MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-291P10
Chromosome	X (Build37)
Map Location	144,633,298 - 144,747,199
singlet/doublet	doublet
Overlap gene	LOC434864, EG624096
Upstream gene	Il13ra2, V1rb10, Lrch2, LOC100039462, LOC666789, LOC434863, EG623995, EG624023, LOC666184, LOC100039511, LOC666812, LOC100039519
Downstream gene	LOC100039545, LOC666837, LOC100039553, LOC100034729, LOC666861, EG666864, LOC434866, EG666868, EG624260, LOC434865, EG624310, Ott, LOC666888, LOC100039598, LOC100039890
Link	Open Mouse BAC browser

Click to get alignment info.

name	Il13ra2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16165 MGI:1277954
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	V1rb10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:113867 MGI:2148521
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrch2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210297 MGI:2147870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039462 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039462
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	LOC666789 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC434863 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434863
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 17 ESTs, 9 Proteins

name	EG623995 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623995 MGI:3642951
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG624023 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624023 MGI:3644694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC666184 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 15 ESTs, 4 Proteins

name	LOC100039511 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039511
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	LOC666812 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC100039519 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC434864 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG624096 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624096 MGI:3643280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100039545 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039545
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 15 ESTs, 2 Proteins pseudo : _no_value

name	LOC666837 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666837
definition	note : lysyl-tRNA synthetase pseudogene pseudo : _no_value

name	LOC100039553 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039553
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100034729 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100034729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666861 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666861
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG666864 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666864 MGI:3648921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC434866 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 17 ESTs, 8 Proteins

name	EG666868 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666868 MGI:3644011
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG624260 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624260 MGI:3646683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC434865 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 16 ESTs, 4 Proteins

name	EG624310 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624310 MGI:3644796
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Ott (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18422 MGI:107573
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666888 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666888
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC100039598 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039598
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039890 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 15 ESTs, 9 Proteins

name	Il13ra2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345552 GeneID:16165 MGI:1277954
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 13 receptor, alpha 2 transcript_id : NM_008356.2

name	V1rb10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118200340 GeneID:113867 MGI:2148521
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, B10 transcript_id : NM_053240.2

name	Lrch2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487174 GeneID:210297 MGI:2147870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine-rich repeats and calponin homology (CH) domain containing 2 transcript_id : NM_001081173.1

name	LOC434863 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94408343 GeneID:434863
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 17 ESTs, 5 Proteins product : ovary testis transcribed-like, transcript variant 1 transcript_id : XM_486785.3

name	LOC434863 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272432 GeneID:434863
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 1 Protein product : ovary testis transcribed-like, transcript variant 3 transcript_id : XM_897719.3

name	LOC434863 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272434 GeneID:434863
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 5 Proteins product : ovary testis transcribed-like transcript_id : XM_001473108.1

name	EG624023 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272425 GeneID:624023 MGI:3644694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG624023 transcript_id : XM_888549.3

name	LOC666184 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94408346 GeneID:666184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 15 ESTs, 2 Proteins product : ovary testis transcribed-like, transcript variant 4 transcript_id : XM_982169.1

name	LOC666184 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94408350 GeneID:666184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 15 ESTs, 2 Proteins product : ovary testis transcribed-like, transcript variant 2 transcript_id : XM_982089.1

name	LOC434864 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:126032330 GeneID:434864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ovary testis transcribed-like transcript_id : NM_001081648.1

name	LOC100034729 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:131887312 GeneID:100034729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ovary testis transcribed-like transcript_id : NM_001082966.1

name	LOC434866 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272441 GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 16 ESTs, 2 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 1 transcript_id : XM_001487784.1

name	LOC434866 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272443 GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 1 Protein product : novel protein similar to ovary testis transcribed (Ott), transcript variant 3 transcript_id : XM_001487786.1

name	LOC434866 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272445 GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 16 ESTs, 2 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 4 transcript_id : XM_001487787.1

name	LOC434866 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272447 GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 4 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 2 transcript_id : XM_001487785.1

name	LOC434866 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272451 GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 4 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 5 transcript_id : XM_001487788.1

name	LOC434866 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272449 GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 1 Protein product : novel protein similar to ovary testis transcribed (Ott), transcript variant 6 transcript_id : XM_001487789.1

name	LOC434865 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94408362 GeneID:434865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 16 ESTs, 2 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 1 transcript_id : XM_486789.4

