MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-296A19
Chromosome	X (Build37)
Map Location	4,421,497 - 4,577,133
singlet/doublet	doublet
Overlap gene	LOC670673, LOC100042254, LOC100043934, LOC100042267
Upstream gene	OTTMUSG00000016411, LOC668961, LOC100042159, LOC100042168, LOC627187, LOC100042185, OTTMUSG00000016407, OTTMUSG00000016437, OTTMUSG00000016420, LOC547057, EG546327, EG668965, LOC546185, LOC100043933
Downstream gene	LOC100042275, LOC668967, LOC434724, LOC100043935, LOC668968, LOC546182, Mycs, LOC668969, LOC668970, OTTMUSG00000016453, LOC627412, LOC436185, LOC668971, LOC100043936, LOC668972
Link	Open Mouse BAC browser

Click to get alignment info.

name	OTTMUSG00000016411 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668960 MGI:3709278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC668961 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668961
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins

name	LOC100042159 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC100042168 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC627187 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627187
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	LOC100042185 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs

name	OTTMUSG00000016407 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627264 MGI:3709183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 11 ESTs, 10 Proteins

name	OTTMUSG00000016437 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668964 MGI:3709272
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	OTTMUSG00000016420 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668963 MGI:3709274
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC547057 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	EG546327 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546327 MGI:3704140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST pseudo : _no_value

name	EG668965 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668965 MGI:3646752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs

name	LOC546185 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 14 Proteins

name	LOC100043933 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043933
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC670673 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670673
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC100042254 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042254
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC100043934 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043934
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins pseudo : _no_value

name	LOC100042267 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042267
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins

name	LOC100042275 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 14 Proteins

name	LOC668967 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668967
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC434724 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 1 Protein

name	LOC100043935 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043935
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC668968 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC546182 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546182
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein

name	Mycs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17870 MGI:1332242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668969 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668969
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC668970 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668970
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	OTTMUSG00000016453 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434725 MGI:3709265
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins

name	LOC627412 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627412
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 202 ESTs, 10 Proteins pseudo : _no_value

name	LOC436185 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:436185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins

name	LOC668971 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668971
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins

name	LOC100043936 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043936
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC668972 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 12 Proteins pseudo : _no_value

name	OTTMUSG00000016411 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406949 GeneID:668960 MGI:3709278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : predicted gene, OTTMUSG00000016411 transcript_id : XM_001006594.1

name	LOC668961 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94406951 GeneID:668961
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins product : similar to 4930408F14Rik protein transcript_id : XM_001006595.1

name	LOC100042159 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270905 GeneID:100042159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : similar to mgclh transcript_id : XM_001474533.1

name	LOC100042168 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270907 GeneID:100042168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : similar to mgclh transcript_id : XM_001474553.1

name	LOC100042185 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270909 GeneID:100042185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs product : similar to 4930408F14Rik protein transcript_id : XM_001474570.1

name	OTTMUSG00000016407 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406954 GeneID:627264 MGI:3709183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 11 ESTs, 10 Proteins product : predicted gene, OTTMUSG00000016407 transcript_id : XM_891923.2

name	OTTMUSG00000016437 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406957 GeneID:668964 MGI:3709272
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : predicted gene, OTTMUSG00000016437 transcript_id : XM_001006598.1

name	OTTMUSG00000016420 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406955 GeneID:668963 MGI:3709274
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : predicted gene, OTTMUSG00000016420 transcript_id : XM_001006597.1

name	EG668965 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270911 GeneID:668965 MGI:3646752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs product : predicted gene, EG668965 transcript_id : XM_001474644.1

name	LOC100042254 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270914 GeneID:100042254
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : similar to mgclh transcript_id : XM_001474674.1

name	LOC100042267 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270916 GeneID:100042267
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 26 Proteins product : similar to 4930408F14Rik protein transcript_id : XM_001474694.1

name	LOC100042275 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270918 GeneID:100042275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 14 Proteins product : similar to RIKEN cDNA 1700017G21 gene transcript_id : XM_001474710.1

name	LOC434724 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94406961 GeneID:434724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 1 Protein product : similar to RIKEN cDNA 1700017G21 gene transcript_id : XM_486608.4

