BAC Information

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BAC

Clone NameB6Ng01-295K07
ChromosomeX (Build37)
Map Location 75,092,108 - 75,093,259
singlet/doubletsinglet
Overlap genePbsn
Upstream geneLOC385474, EG436208, LOC546331, LOC100041212, Tbl1x, EG628893, LOC667606, Prkx
Downstream geneOTTMUSG00000017866, LOC100042001, 5430402E10Rik, LOC628976, Obp1a, EG546335, EG628991, LOC236874, EG667658, 4930480E11Rik, EG667672, Prrg1, LOC667679, LOC667684, 4921509A18Rik, LOC667700
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295K07.bB6Ng01-295K07.g
ACCGA091458GA091459
length1,1901,160
definitionB6Ng01-295K07.b B6Ng01-295K07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagggccaagaagtgagagtgagtgggtagggaagcagggcagg
gggaaggtatagggaactttgaggacagcatttaaaatgtatataaagaa
aatataattaaaaagaaaacattgacacaacaatcaaagaaaatgcaaat
tatcctaacccaaaacatccaggaaatccaggacaaaatgagaagatcaa
acttaaggatcataggtataaacaagaaagtagatttccaacttaaaggg
ccagtaaatatcttcaagaaaattatagaataaaacttccccaacctaag
gaaagagatgttcatgaacatacaaggagcctacagaactccaaatagtt
tggaccagaaaagaaatccctcccataaaataataatcaaaacaccaaat
gcacaaaacaaagaaagaatattaaaagcgttagggggaaaaggtcaagt
accaaatgaaggcagatctatcaaaattacaccgaacttctccccagagc
ctatgaaagtcagacaatcctgggcagatgtcatagaaaccttaacagaa
cataaatgccatcccagactactatacccagcaaaactctcaattaccat
agatgtagaaaccaaggtattcaatgacaaaaccaaatttacacaatatc
tttccacaaatccagcacttcaaaagataataatgggaaaattccagcac
aagtagggaaactgtgccctagagaaagcaagaaagtaattttgcaacaa
acctaatagaagatagccacatgaacagaattccatctctaacaacaaaa
acagcaggaagcaacaatgacttttccttaatatctactaacatcaatgg
gactcaattcaccaatttaaaaaaaaatagactaacagactggttacata
aacagaacccaacattttgctgcatagaggaaacccacctcagggagaaa
gacagacactacctccaagtgaaacgctggaaaacattttccaagcaaat
agtcccagagacaagctggagtagccattctacattgaataaaatcgact
tcacttaaagttatcaaaaaagaacagaggagccacgccataccatcaag
tttaaagttgcaagaaaggtctcattctgaacttcttatgctcatgcaat
gccatcccattcattagagacctttagttaagcgctccag
gaattccaggacagccagggttatataaggagaacctgtctttaaaaata
tataaattagccaggtagtgatgacacacacctctaatcccagaaggtag
aggctctgattttgagaccagcctggtctacagtgtgagtttcagggtag
ccagggctacacagagaaacactgtccagaaaaaatacaatatgtttatt
aatttatttattatatgtgtatataataaataaaaattaaaaagtttatt
ttttactccatattgagttcaaagcaagaacaatgtacagagactctcag
aaacctgaatttataaatagctaatttatgaaaaggttcaaatatcagca
cataattaacaaaaactttgttcctcccagatagaaatatatcctcgatg
gataatatcactcatatcaatatagtttaaaagcactgaaactatcccaa
aatttattttgatatatcttctctaccacctgggcttttgagcagtgata
aatagaaaattaagtaattgttattttggtaaattgtcttgtaatgtttg
acttcaacaaggagctgattttgaatatgttttccaattgtactttacac
ccaggcctgtctctttcatatatctatatactatctaaatctacctatgt
atatatttatgtatatacatgcatgtatccatctattatttatctatata
tattttctatctatctatctatctatctatctatctatctatctatctat
ctatcatctattatctgtctacctacatatctatgtatatatctatcaca
tgtctagctaatttgtctattatctaacacctacatttgtgtatatgtat
catttatctacttttatatctattaattatgtatctatcacctacatagt
catatatgtatcatctatctaattttatatctattatctatgtataaatc
atctacatataatcaccacccatctcttgatattattaattttactttgg
gcttgctataaaataaataatttactcttttctaaattaaaagtacagct
atcataatgttcttttcaggtccacagaagagcaaagttgatacaggatc
cttccacttaagtgcctgtggtgtgtcactgatatgaaggtttgaacttg
gaaaacattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_75092108_75093259
seq2: B6Ng01-295K07.g_64_1223

seq1  GAATTCCAGGACAGCCAGGGTTATATAAGGAGAACCTGTCTTTAAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGTTATATAAGGAGAACCTGTCTTTAAAAATA  50

seq1  TATAAATTAGCCAGGTAGTGATGACACACACCTCTAATCCCAGAAGGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTAGCCAGGTAGTGATGACACACACCTCTAATCCCAGAAGGTAG  100