name	LOC434865 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94408364 GeneID:434865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 16 ESTs, 2 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 4 transcript_id : XM_897890.2

name	EG624310 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272430 GeneID:624310 MGI:3644796
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG624310 transcript_id : XM_888852.2

name	Ott (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859585 GeneID:18422 MGI:107573
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ovary testis transcribed transcript_id : NM_011022.1

name	LOC100039890 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272457 GeneID:100039890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 15 ESTs, 5 Proteins product : similar to ovary testis transcribed, transcript variant 1 transcript_id : XM_001473712.1

name	LOC100039890 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272459 GeneID:100039890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 4 Proteins product : similar to ovary testis transcribed, transcript variant 2 transcript_id : XM_001473728.1

name	LOC100039890 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272461 GeneID:100039890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 15 ESTs, 1 Protein product : similar to ovary testis transcribed, transcript variant 3 transcript_id : XM_001473747.1

name	Il13ra2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680405 CCDS:CCDS30460.1 GeneID:16165 MGI:1277954
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0004907 - interleukin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA] codon_start : 1 product : interleukin 13 receptor, alpha 2 protein_id : NP_032382.1

name	V1rb10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118200341 GeneID:113867 MGI:2148521
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0016503 - pheromone receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] [Evidence ISS]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence IEA]; GO:0007606 - sensory perception of chemical stimulus [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : vomeronasal 1 receptor, B10 protein_id : NP_444470.2

name	Lrch2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487175 GeneID:210297 MGI:2147870
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine-rich repeats and calponin homology (CH) domain containing 2 protein_id : NP_001074642.1

name	LOC434863 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:51772467 GeneID:434863
definition	codon_start : 1 product : hypothetical protein LOC434863 isoform 1 protein_id : XP_486785.1

name	LOC434863 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272433 GeneID:434863
definition	codon_start : 1 product : hypothetical protein LOC434863 isoform 3 protein_id : XP_902812.3

name	LOC434863 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272435 GeneID:434863
definition	codon_start : 1 product : hypothetical protein LOC434863 protein_id : XP_001473158.1

name	EG624023 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272426 GeneID:624023 MGI:3644694
definition	codon_start : 1 product : similar to AU022751 protein protein_id : XP_893642.3

name	LOC666184 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94408347 GeneID:666184
definition	codon_start : 1 product : hypothetical protein LOC666184 isoform 4 protein_id : XP_987263.1

name	LOC666184 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94408351 GeneID:666184
definition	codon_start : 1 product : hypothetical protein LOC666184 isoform 2 protein_id : XP_987183.1

name	LOC434864 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:126032331 GeneID:434864
definition	codon_start : 1 product : hypothetical protein LOC434864 protein_id : NP_001075117.1

name	LOC100034729 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:131887313 GeneID:100034729
definition	codon_start : 1 product : hypothetical protein LOC100034729 protein_id : NP_001076435.1

name	LOC434866 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272442 GeneID:434866
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001487834.1

name	LOC434866 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272446 GeneID:434866
definition	codon_start : 1 product : hypothetical protein isoform 4 protein_id : XP_001487837.1

name	LOC434866 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272444 GeneID:434866
definition	codon_start : 1 product : hypothetical protein isoform 3 protein_id : XP_001487836.1

name	LOC434866 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272448 GeneID:434866
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001487835.1

name	LOC434866 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272452 GeneID:434866
definition	codon_start : 1 product : hypothetical protein isoform 5 protein_id : XP_001487838.1

name	LOC434866 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272450 GeneID:434866
definition	codon_start : 1 product : hypothetical protein isoform 6 protein_id : XP_001487839.1

name	LOC434865 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:51772471 GeneID:434865
definition	codon_start : 1 product : hypothetical protein LOC434865 isoform 1 protein_id : XP_486789.1

name	LOC434865 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94408365 GeneID:434865
definition	codon_start : 1 product : hypothetical protein LOC434865 isoform 4 protein_id : XP_902983.2

name	EG624310 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272431 GeneID:624310 MGI:3644796
definition	codon_start : 1 product : similar to AU022751 protein protein_id : XP_893945.2

name	Ott (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859586 GeneID:18422 MGI:107573
definition	codon_start : 1 product : ovary testis transcribed protein_id : NP_035152.1

name	LOC100039890 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272458 GeneID:100039890
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001473762.1