name	LOC546182 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270920 GeneID:546182
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein product : similar to 4930408F14Rik protein transcript_id : XM_001487800.1

name	Mycs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754769 GeneID:17870 MGI:1332242
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myc-like oncogene, s-myc protein transcript_id : NM_010850.1

name	OTTMUSG00000016453 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406963 GeneID:434725 MGI:3709265
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 12 ESTs, 15 Proteins product : predicted gene, OTTMUSG00000016453 transcript_id : XM_486609.4

name	LOC436185 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:82999675 GeneID:436185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins product : similar to SMPTB transcript_id : XM_488311.2

name	LOC668971 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94406964 GeneID:668971
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins product : similar to SMPTB transcript_id : XM_001006607.1

name	LOC100043936 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270925 GeneID:100043936
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001481245.1

name	OTTMUSG00000016411 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406950 GeneID:668960 MGI:3709278
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001006594.1

name	LOC668961 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94406952 GeneID:668961
definition	codon_start : 1 product : similar to 4930408F14Rik protein protein_id : XP_001006595.1

name	LOC100042159 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270906 GeneID:100042159
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474583.1

name	LOC100042168 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270908 GeneID:100042168
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474603.1

name	LOC100042185 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270910 GeneID:100042185
definition	codon_start : 1 product : similar to 4930408F14Rik protein protein_id : XP_001474620.1

name	OTTMUSG00000016407 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82999652 GeneID:627264 MGI:3709183
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897016.1

name	OTTMUSG00000016437 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406958 GeneID:668964 MGI:3709272
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001006598.1

name	OTTMUSG00000016420 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406956 GeneID:668963 MGI:3709274
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001006597.1

name	EG668965 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270912 GeneID:668965 MGI:3646752
definition	codon_start : 1 product : similar to 4930408F14Rik protein protein_id : XP_001474694.1

name	LOC100042254 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270915 GeneID:100042254
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474724.1

name	LOC100042267 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270917 GeneID:100042267
definition	codon_start : 1 product : similar to 4930408F14Rik protein protein_id : XP_001474744.1

name	LOC100042275 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270919 GeneID:100042275
definition	codon_start : 1 product : similar to RIKEN cDNA 1700017G21 gene protein_id : XP_001474760.1

name	LOC434724 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:51771883 GeneID:434724
definition	codon_start : 1 product : hypothetical protein protein_id : XP_486608.1

name	LOC546182 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270921 GeneID:546182
definition	codon_start : 1 product : similar to 4930408F14Rik protein protein_id : XP_001487850.1

name	Mycs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754770 CCDS:CCDS29953.1 GeneID:17870 MGI:1332242
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0050875 - cellular physiological process [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation product : myc-like oncogene, s-myc protein protein_id : NP_034980.1

name	OTTMUSG00000016453 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51771887 GeneID:434725 MGI:3709265
definition	codon_start : 1 product : hypothetical protein protein_id : XP_486609.1

name	LOC436185 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82999676 GeneID:436185
definition	codon_start : 1 product : similar to SMPTB protein_id : XP_488311.2

name	LOC668971 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94406965 GeneID:668971
definition	codon_start : 1 product : similar to SMPTB protein_id : XP_001006607.1

name	LOC100043936 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270926 GeneID:100043936
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481295.1

name	LOC627187 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627187
definition	number : 2 pseudo : _no_value

name	LOC627187 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627187
definition	number : 1 pseudo : _no_value

name	LOC547057 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547057
definition	number : 2 pseudo : _no_value

name	LOC547057 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547057
definition	number : 1 pseudo : _no_value

name	LOC100043933 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043933
definition	number : 1 pseudo : _no_value

name	LOC100043933 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043933
definition	number : 2 pseudo : _no_value

name	LOC670673 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670673
definition	number : 3 pseudo : _no_value

name	LOC670673 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670673
definition	number : 2 pseudo : _no_value

name	LOC670673 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670673
definition	number : 1 pseudo : _no_value

name	LOC100043934 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043934
definition	number : 2 pseudo : _no_value

name	LOC100043934 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043934
definition	number : 1 pseudo : _no_value

name	LOC668967 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668967
definition	number : 1 pseudo : _no_value

name	LOC668967 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668967
definition	number : 2 pseudo : _no_value