seq1  AGGCTCTGATTTTGAGACCAGCCTGGTCTACAGTGTGAGTTTCAGGGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTGATTTTGAGACCAGCCTGGTCTACAGTGTGAGTTTCAGGGTAG  150

seq1  CCAGGGCTACACAGAGAAACACTGTCCAGAAAAAATACAATATGTTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCTACACAGAGAAACACTGTCCAGAAAAAATACAATATGTTTATT  200

seq1  AATTTATTTATTATATGTGTATATAATAAATAAAAATTAAAAAGTTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTATTATATGTGTATATAATAAATAAAAATTAAAAAGTTTATT  250

seq1  TTTTACTCCATATTGAGTTCAAAGCAAGAACAATGTACAGAGACTCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTCCATATTGAGTTCAAAGCAAGAACAATGTACAGAGACTCTCAG  300

seq1  AAACCTGAATTTATAAATAGCTAATTTATGAAAAGGTTCAAATATCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGAATTTATAAATAGCTAATTTATGAAAAGGTTCAAATATCAGCA  350

seq1  CATAATTAACAAAAACTTTGTTCCTCCCAGATAGAAATATATCCTCGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTAACAAAAACTTTGTTCCTCCCAGATAGAAATATATCCTCGATG  400

seq1  GATAATATCACTCATATCAATATAGTTTAAAAGCACTGAAACTATCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATATCACTCATATCAATATAGTTTAAAAGCACTGAAACTATCCCAA  450

seq1  AATTTATTTTGATATATCTTCTCTACCACCTGGGCTTTTGAGCAGTGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTTGATATATCTTCTCTACCACCTGGGCTTTTGAGCAGTGATA  500

seq1  AATAGAAAATTAAGTAATTGTTATTTTGGTAAATTGTCTTGTAATGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAAATTAAGTAATTGTTATTTTGGTAAATTGTCTTGTAATGTTTG  550

seq1  ACTTCAACAAGGAGCTGATTTTGAATATGTTTTCCAATTGTACTTTACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAACAAGGAGCTGATTTTGAATATGTTTTCCAATTGTACTTTACAC  600

seq1  CCAGGCCTGTCTCTTTCATATATCTATATACTATCTAAATCTACCTATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCTGTCTCTTTCATATATCTATATACTATCTAAATCTACCTATGT  650

seq1  ATATATTTATGTATATACATGCATGTATCCATCTATTATTTATCTATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTATGTATATACATGCATGTATCCATCTATTATTTATCTATATA  700

seq1  TATTTTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  750
      |||||    |||||||||||||||||||||||||||||||||||||||||
seq2  TATTT----TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  746

seq1  CTATCTATCATCTATTATCTGTCTACCTACATATCTATGTATATATCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATCATCTATTATCTGTCTACCTACATATCTATGTATATATCTAT  796

seq1  CACATGTCTAGCTAA-TTGTCTATTATCTAACACCTACATTTGTGTATAT  849
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CACATGTCTAGCTAATTTGTCTATTATCTAACACCTACATTTGTGTATAT  846

seq1  GTATCATTTATCTACTTTTATATCTATTAATTATGTATCTATCACCTACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATTTATCTACTTTTATATCTATTAATTATGTATCTATCACCTACA  896

seq1  TAGTCATATATGTATCATCTATCTAATTTTATATCTATTATCTATGTATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATATATGTATCATCTATCTAATTTTATATCTATTATCTATGTATA  946

seq1  AATCATCTACATATAATCACCACCCATCTCTTGATATTATTTATTTTACT  999
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AATCATCTACATATAATCACCACCCATCTCTTGATATTATTAATTTTACT  996

seq1  TT-GGCTTGCTATAAAATAAATAAATTAACTC-TTTCTAAATTAAAAGTA  1047
      || ||||||||||||||||||| |||| |||| |||||||||||||||||
seq2  TTGGGCTTGCTATAAAATAAAT-AATTTACTCTTTTCTAAATTAAAAGTA  1045

seq1  CAGCTATCAT-ATGTTCTTTTCAGGGCCACAG-AGAGCAAAG-TGATACA  1094
      |||||||||| |||||||||||||| |||||| ||||||||| |||||| 
seq2  CAGCTATCATAATGTTCTTTTCAGGTCCACAGAAGAGCAAAGTTGATAC-  1094

seq1  AGGATCCT--CACTT-AGTG-CTGTGTGTGT-TCACTGATATGA--GTGT  1137
      ||||||||  ||||| |||| ||||| |||| ||||||||||||  || |
seq2  AGGATCCTTCCACTTAAGTGCCTGTG-GTGTGTCACTGATATGAAGGTTT  1143

seq1  TGACT--GAAAACATTT  1152
        |||  ||||||||||
seq2  GAACTTGGAAAACATTT  1160