name	LOC100039890 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272462 GeneID:100039890
definition	codon_start : 1 product : hypothetical protein isoform 3 protein_id : XP_001473797.1

name	LOC100039890 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272460 GeneID:100039890
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001473778.1

name	LOC100039462 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039462
definition	number : 1 pseudo : _no_value

name	LOC100039462 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039462
definition	number : 2 pseudo : _no_value

name	LOC100039462 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039462
definition	number : 3 pseudo : _no_value

name	LOC100039462 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039462
definition	number : 4 pseudo : _no_value

name	LOC100039462 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039462
definition	number : 5 pseudo : _no_value

name	LOC100039462 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039462
definition	number : 6 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 1 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 2 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 3 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 4 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 5 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 6 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 7 pseudo : _no_value

name	EG623995 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623995
definition	number : 2 pseudo : _no_value

name	EG623995 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623995
definition	number : 1 pseudo : _no_value

name	LOC100039511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039511
definition	number : 1 pseudo : _no_value

name	LOC100039511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039511
definition	number : 2 pseudo : _no_value

name	LOC100039511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039511
definition	number : 3 pseudo : _no_value

name	LOC100039511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039511
definition	number : 4 pseudo : _no_value

name	LOC666812 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666812
definition	number : 1 pseudo : _no_value

name	LOC100039519 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039519
definition	number : 2 pseudo : _no_value

name	LOC100039519 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039519
definition	number : 1 pseudo : _no_value

name	EG624096 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624096
definition	number : 2 pseudo : _no_value

name	EG624096 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624096
definition	number : 1 pseudo : _no_value

name	LOC100039553 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039553
definition	number : 2 pseudo : _no_value

name	LOC100039553 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039553
definition	number : 1 pseudo : _no_value

name	LOC666861 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666861
definition	number : 1 pseudo : _no_value

name	EG666864 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666864
definition	number : 2 pseudo : _no_value

name	EG666864 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666864
definition	number : 1 pseudo : _no_value

name	EG666868 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666868
definition	number : 1 pseudo : _no_value

name	EG624260 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624260
definition	number : 2 pseudo : _no_value

name	EG624260 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624260
definition	number : 1 pseudo : _no_value

name	LOC666888 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666888
definition	number : 1 pseudo : _no_value

name	LOC100039598 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039598
definition	number : 2 pseudo : _no_value

name	LOC100039598 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039598
definition	number : 1 pseudo : _no_value

name	LOC100039545 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272427 GeneID:100039545
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 15 ESTs, 2 Proteins product : similar to Ott protein pseudo : _no_value transcript_id : XR_031018.1

