BAC Information

Click to search

BAC

Clone NameB6Ng01-295D09
ChromosomeX (Build37)
Map Location 153,909,579 - 153,910,713
singlet/doubletsinglet
Overlap geneSms
Upstream gene4930503H13Rik, LOC640803, LOC434885, Phex, Gm1947
Downstream geneLOC100041181, EG625253, Mbtps2, LOC100040239, LOC667460, LOC667465, Smpx, Klhl34, Cnksr2, EG667483, LOC671033, LOC667487
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295D09.bB6Ng01-295D09.g
ACCGA091137GA091138
length1,1311,162
definitionB6Ng01-295D09.b B6Ng01-295D09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttcccggcaaaaccatgcccattggcaatcccatttgacaag
aaataatccagcttgctttgctcttctgaaattggttttccgagagtaca
acagaaggcctgaattgcatctccagaactacggcatttaagacctccca
gaaaagtacttctgggggcttcagagatggatcagtggttaaaagcactg
gctgctcttctagaggagcggaattcaattcccagtacccacgtggtggc
tcccaaccatctgtccatccagctccaggtgggaactgatacctcttctg
gcctctgcaggcaccatgatgcagttatggcaccatgatgcatgcaccat
gatgcagttatgcaggcaaagcacccacacacagtaaaaagaaataaaaa
ggaaaaacaagtcttttatttgtaaacttggtcacatgaactaaagctgt
caaattcggtttgtacttggcactgcagcctgatggaagtccactgtgca
ggtggcagagcttctgttattccttattaaatatggaagccacggtgtca
ttatgcaggcttccttggctacaccacatggtttttgttttgaaggtgta
taaaagaaataatcattcctggtaaatggccttaaggttgtgttcttgct
ggcatgctataaaagaacacaaatgaaggggaaaatccagcattatcttg
gatgtgatgggccaggaacctggcctggggagcaagtataaactcagtta
cctaggccaaggaaatgggatgccttagatctaatataatatcctagatt
gccggccaagcgcagcatggtggccatccctttttctcaatggcataatt
agcagaaaggtaccatatggactaaaaacagccctctggccagtttcaag
ataaatgccaaaggttaaaaaaggaatccaatttgaaatgttactagtgt
ctacactatgggcatagcctctaattcagtaaaaccaggcagatcagaat
gaatttctgacagccaattctttacttgttcacatgtccagtgtttctgt
gctctgatttctgtgagtggtgctgtctgtaggggctattgggatcattc
aattggcttaactgcccacttcacactcagt
gaattctcctctgaggaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctaactaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccctgccctgcgtagtgcgtcagcc
ctgcgcagagaggcagtgcgcagagaggcagtgcgcagactcattcattc
ccagagaggaacaaaggaaaatacaacaggcatttccagtctttgaagga
gccgagggtgggcgtgtccacgctccggtagaatacttacaaattaaaga
actcgccgagtcggtccgtaaatacggaaccaatgctaattttaccttgg
tgcagttagacaggcttgccggcatggcactaactcctgccgactggcaa
acggttgtaaaagccgctctccctagtatgggcaaatatatggaatggag
agctctttggcatgaaactgcacaagcgcaggcccgagcaaacgcagctg
ctttgactccagagcagagagattggacttttgacttgttaacgggtcag
ggagcttattctgctgatcagacaaactaccattggggagcttatgccca
gatttcttccacggctattagggcctggaaggcgctctctcgagcaggtg
aaaccactgggcagttgacaaagataatccagggacctcaggaatccttc
tcagattttgtggccagaatgacagaggcagcagagcgtatttttggaga
gtcagagcaagctgcgcctctgatagaacagctaatctatgagcaagcca
caaaggagtgccgagcggccatagccccaagaaagaacaaaggcttacag
actggctcagggtctgtcgagagcttgggggacctctcaccaatgcaggc
ttagcggccgccatcctccaatctcagaacggctcatgggcagaaatatc
agaggacatgtttttatttgcgaaagcctgggcattagaaagattgcaga
gctcagataaacaggaggactctcactcttggctctagtgtgcaggttat
ctagagctgaccagtgtcgcctctgtgaggatattagagggccagaaatt
tccttttccgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_153909579_153910713
seq2: B6Ng01-295D09.b_46_1176

seq1  GAATTCTCTTCCCGGCAAAACCATGCCCATTGGCAATCCCATTTGACAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCCCGGCAAAACCATGCCCATTGGCAATCCCATTTGACAAG  50

seq1  AAATAATCCAGCTTGCTTTGCTCTTCTGAAATTGGTTTTCCGAGAGTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCCAGCTTGCTTTGCTCTTCTGAAATTGGTTTTCCGAGAGTACA  100