name	LOC668967 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668967
definition	number : 3 pseudo : _no_value

name	LOC100043935 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043935
definition	number : 1 pseudo : _no_value

name	LOC100043935 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043935
definition	number : 2 pseudo : _no_value

name	LOC668968 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668968
definition	number : 3 pseudo : _no_value

name	LOC668968 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668968
definition	number : 2 pseudo : _no_value

name	LOC668968 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668968
definition	number : 1 pseudo : _no_value

name	LOC668969 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668969
definition	number : 2 pseudo : _no_value

name	LOC668969 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668969
definition	number : 1 pseudo : _no_value

name	LOC668970 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668970
definition	number : 1 pseudo : _no_value

name	LOC668970 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668970
definition	number : 2 pseudo : _no_value

name	EG546327 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149270924 GeneID:546327 MGI:3704140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG546327 pseudo : _no_value transcript_id : XR_035060.1

name	LOC546185 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270913 GeneID:546185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 14 Proteins product : similar to Germ cell-less protein-like 2 (mGclh) transcript_id : XR_031864.1

name	LOC627412 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270922 GeneID:627412
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 202 ESTs, 10 Proteins product : hypothetical LOC627412 pseudo : _no_value transcript_id : XR_031930.1

name	LOC668972 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270923 GeneID:668972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 12 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_002276.2