clone name	MSMg01-366B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080M22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-209C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175M06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-090H04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-081E04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-328P16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-350H24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-356A02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-361E24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-416F21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-346B20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-506I17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-527N13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-509F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342C04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-291P10.b	B6Ng01-291P10.g
ACC	GA088720	GA088721
length	1,211	1,161
definition	B6Ng01-291P10.b	B6Ng01-291P10.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(144,633,298 - 144,634,502)	(144,746,035 - 144,747,199)
sequence	gaattcactgctgaaaatatggaaaataatttttctcaaaataatacaca ggacacagacgtgacagtaggggaagaaatggccattttttcagacaaag attttcagcaaatcatcctctacttcatctggtaagtgaacactaagggt taacagaaatcaagagtctgagatgtaacatagttcttttagagatgagt gtgtttgtttctttgaagacaaggtcttacaagttccatagtacaaggta gtatatcactttctatgtagcctaggttggtaaagaatttctgatgttcg tcctgtctcagtcttccagtgatgaaactaaaagaaggtgttatatgtta ggtatcataattacttttctttgtaaaaaaacactatgatcaaggcagtg tacaaaaggaagagggtcagaaaccttgatcatcatggggtgggcagtgt attgcagcaggaggaaggccccttcaactatttcaggaaacattttattt tttattttaatcattgggaattttgaatttataaggtacaaaaatagata gtttgtgattgtcattaattgtaaatattattctcattttgtcctcatat aaatttttatcttaagctatagtgtaaaaatagtttactaccctcaaaaa ctaatggtatgaaccagaaatctggagtagagagataccctagtatttaa aagtgcttgctagtgttccagatgacccaagttcagctctcaacacccac atcagtggtcctataacttaaatgcagtttcaagggctttaacccctcct ctggtttctgtaagcaccacacacatggggcataatctcacataaaacac acacataaacacacacacacacacacacacacacacacacacacacacac acaaacctatacacataaaaaatcacgtgaagatagaaattaagtgaaat gggatatgaaaccacattctggaacctttccagaggaaaaatttatactt ccctgtacttctaaactggccataggtaactggtccatggggacacaaga aatttgatatatgtatccagtagctccagcctaacagtagacctagtaat ccttagcctgttataatagccatcctggtgtaaaacgtgtggacccggaa aatgtcctgccagtaggacacttgccaagataaattggcctggaaacccc acacaaaaagc	gaattcaggctcagtgaatactggattttaggacaggcttttgaccaaag tatttttttcaagacaggttgccccttcactctgtagcttcatataaaaa attaagaggtaaataaacgaagcaatgaacacacaaacacataaacaaac gcagcataatttcaaatgaaaggtcagaaaatggtaatagggtaagtgtt ctttgctcccaaactctcaatgtaccaatgaaagatgcataaattacgtg aaatgtgtaacctgaaagtgagaatgcttttccccccaacagctggcccc tggattttctgtgtacccagcttgatgtcttgttggctggattagaaatc aaaatgggaataattttcctggctttgttttctctgtcaaaagaactgga gacatataacagctgttaaactctttccttaaatgccttaggacctgaat tagatgcccagattccctgcagaaaccaccaactcaaggaccagtgaaat ggctcagtgagtcactgtagttgctcccttactgggcaacctatgttgga tccctgggaatggcattttgaaaataatgaagcaactccttcaccttttg ggctaatccacacatatatgcaccatagcatgccacatgacatctgaatc aatcacaaagacacaatatatggaaataatatgcggagcatcatgattta taacagtattcactcatgtgggaaggcagagctcagagaatccctgggat attgtagtggacacctaccctggcctgactgctaagccccaggtccctat tagagattgatctcagcaaacatgaggaggattcctgatgaacaagtgtc agtggtaacagtaagcgtccacatggaagtagacaaacctaacagcacta ctacacacacatgtgctcctgttcacatactaacagagcaccacagagat gtagtcatactttcacatcatacaccacaccacagagatactggcagaag aagaaaaggaaaattaggttatgtgcacagtggagcattgttaatattcc tcaacccttgctcaggatcatttagacctcaatgttgctctgtttctcca gaagggccagtcaaatgtaacggtagcactgaattccctgtgctcaggaa tgaactacaat