seq1  ACAGAAGGCCTGAATTGCATCTCCAGAACTACGGCATTTAAGACCTCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGGCCTGAATTGCATCTCCAGAACTACGGCATTTAAGACCTCCCA  150

seq1  GAAAAGTACTTCTGGGGGCTTCAGAGATGGATCAGTGGTTAAAAGCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTACTTCTGGGGGCTTCAGAGATGGATCAGTGGTTAAAAGCACTG  200

seq1  GCTGCTCTTCTAGAGGAGCGGAATTCAATTCCCAGTACCCACGTGGTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCTTCTAGAGGAGCGGAATTCAATTCCCAGTACCCACGTGGTGGC  250

seq1  TCCCAACCATCTGTCCATCCAGCTCCAGGTGGGAACTGATACCTCTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACCATCTGTCCATCCAGCTCCAGGTGGGAACTGATACCTCTTCTG  300

seq1  GCCTCTGCAGGCACCATGATGCAGTTATGGCACCATGATGCATGCACCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGCAGGCACCATGATGCAGTTATGGCACCATGATGCATGCACCAT  350

seq1  GATGCAGTTATGCAGGCAAAGCACCCACACACAGTAAAAAGAAATAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGTTATGCAGGCAAAGCACCCACACACAGTAAAAAGAAATAAAAA  400

seq1  GGAAAAACAAGTCTTTTATTTGTAAACTTGGTCACATGAACTAAAGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAACAAGTCTTTTATTTGTAAACTTGGTCACATGAACTAAAGCTGT  450

seq1  CAAATTCGGTTTGTACTTGGCACTGCAGCCTGATGGAAGTCCACTGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCGGTTTGTACTTGGCACTGCAGCCTGATGGAAGTCCACTGTGCA  500

seq1  GGTGGCAGAGCTTCTGTTATTCCTTATTAAATATGGAAGCCACGGTGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAGAGCTTCTGTTATTCCTTATTAAATATGGAAGCCACGGTGTCA  550

seq1  TTATGCAGGCTTCCTTGGCTACACCACATGGTTTTTGTTTTGAAGGTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCAGGCTTCCTTGGCTACACCACATGGTTTTTGTTTTGAAGGTGTA  600

seq1  TAAAAGAAATAATCATTCCTGGTAAATGGCCTTAAGGTTGTGTTCTTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAAATAATCATTCCTGGTAAATGGCCTTAAGGTTGTGTTCTTGCT  650

seq1  GGCATGCTATAAAAGAACACAAATGAAGGGGAAAATCCAGCATTATCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCTATAAAAGAACACAAATGAAGGGGAAAATCCAGCATTATCTTG  700

seq1  GATGTGATGGGCCAGGAACCTGGCCTGGGGAGCAAGTATAAACTCAGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGATGGGCCAGGAACCTGGCCTGGGGAGCAAGTATAAACTCAGTTA  750

seq1  CCTAGGCCAAGGAAATGGGATGCCTTAGATCTAATATAATATCCTAGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGCCAAGGAAATGGGATGCCTTAGATCTAATATAATATCCTAGATT  800

seq1  GCCGGCCAAGCGCAGCATGGTGGCCATCCCTTTTTCTCAATGGCATAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGCCAAGCGCAGCATGGTGGCCATCCCTTTTTCTCAATGGCATAATT  850

seq1  AGCAGAAAGGTACCATATGGACTAAAAACAGCCCTCTGGCCAGTTTCAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAGGTACCATATGGACTAAAAACAGCCCTCTGGCCAGTTTCAAG  900

seq1  ATAAATGCCAAAGGTTAAAAAAGGAATCCAATTTGAAATGTTACTAGTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGCCAAAGGTTAAAAAAGGAATCCAATTTGAAATGTTACTAGTGT  950

seq1  CTACACTATGGGCATAGCCTCTAATTCAGTAAAACCAGGCAGATCAGAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTATGGGCATAGCCTCTAATTCAGTAAAACCAGGCAGATCAGAAT  1000

seq1  GAATTTCTGACAGGCCAATTCTTTACTTGTTCACATGTCCAGTGTTTCTG  1050
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAATTTCTGACA-GCCAATTCTTTACTTGTTCACATGTCCAGTGTTTCTG  1049

seq1  TGGCTCCTGATTCCTGTGAGTGTGCCTGTCTGTAGGGGGCTATTGGGATC  1100
      | ||| |||||| |||||||||   ||||||||| |||||||||||||||
seq2  T-GCT-CTGATTTCTGTGAGTGGTGCTGTCTGTA-GGGGCTATTGGGATC  1096

seq1  ATTCCATTTGCTTTACTGCCCACTTCACACTCAGT  1135
      |||| ||| |||| |||||||||||||||||||||
seq2  ATTCAATTGGCTTAACTGCCCACTTCACACTCAGT  1131