CTATA  747

seq1  -GTGAACACAGGTCTCAACCTTAAGCTAGATACTTATTTTTTTTCCCTG  789
       ||||||||| ||||||||| ||   |||||||||||||||||||||||
seq2  GGTGAACACA-GTCTCAACCCTAGCTTAGATACTTATTTTTTTTCCCTG  795

seq1: chrX_143922799_143923784
seq2: B6Ng01-291K17.g_65_1048

seq1  GAATTCTTCCTTGTTGATTTGTACTGAAAAACAATTCAAATGCATGGTTT  50
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAATTCTTCCTTGTTGATTTGTACTGAAAAACAATTAAAATGCATGGTTT  50

seq1  ATTTTTTCCTTGAACATGTGAAAGTTTTGTTCATAATGGCACATAAGGCT  100
      |||||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  ATTTTTTCCTTGAA-ATGTGAAAGTTTTGTTCATAATGGCACATAATGCT  99

seq1  TATTGCTACATTGGTACTTTTATTAACTTACCTGCAATGAAACTTATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTACATTGGTACTTTTATTAACTTACCTGCAATGAAACTTATGGA  149

seq1  CACAGTCAGTTTAAACAGTCTTCCTATTCACACATACAATGCCATGAGTG  200
      ||| ||  | ||||||||||||||||||||||||||||||||||||||||
seq2  CACCGTGGGCTTAAACAGTCTTCCTATTCACACATACAATGCCATGAGTG  199

seq1  ACACTGCTCCAAGACCTCAAAATATGCCAAGTAACATTTCCTTCCTAAGC  250
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACACTGCTCCAAGACCTCAAAATATGCCAAGTAACATTTCCTTCCTAATC  249

seq1  AAGATCCATTTCCCATTCCTTCAGGTTTGCAATCTCAGGGCTATCTTAGA  300
      ||||||||||||||||||| ||  ||||||||||||| |||||||||| |
seq2  AAGATCCATTTCCCATTCCGTCCCGTTTGCAATCTCAAGGCTATCTTAAA  299

seq1  AAAACAGCTGTCAAACTGTGGGTCGTGAAGGGCTTGGAGATCACGTATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCTGTCAAACTGTGGGTCGTGAAGGGCTTGGAGATCACGTATAA  349

seq1  GATACCCTGCATATCAGGTATTTACATAATAATTGATAAAAGCAGCAAAA  400
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GATACCCTGCATATCAGGTATTTACATAATAATTGATAAAAGCATCAAAA  399

seq1  TTACAGTTATGAAGTAGCAACAAAATAATTGTATGCTTGGGGTTACCATA  450
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTATGAACTAGCAACAAAATAATTGTATGCTTGGGGTTACCATA  449

seq1  GCATGAGGAACTGTATTAAAGTGTCATGGCATTAGGAAGGTTGTAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGGAACTGTATTAAAGTGTCATGGCATTAGGAAGGTTGTAAAGTC  499

seq1  TTGCTTCTTCTAAGTTCACTCTGTTCAACAAGTCAATTATGTTGGCTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCTTCTAAGTTCACTCTGTTCAACAAGTCAATTATGTTGGCTAAC  549

seq1  TTCTGAATTCTTAAAACTACCATCCTATCCAGGGTTCTTAGAATCTCCCA  600
      |||||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  TTCTGAATTCTTAAAACTACCATCCTATCCCGGGTTCTAAGAATCTCCCA  599

seq1  CCTGGTTTGTAATTTCACTATACTAAAACATGAGCAATTGTTTTAAGAAG  650
      |||| | ||||||||||||||||||||||||||||||||| || ||||||
seq2  CCTGATGTGTAATTTCACTATACTAAAACATGAGCAATTG-TTGAAGAAG  648

seq1  CTGAGCTAGAGATGTGGTTCCTACTATCTCTGAAACTCTGGGTTCAATCC  700
      |||||||||| ||||||||||||| |||||||| ||||||||||||| ||
seq2  CTGAGCTAGATATGTGGTTCCTACGATCTCTGATACTCTGGGTTCAAGCC  698

seq1  TCAGCACAACAAAAGAAGTAATCTACTGATTTCAGGCTTAAAGAAACTGC  750
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCAGCACAACAAAAGAAGTAATCTACTGATTTCAGGCTTGAAGAAACTGC  748

seq1  ATTAAATGCATATACCGACTTCCCAATGATAGTAATAGTGCTAAAATCTA  800
      || | |||||||||| |||||||||||||||| ||||||||   |||| |
seq2  ATCATATGCATATACAGACTTCCCAATGATAGAAATAGTGCCTCAATCCA  798

seq1  ACATTTAGAACTATTGCTTATTATACATCAGTAATGACTGCATTATATGT  850
      |||||||||||||||||||||||||||||| | ||||||||  |||||||
seq2  ACATTTAGAACTATTGCTTATTATACATCATTTATGACTGCTATATATGT  848

seq1  ATTGAAAAGTTTCATCTTTATAACAACTGCATAAGGTATATGTACTATTA  900
      |||||| ||||||||||  || |||||||||| | |||||||||||||||
seq2  ATTGAATAGTTTCATCTGCATTACAACTGCATGATGTATATGTACTATTA  898

seq1  -TCCCCCAATTTATTGTGAAACATAGAGATAGATTGTTCAATGTAAATTA  949
       ||||||| |||| ||||| |  || ||||||||||| || ||||||| |
seq2  TTCCCCCACTTTACTGTGACAGCTACAGATAGATTGTCCACTGTAAATGA  948

seq1  TCTATGTGACAAAGTGATGCTTAGAATCAAAAATCAC  986
      || ||||||   ||||||||||| |||| ||||||||
seq2  TCAATGTGAACTAGTGATGCTTA-AATCTAAAATCAC  984