quality values	Open. Hide. 47 31 34 39 58 41 19 62 62 62 62 62 62 47 62 62 56 51 62 41 62 43 62 62 62 62 56 62 62 62 62 41 34 34 32 27 21 19 18 25 25 34 43 49 62 62 62 59 59 59 62 62 59 62 62 62 62 62 59 62 62 62 59 54 62 59 62 62 62 62 54 49 54 59 62 62 62 59 59 59 49 42 34 42 54 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 54 59 62 54 49 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 56 54 54 62 62 62 56 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 43 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 51 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 54 58 58 54 58 54 58 58 58 58 58 58 58 58 58 54 58 58 54 54 58 58 58 54 58 58 58 48 58 54 58 58 58 58 58 58 58 58 58 54 58 48 58 58 52 54 58 45 58 42 52 54 58 54 58 54 54 54 54 44 58 58 58 54 45 33 58 58 58 58 50 47 47 58 54 58 46 46 53 51 58 54 49 49 50 50 33 58 39 42 50 51 58 58 58 58 23 52 53 46 49 35 58 40 43 47 33 35 58 58 53 50 34 35 52 45 58 49 41 58 58 58 52 50 53 39 58 42 51 46 52 53 51 42 54 46 53 49 41 32 39 49 32 52 53 36 58 58 32 54 51 49 42 41 28 18 39 51 50 41 49 32 29 41 37 47 58 39 33 50 32 52 50 40 45 30 51 54 34 49 51 45 41 34 46 32 37 17 28 40 54 41 42 50 37 25 29 49 54 37 52 29 23 51 54 39 37 33 54 22 20 37 40 54 54 46 28 34 53 34 53 31 47 37 32 51 30 45 29 53 29 46 37 32 45 29 37 37 31 45 32 52 32 42 24 11 14 49 46 40 32 27 37 34 29 36 52 32 32 24 53 23 53 14 51 46 32 42 19 46 18 46 23 45 8 40 20 32 27 23 20 20 16 22 15 25 18 21 15 31 22 30 14 25 17 21 21 22 22 21 11 19 16 34 28 32 29 31 32 31 27 31 25 31 28 27 21 30 18 28 25 28 29 32 31 42 43 31 18 30 25 31 16 29 13 29 6 46 44 46 46 16 25 25 13 13 20 24 17 24 18 14 15 15 31 30 31 46 31 14 28 25 14 19 25 25 32 44 27 15 37 33 26 31 21 11 21 21 35 44 8 5 14 8 7 9 11 18 27 24 32 32 17 31 11 11 27 44 21 10 20 8 15 19 7 16 42 48 48 44 31 27 39 33 10 13 7 12 22 32 33 47 30 25 33 20 17 26 12 17 34 22 33 34 6 9 14 27 34 8 17 22 25 14 10 43 14 23 10 16 17 19 25 6 21 24 31 13 22 29 31 7 6 4 6 6 20 8 10 18 29 10 30 40 19 7 8 10 11 5 9 7 6 5 6 13 11 24 19 10 8 18 8 5 21 7 12 6 21 21 7 27 6 6 16 8 8 11 16 5 11 9 13 7 10 4 6 5 7 28 6 8 10 16 11 9 19 13 10 23 10 19 4 8 4 4 4 13 6 18 6 6 4 5 6 4 5 8 4 3 3 3 19 7 3 5 6 7 2 2 2 4 13 7 7 3 3 7 12 29 30 12 2 3 4 4 5 4 7 4 10 4 5 2 3 3 5 6 6 4 3 3 8 10 5 6 8 3 6 8 9 22 15 24 7 6 14 7 1 1 2 5 6 9 6 10 23 30 30 13 5 6 4 6 3 2 20 16 10 3 5	Open. Hide. 62 59 59 59 62 59 44 62 62 62 51 43 32 23 28 28 27 28 46 43 38 54 62 62 54 59 62 62 59 59 62 62 59 59 59 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 59 62 62 62 62 62 54 54 46 46 56 54 59 59 62 62 62 62 62 62 62 49 42 62 62 62 59 59 62 62 62 59 59 62 59 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 51 62 62 62 48 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 46 58 58 54 48 47 58 58 58 54 58 58 58 47 34 50 58 54 58 58 58 54 54 52 54 58 54 58 54 54 58 54 52 47 58 58 58 58 41 58 58 54 52 58 52 54 54 58 54 52 54 54 54 54 58 50 58 52 58 58 58 52 58 42 33 54 58 51 58 50 50 58 58 51 50 51 58 58 58 45 48 50 58 58 54 58 58 50 51 53 46 50 58 58 53 53 52 58 58 37 46 50 50 53 49 58 54 53 53 53 46 58 54 52 58 50 50 51 48 50 46 49 58 52 51 58 32 29 58 33 39 53 39 50 49 38 58 49 41 50 49 58 35 52 39 50 51 38 51 49 52 25 51 53 51 31 36 51 49 51 58 47 52 51 29 44 29 35 32 51 18 42 53 39 45 19 54 18 53 53 39 43 54 36 27 33 28 22 25 23 32 42 51 53 34 53 37 25 54 14 36 29 32 35 51 33 37 33 54 41 36 41 20 20 36 24 41 34 27 31 46 33 34 35 53 24 35 54 54 52 29 28 35 27 28 53 45 32 32 25 52 31 21 51 28 31 12 24 32 34 32 32 40 36 32 34 53 29 40 33 28 28 40 32 40 7 31 45 23 32 31 13 14 28 42 34 41 33 23 31 36 37 26 22 45 31 31 42 25 31 18 11 26 34 30 15 24 27 29 27 20 30 31 38 32 42 31 31 21 31 29 31 17 26 31 46 24 46 31 30 32 22 27 19 32 48 25 22 31 36 25 38 23 26 31 31 20 29 16 23 24 9 6 6 5 20 17 30 23 36 23 34 38 32 38 32 31 18 22 26 43 13 42 24 21 23 11 24 23 31 32 33 17 33 24 10 25 7 13 9 19 11 10 14 15 18 25 20 11 13 32 32 28 33 33 37 15 21 11 31 11 42 31 12 10 16 8 6 14 19 27 10 23 9 20 11 6 9 6 6 13 10 8 16 10 29 7 16 22 14 29 25 29 19 10 12 15 11 29 9 19 26 9 24 37 17 13 5 6 15 13 32 11 23 23 5 18 11 15 15 11 7 7 13 11 18 15 20 10 7 6 6 8 11 14 28 24 15 5 6 8 9 27 7 30 6 7 20 3 5 15 24 16 10 31 47 15 8 8 28 17 10 11 11 19 17 4 8 7 17 26 40 24 6 7 21 7 3 11 5 18 11 4 19 8 23 9 11 10 20 4 18 10 25 20 14 6 7 20 18 4 5 8 7 12 11 5 15 11 10 5 7 7 25 4 3 5 7 5 8 16 5 5 17 16 16 16 20 12 4 6 15 10 18 19 6 13 15 6 4 4 3 1 2 3 5 13 6 9 9 6 4 5 13 5 16 4 6 9 12 4