clone name	MSMg01-358N14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-352B23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-408A19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-495F17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-167D05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-215I04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-504B09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-513N02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-451C12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-491C03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-528G01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-531F12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542K06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-141K01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-351M15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-416O08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-507L22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-418B13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-050F01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-096H07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-147B05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-177G10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-232N21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-232N23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-348L03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-395A20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-471G01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-518F13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-533B16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-538C12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-543C22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-152N19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-101L18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-511E20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-522M19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-139K21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-095E06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-232F02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-340K19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-353F22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-385P03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-432A03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-434A22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-440B04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-440B07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-462O20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-495F18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542L22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-053O24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-096C12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-122E02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-132O20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-313D10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-335F06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-340I13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-346F11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-362I14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-363G09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-383I18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-420K20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-422F05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-441N22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-450O21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-455D18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-466H09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-480E22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-507E22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-537N02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-537P06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-540B11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-521J05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-111D02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-373E17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-346F01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-365K14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-372L07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-337C16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-152F22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-434D17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-065I23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-124K18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-319E09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-120D01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-494F05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-484P08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-403M14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-072F07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-331J22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-494A02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-525O01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-533H08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-358M08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-388F10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-413H09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-504H23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-520E04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-403I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447B05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-302D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167O21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-296A19.b	B6Ng01-296A19.g
ACC	GA091758	GA091759
length	1,106	1,129
definition	B6Ng01-296A19.b	B6Ng01-296A19.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(4,576,022 - 4,577,133)	(4,421,497 - 4,422,622)