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_144633298_144634502
seq2: B6Ng01-291P10.b_49_1259

seq1  GAATTCACTGCTGAAAATATGGAAAATAATTTTTCTCAAAATAATACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCTGAAAATATGGAAAATAATTTTTCTCAAAATAATACACA  50

seq1  GGACACAGACGTGACAGTAGGGGAAGAAATGGCCATTTTTTCAGACAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGACGTGACAGTAGGGGAAGAAATGGCCATTTTTTCAGACAAAG  100

seq1  ATTTTCAGCAAATCATCCTCTACTTCATCTGGTAAGTGAACACTAAGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGCAAATCATCCTCTACTTCATCTGGTAAGTGAACACTAAGGGT  150

seq1  TAACAGAAATCAAGAGTCTGAGATGTAACATAGTTCTTTTAGAGATGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGAAATCAAGAGTCTGAGATGTAACATAGTTCTTTTAGAGATGAGT  200

seq1  GTGTTTGTTTCTTTGAAGACAAGGTCTTACAAGTTCCATAGTACAAGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGTTTCTTTGAAGACAAGGTCTTACAAGTTCCATAGTACAAGGTA  250

seq1  GTATATCACTTTCTATGTAGCCTAGGTTGGTAAAGAATTTCTGATGTTCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATCACTTTCTATGTAGCCTAGGTTGGTAAAGAATTTCTGATGTTCG  300

seq1  TCCTGTCTCAGTCTTCCAGTGATGAAACTAAAAGAAGGTGTTATATGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTCAGTCTTCCAGTGATGAAACTAAAAGAAGGTGTTATATGTTA  350

seq1  GGTATCATAATTACTTTTCTTTGTAAAAAAACACTATGATCAAGGCAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCATAATTACTTTTCTTTGTAAAAAAACACTATGATCAAGGCAGTG  400

seq1  TACAAAAGGAAGAGGGTCAGAAACCTTGATCATCATGGGGTGGGCAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAGGAAGAGGGTCAGAAACCTTGATCATCATGGGGTGGGCAGTGT  450

seq1  ATTGCAGCAGGAGGAAGGCCCCTTCAACTATTTCAGGAAACATTTTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAGCAGGAGGAAGGCCCCTTCAACTATTTCAGGAAACATTTTATTT  500

seq1  TTTATTTTAATCATTGGGAATTTTGAATTTATAAGGTACAAAAATAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTAATCATTGGGAATTTTGAATTTATAAGGTACAAAAATAGATA  550

seq1  GTTTGTGATTGTCATTAATTGTAAATATTATTCTCATTTTGTCCTCATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGATTGTCATTAATTGTAAATATTATTCTCATTTTGTCCTCATAT  600

seq1  AAATTTTTATCTTAAGCTATAGTGTAAAAATAGTTTACTACCCTCAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTATCTTAAGCTATAGTGTAAAAATAGTTTACTACCCTCAAAAA  650

seq1  CTAATGGTATGAACCAGAAATCTGGAGTAGAGAGATACCCTAGTATTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGGTATGAACCAGAAATCTGGAGTAGAGAGATACCCTAGTATTTAA  700

seq1  AAGTGCTTGCTAGTGTTCCAGATGACCCAAGTTCAGCTCTCAACACCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTTGCTAGTGTTCCAGATGACCCAAGTTCAGCTCTCAACACCCAC  750

seq1  ATCAGTGGTCCTATAACTTAAATGCAGTTTCAAGGGCTTTAACCCCTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGGTCCTATAACTTAAATGCAGTTTCAAGGGCTTTAACCCCTCCT  800

seq1  CTGGTTTCTGTAAGCACCACACACATGGGGCATAATCTCACATAAAACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTCTGTAAGCACCACACACATGGGGCATAATCTCACATAAAACAC  850

seq1  ACACATAAACACACACACACACACACACACACACACACACACACACACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATAAACACACACACACACACACACACACACACACACACACACACAC  900

seq1  ACAAACCTATACACATTAAAAAATCACGTGAAGATAGAAATTAAGTGAAA  950
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACAAACCTATACACA-TAAAAAATCACGTGAAGATAGAAATTAAGTGAAA  949

seq1  TGGGATATGAAA-CACATTCTGGAA-CTTTCCAGAGGAAAAATTTATACT  998
      |||||||||||| |||||||||||| ||||||||||||||||||||||||
seq2  TGGGATATGAAACCACATTCTGGAACCTTTCCAGAGGAAAAATTTATACT  999

seq1  TCCCTGTACTTCTAAACTGG-CATAGGTAACTGGGTCATGGG---ACAAG  1044
      |||||||||||||||||||| |||||||||||||  ||||||   |||||
seq2  TCCCTGTACTTCTAAACTGGCCATAGGTAACTGGTCCATGGGGACACAAG  1049

seq1  AATTTTG--ATATGTAT-CAGTAG-TTCAGCTTAACAGTAAGAACTAGTT  1090
      || ||||  |||||||| |||||| | |||| ||||||| ||| ||||| 
seq2  AAATTTGATATATGTATCCAGTAGCTCCAGCCTAACAGT-AGACCTAGTA  1098

seq1  ATTCTTAAGCTGTTAT-ATAAGCAT-CTGGTGTTAAACAGTGGTTGAACA  1138
      || ||||  ||||||| |||  ||| ||||||| |||| || || || | 
seq2  ATCCTTAGCCTGTTATAATAGCCATCCTGGTGTAAAAC-GT-GTGGACCC  1146

seq1  GGAAAATTGTCTGCAGGGTAAGAGCACTTGCAAAGGAGAATGGGGACATG  1188
      |||||||   ||||   ||| || ||||||| |||   ||| ||  | ||
seq2  GGAAAATGTCCTGC-CAGTAGGA-CACTTGCCAAGATAAATTGG--CCTG  1192

seq1  GAA--CCCACACAAAAAGC  1205
      |||  ||||||||||||||
seq2  GAAACCCCACACAAAAAGC  1211

seq1: chrX_144746035_144747199
seq2: B6Ng01-291P10.g_72_1232 (reverse)

seq1  ATTGTAGTCTATTCCTGAGCCACAGAGAAAATCAGTTGCTAC--GTACAT  48
      ||||||||  ||||||||| ||||| | || |||| ||||||   |||||
seq2  ATTGTAGTTCATTCCTGAG-CACAG-GGAATTCAG-TGCTACCGTTACAT  47

seq1  TTGACTGG-CCTCTTGGAGAAACAGGAGCAAACATTTTGAGGTCTAAAAT  97
      |||||||| |||  |||||||||| |||| ||||  ||||||||| ||||
seq2  TTGACTGGCCCTTCTGGAGAAACA-GAGC-AACA--TTGAGGTCT-AAAT  92

seq1  GATCCCTGAGCAAGGGGTTGAGGAATAATTAC-ATGCT-CACTGTGCACA  145
      ||| ||||||||| ||||||||||||| | || ||||| |||||||||||
seq2  GAT-CCTGAGCAA-GGGTTGAGGAATATTAACAATGCTCCACTGTGCACA  140

seq1  TAACCTAATTTTTCTTTTCTTC-TCTGCCAGTATCTCTTGTGTGT-GTGT  193
      |||||||||||| ||||||||| |||||||||||||||   |||| ||||
seq2  TAACCTAATTTTCCTTTTCTTCTTCTGCCAGTATCTCTGTGGTGTGGTGT  190

seq1  ATGATGGTGAAGGTATGACTACATCTCTGT-GTGCTTCTGTTAGTATGTG  242
      ||||| ||||| |||||||||||||||||| |||| ||||||||||||||
seq2  ATGAT-GTGAAAGTATGACTACATCTCTGTGGTGC-TCTGTTAGTATGTG  238