sequence	gaattctatctgagtaaattagagatccatgtatacaggaaatgttcaac gtgtgtgtgcaatgcatgacactattccctacattccaagctaaactgat aaaaatggaaaggtctacttagattaacatttattgttaagcacacagtc aataagtcttactttgtggatgtattgggattaaacagatatgttcagag ttttctttttcttggcattactggaggcagatacaagacatgaatcaata acttaggttttctattgctctgaagagacatcatgactatgctatcaatg ctaagtctcataaaagaaagcaattaataggggctggcttaccggttcag agggttagtccattctcatcatggtgggaagcatgctggaacacaggcac aggtgctggagaagtagtgagagttctacatccagattggtaggcagcag gaagaatgactgacactggtcctagctggagcatttgaaactacaaagac agtgacacacctactccaacaaggccacacctcctaattgtgcctttctc tgtgagcctataagggccattttcattcaaactaccccagccagtgaaaa gaattcttttctttctaacaactggccaccatacatctcttaaaatcttc tattgccttagagaagcagggctatctctggaacgctaatactcttatga cttttatctctgattgaattgcaacatagttcaacatgaagccatagttg tgtttcaaaggaaaatagaatgcattttacatgtttataactatttgaga tacagacacactaatcataaaggatggaggtcaaatatctcttttatagt tgtcaaaacacaaactggactacctgccttctgtaccttcttccacatgc agaggataactgtaaaccaccttgggaaaaaaaaattttaaaggtttatt gcatgcccaactcttctcaccttattaatggagaaaaaatattgacagat atgatttattgaaatatgaattttattggacatggcgatacaataatttt ggctagagaaatgattccacttggcacagctagttaatgataccatattc aaagcc	gaattctctgtttagctctgtaccccatttttaattgggttatttgcttt gttggagtctaacttcttgagttctttatatattttggagagccctctgt cagatatagggttggtgaagatctttccccattctgtagactgttgtttt gtcttattgatggtgggttttgccttacagaagcttttctgtttcatgag gtcacatttatcaattgttaatcttagagcctgagccactggtgttctgc ttaggagtttgtctcctgtaccaatgcattcaagacaattcccactttct tttctgttagatttagtgtatctggttttatgttgaggtctgtgatctac ttggacttgagttttgtgcagggtgataattatgtatctatttgcattct tctacatgcagacatccagttagactagcaccatttgttgaagatgtttt cttttttttcccattgtatggttttggcatctttattcgtttaaatatct tctgcttctttctaccttccctgtgagtctgagattccaattcacactcc tgttatgctgacctctgccttcagcattattatttttctcttctattcct cttaaactttatttctattgtttcttacaaggcttctgatttgccaatta ttcttaagcataagctattaaattcatccattttttccctttaatacttt ctagcttataattttaatttgatatttttctaattgatatataccttatt atgctgtagattccctgttgaatttctggcttgaaatttatttctttgta catataaatatttctgttttataatttagtatagcaatattttatggtca ttgtatatttgtttgttttttaatggttttatttattctttgaaaaattt tatgtacgtaccctgtttatgttcatcttcctattgcccccttctaactc tccttttgattcttccaacatattccatgttctgatgcatatatctgcca acttatagtataatatcccaaattatacagtcagaaaacctggaaaaata ataataaatggcctccacacaacagattagtagcataccattataccagg tgacttgagagagcttagctttgttgtgg
quality values	Open. Hide. 58 31 18 41 62 62 62 52 47 62 54 62 62 51 47 62 62 56 47 62 47 54 62 62 44 39 62 59 59 62 62 44 45 56 50 59 43 38 49 54 59 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 54 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 50 62 62 62 54 62 62 62 62 62 47 62 54 62 54 62 62 62 62 62 62 62 58 48 58 58 52 58 58 58 58 49 52 58 58 58 58 58 58 58 54 58 58 58 58 58 54 58 44 46 58 58 58 54 58 58 58 58 58 58 58 50 58 58 58 58 54 54 54 46 58 54 40 58 54 54 58 58 58 54 52 54 58 54 46 58 54 58 54 54 58 41 31 49 52 54 58 45 49 51 58 58 58 58 58 58 52 58 38 28 58 53 58 58 58 58 53 50 58 58 50 41 50 58 48 46 58 58 58 58 45 48 45 50 46 39 50 58 58 54 50 58 54 58 58 58 43 44 49 58 43 48 58 58 58 50 52 52 47 51 58 27 41 58 53 53 34 58 50 58 51 27 48 39 19 49 49 44 58 51 50 51 58 53 51 58 43 44 44 37 41 53 53 43 58 50 53 49 58 58 53 53 53 39 40 46 34 49 58 58 41 52 52 53 53 53 52 52 47 30 53 49 40 41 38 54 50 37 35 51 49 40 49 42 32 54 51 39 29 52 50 36 47 52 46 54 30 42 42 30 52 45 32 49 46 51 40 53 46 54 54 42 51 54 46 40 47 32 54 54 32 52 45 38 53 37 37 54 25 32 32 30 28 41 32 32 32 45 53 53 53 52 34 34 31 42 45 37 42 36 49 49 45 51 31 33 25 28 34 29 32 41 31 23 33 31 31 32 31 31 42 38 31 45 31 51 45 31 45 31 24 31 33 37 16 51 26 36 31 47 40 45 31 31 31 32 42 32 48 47 32 31 31 32 31 35 36 35 28 30 31 46 46 30 31 25 43 28 46 32 32 31 39 31 30 26 31 34 25 28 32 31 24 31 31 41 33 31 37 32 31 29 17 24 31 36 29 33 22 31 14 23 19 22 31 31 21 11 38 22 21 24 13 24 21 32 32 38 24 33 38 26 7 11 27 17 24 27 20 31 44 33 27 44 48 48 44 44 44 43 27 30 47 48 25 18 43 15 17 12 14 47 28 18 19 21 28 27 22 32 34 32 33 12 9 21 29 32 20 22 5 9 27 33 29 9 17 33 23 18 9 25 8 9 17 21 21 12 6 7 40 38 38 38 9 6 8 5 11 27 17 15 8 18 16 10 20 28 17 27 20 38 14 7 7 20 9 15 26 7 15 13 21 22 15 14 14 38 38 18 6 5 23 6 16 14 7 10 5 19 19 14 9 14 9 9 9 5 7 11 6 10 3 16 29 12 5 13 16 23 16 8 11 8 23 23 16 10 15 16 19 21 5 5 4 11 9 14 8 11 11 3 2 6 9 23 20 20 18 7 5 17 9 2 3 8 4 5 8 16 5 4 6 7 8 6 6 26 15 10 6 4	Open. Hide. 62 47 42 47 62 62 62 62 62 62 56 56 44 35 28 33 59 62 49 49 49 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 59 62 62 62 62 54 49 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 46 52 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 39 45 42 58 54 46 42 58 58 58 43 52 54 54 58 58 58 58 58 58 58 58 52 58 58 58 58 58 53 51 58 58 58 51 58 58 58 47 46 58 52 53 58 49 54 58 47 35 45 51 53 58 58 58 58 58 58 54 54 58 49 50 53 53 58 48 41 43 58 58 48 44 58 58 44 58 58 51 52 53 58 58 53 51 51 51 58 58 39 58 49 51 50 51 50 50 40 50 48 58 52 58 58 50 51 58 46 37 58 58 46 44 40 40 52 49 51 52 47 58 52 58 50 51 58 40 54 40 51 39 58 50 58 51 53 53 45 50 58 52 49 58 52 40 51 42 28 35 51 54 49 49 44 49 38 39 44 52 54 50 41 49 51 39 49 52 54 50 52 41 53 45 51 54 52 42 41 29 40 49 54 49 47 33 42 52 54 36 38 53 42 42 46 54 54 49 37 44 32 33 45 46 51 47 53 37 52 53 53 52 39 42 52 53 53 53 40 45 40 32 52 40 53 51 32 53 31 32 31 52 31 52 46 32 53 31 34 34 51 34 24 52 53 45 40 47 51 31 53 29 30 34 52 32 31 51 29 30 31 51 31 32 31 51 40 40 31 31 30 28 42 31 42 42 51 32 41 39 42 48 38 39 31 37 29 51 47 30 30 31 31 33 31 47 30 31 25 36 36 31 31 32 38 32 31 40 31 46 36 36 19 31 31 30 32 25 35 29 31 41 42 21 31 31 31 28 47 29 39 31 48 32 31 31 48 48 46 48 31 21 31 30 35 28 20 46 46 29 37 32 47 31 31 31 32 42 29 46 23 19 34 48 48 48 31 27 48 44 31 21 21 35 34 31 38 31 36 31 33 48 38 26 26 28 48 24 25 31 37 19 22 32 31 31 25 22 14 18 17 25 25 14 24 32 30 48 48 47 30 17 26 30 31 17 14 29 32 32 32 19 29 29 48 47 28 27 32 16 22 30 17 24 17 25 14 22 33 32 32 21 19 22 8 17 32 28 24 10 23 29 26 26 28 19 17 27 20 14 7 4 4 8 8 5 7 18 13 11 14 28 23 20 18 4 5 5 11 13 19 11 12 6 7 11 12 29 10 18 29 13 13 9 7 7 10 19 11 7 6 27 10 8 16 34 24 16 7 10 20 7 5 3 17 29 26 9 21 18 9 11 16 14 23 13 26 17 15 13 16 5 8 12 4 16 5 3 5 17 12 11 8 5 8 21 8 11 16 14 2 8 8 14 4 14 5 13 17 5 5 6 7 10 5 15 9 2 4 6 6 6 7 10 11 8 6 7 3 9 4 15 7 8 10 16 8 19 16 19 30 20 6 4 10 6 4 10 17

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_4576022_4577133
seq2: B6Ng01-296A19.b_46_1151 (reverse)

seq1  GGCTTTG-ATATGGTATTCAATTTACAAGCTGTGCCAAGTGAAATCATAT  49
      ||||||| |||||||||   ||| || |||||||||||||| |||||   
seq2  GGCTTTGAATATGGTAT--CATTAACTAGCTGTGCCAAGTGGAATCA---  45

seq1  TTTCTCTAGCCACAAATTA-TGTATCGCCATTGTCCAATAAAATTCATAT  98
      |||||||||||| |||||| |||||||||| |||||||||||||||||||
seq2  TTTCTCTAGCCA-AAATTATTGTATCGCCA-TGTCCAATAAAATTCATAT  93

seq1  TTCAATAAATCATATCTGTCAATA-TTTTTCTCCATTATCAAGGTTGAGA  147
      |||||||||||||||||||||||| |||||||||||||  |||| |||||
seq2  TTCAATAAATCATATCTGTCAATATTTTTTCTCCATTAATAAGG-TGAGA  142

seq1  AGAGTTGGGCATGCAATAAACCTTT--AAGTTTTTTTTCCCAAGGTGGTT  195
      |||||||||||||||||||||||||  || ||||||||||||||||||||
seq2  AGAGTTGGGCATGCAATAAACCTTTAAAATTTTTTTTTCCCAAGGTGGTT  192

seq1  TACAGTTATCCTCTGCATGTGGAAGAAGGTACAGAAGGCAGGTAGTCCAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TACAGTTATCCTCTGCATGTGGAAGAAGGTACAGAAGGCAGGTAGTCCAG  242

seq1  TTTGTGTTTTGACAACTATAAAAGAGATATTTGACCTCCATCTTTTATGA  295
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTGTGTTTTGACAACTATAAAAGAGATATTTGACCTCCATCCTTTATGA  292

seq1  TTAGTGTGTCTGTATCTCAAATAGTTATAAACAATTAAAATGCATTCTAT  345
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  TTAGTGTGTCTGTATCTCAAATAGTTATAAACATGTAAAATGCATTCTAT  342

seq1  TTTCCTTTGAAACGCAACTATGGCTTCATGTTGAACTATGTTGCAATTCA  395
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTGAAACACAACTATGGCTTCATGTTGAACTATGTTGCAATTCA  392

seq1  ATCAGAGTCATAAGAGTCATAAGAGTAATAGCGTTCCAGAGATAGCCCTG  445
      |||||||  |||| ||||||||||||| ||||||||||||||||||||||
seq2  ATCAGAG--ATAAAAGTCATAAGAGTATTAGCGTTCCAGAGATAGCCCTG  440

seq1  CTTCTCTAAGGCAATAGAAGATATTAAGAGATGTATGGTTGCCGGTTGTT  495
      |||||||||||||||||||||| |||||||||||||||| ||| ||||||
seq2  CTTCTCTAAGGCAATAGAAGATTTTAAGAGATGTATGGTGGCCAGTTGTT  490

seq1  AGAAAGAAAAGAATTCTTTGCACTGGCTGGGGTAGTTTGAATGAAAATGG  545
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGAAAGAAAAGAATTCTTTTCACTGGCTGGGGTAGTTTGAATGAAAATGG  540

seq1  CCCTTATAGGCTCACAGAGAAAGGCATAATTAGGAGGTGTGGCCTTGTTG  595
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCCTTATAGGCTCACAGAGAAAGGCACAATTAGGAGGTGTGGCCTTGTTG  590

seq1  GAGTAGGTGTGTCACTGGCTTTGAAGTTTCAAATGCTCCAGCTAGGACCA  645
      ||||||||||||||||| ||||| ||||||||||||||||||||||||||
seq2  GAGTAGGTGTGTCACTGTCTTTGTAGTTTCAAATGCTCCAGCTAGGACCA  640

seq1  GTGTCATTCATTCTTCCTGCTGCCTGCCAATCTGGATGTAGAACTCTCAC  695
      |||||| |||||||||||||||||| ||||||||||||||||||||||||
seq2  GTGTCAGTCATTCTTCCTGCTGCCTACCAATCTGGATGTAGAACTCTCAC  690