seq1  AACAGGAGCACATGTGTGTGTAGTAGTGCTGTTAGGTTTGTCTACTTCCA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAGCACATGTGTGTGTAGTAGTGCTGTTAGGTTTGTCTACTTCCA  288

seq1  TGTGGACGCTTACTGTTACCACTGACACTTGTTCATCAGGAATCCTCCTC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGACGCTTACTGTTACCACTGACACTTGTTCATCAGGAATCCTCCTC  338

seq1  ATGTTTGCTGAGATCAATCTCTAATAGGGACCTGGGGCTTAGCAGTCAGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGCTGAGATCAATCTCTAATAGGGACCTGGGGCTTAGCAGTCAGG  388

seq1  CCAGGGTAGGTGTCCACTACAATATCCCAGGGATTCTCTGAGCTCTGCCT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTAGGTGTCCACTACAATATCCCAGGGATTCTCTGAGCTCTGCCT  438

seq1  TCCCACATGAGTGAATACTGTTATAAATCATGATGCTCCGCATATTATTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACATGAGTGAATACTGTTATAAATCATGATGCTCCGCATATTATTT  488

seq1  CCATATATTGTGTCTTTGTGATTGATTCAGATGTCATGTGGCATGCTATG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATATTGTGTCTTTGTGATTGATTCAGATGTCATGTGGCATGCTATG  538

seq1  GTGCATATATGTGTGGATTAGCCCAAAAGGTGAAGGAGTTGCTTCATTAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATATATGTGTGGATTAGCCCAAAAGGTGAAGGAGTTGCTTCATTAT  588

seq1  TTTCAAAATGCCATTCCCAGGGATCCAACATAGGTTGCCCAGTAAGGGAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAATGCCATTCCCAGGGATCCAACATAGGTTGCCCAGTAAGGGAG  638

seq1  CAACTACAGTGACTCACTGAGCCATTTCACTGGTCCTTGAGTTGGTGGTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTACAGTGACTCACTGAGCCATTTCACTGGTCCTTGAGTTGGTGGTT  688

seq1  TCTGCAGGGAATCTGGGCATCTAATTCAGGTCCTAAGGCATTTAAGGAAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGGGAATCTGGGCATCTAATTCAGGTCCTAAGGCATTTAAGGAAA  738

seq1  GAGTTTAACAGCTGTTATATGTCTCCAGTTCTTTTGACAGAGAAAACAAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTAACAGCTGTTATATGTCTCCAGTTCTTTTGACAGAGAAAACAAA  788

seq1  GCCAGGAAAATTATTCCCATTTTGATTTCTAATCCAGCCAACAAGACATC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAAAATTATTCCCATTTTGATTTCTAATCCAGCCAACAAGACATC  838

seq1  AAGCTGGGTACACAGAAAATCCAGGGGCCAGCTGTTGGGGGGAAAAGCAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGGTACACAGAAAATCCAGGGGCCAGCTGTTGGGGGGAAAAGCAT  888

seq1  TCTCACTTTCAGGTTACACATTTCACGTAATTTATGCATCTTTCATTGGT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTTTCAGGTTACACATTTCACGTAATTTATGCATCTTTCATTGGT  938

seq1  ACATTGAGAGTTTGGGAGCAAAGAACACTTACCCTATTACCATTTTCTGA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAGAGTTTGGGAGCAAAGAACACTTACCCTATTACCATTTTCTGA  988

seq1  CCTTTCATTTGAAATTATGCTGCGTTTGTTTATGTGTTTGTGTGTTCATT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCATTTGAAATTATGCTGCGTTTGTTTATGTGTTTGTGTGTTCATT  1038

seq1  GCTTCGTTTATTTACCTCTTAATTTTTTATATGAAGCTACAGAGTGAAGG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGTTTATTTACCTCTTAATTTTTTATATGAAGCTACAGAGTGAAGG  1088

seq1  GGCAACCTGTCTTGAAAAAAATACTTTGGTCAAAAGCCTGTCCTAAAATC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACCTGTCTTGAAAAAAATACTTTGGTCAAAAGCCTGTCCTAAAATC  1138

seq1  CAGTATTCACTGAGCCTGAATTC  1165
      |||||||||||||||||||||||
seq2  CAGTATTCACTGAGCCTGAATTC  1161

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Alignment Information