seq1  TACTTCTCCAGCACCTGTGCCTGTGTTCCAGCATGCTTCCCACCATGATG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTCCAGCACCTGTGCCTGTGTTCCAGCATGCTTCCCACCATGATG  740

seq1  AGAATGGACTAACCCTCTGAACCGGAAAGCCAGCCCCTATTAATTGCTTT  795
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGAATGGACTAACCCTCTGAACCGGTAAGCCAGCCCCTATTAATTGCTTT  790

seq1  CTTTTATGAGACTTAGCATTGAGAGCATAATAATGATGTCTCTTCAGAGC  845
      |||||||||||||||||||||| |||||| | ||||||||||||||||||
seq2  CTTTTATGAGACTTAGCATTGATAGCATAGTCATGATGTCTCTTCAGAGC  840

seq1  AATAGAAAAACCTAAGTTATTGATGCATGTCTTGTATCTGCCTCCAGTAA  895
      ||||| |||||||||||||||||| |||||||||||||||||||||||||
seq2  AATAG-AAAACCTAAGTTATTGATTCATGTCTTGTATCTGCCTCCAGTAA  889

seq1  TGCCAAGAAAAAGAAAACTCTGAACATATCTGTTTAATCCCAATACATCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGAAAAAGAAAACTCTGAACATATCTGTTTAATCCCAATACATCC  939

seq1  ACAAAGTAAGATTTATTGACTGTGTGCTTAACAATAAATGTTAGTCTAAA  995
      ||||||||||| ||||||||||||||||||||||||||||||| ||||| 
seq2  ACAAAGTAAGACTTATTGACTGTGTGCTTAACAATAAATGTTAATCTAAG  989

seq1  TAGACCTTTCCATTTTTATCAGTTTAGCTTGGAATGTAGGGAATAGTGTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCTTTCCATTTTTATCAGTTTAGCTTGGAATGTAGGGAATAGTGTC  1039

seq1  ATGCATTGCACACACACGTTGAACATTTCCTGTATATATGGATCTCTAAT  1095
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATGCATTGCACACACACGTTGAACATTTCCTGTATACATGGATCTCTAAT  1089

seq1  TTACTCAGATAGAATTC  1112
      |||||||||||||||||
seq2  TTACTCAGATAGAATTC  1106

seq1: chrX_4421497_4422622
seq2: B6Ng01-296A19.g_66_1194

seq1  GAATTCTCTGTTTAGCTCTGTACCCCATTTTTAATTGGGTTATTTGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTAGCTCTGTACCCCATTTTTAATTGGGTTATTTGCTTT  50

seq1  CTTGGAGTCTAACTTCTTGAGTTCTTTATATATTTTGGAGAGCCCTCTGT  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGTCTAACTTCTTGAGTTCTTTATATATTTTGGAGAGCCCTCTGT  100

seq1  CAGATATAGGGTTGGTGAAGATCTTTCCCCATTCTGTAGACTGTTGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATAGGGTTGGTGAAGATCTTTCCCCATTCTGTAGACTGTTGTTTT  150

seq1  GTCTTATTGATGGTGGGTTTTGCCTTACAGAAGCTTTTCTGTTTCATGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATTGATGGTGGGTTTTGCCTTACAGAAGCTTTTCTGTTTCATGAG  200

seq1  GTCACATTTATCAATTGTTAATCTTAGAGCCTGAGCCACTGGTGTTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATTTATCAATTGTTAATCTTAGAGCCTGAGCCACTGGTGTTCTGC  250

seq1  TTAGGAGTTTGTCTCCTGTACCAATGCATTCAAGACAATTCCCACTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGTTTGTCTCCTGTACCAATGCATTCAAGACAATTCCCACTTTCT  300

seq1  TTTCTGTTAGATTTAGTATATCTGGTTTTATGTTGAGGTCTGTGATCTAC  350
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTCTGTTAGATTTAGTGTATCTGGTTTTATGTTGAGGTCTGTGATCTAC  350

seq1  TTGGACTTGAGTTTTGTGCAGGGTGATAATTATGTATCTATTTGCATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTTGAGTTTTGTGCAGGGTGATAATTATGTATCTATTTGCATTCT  400

seq1  TCTACATGCAGACATCCAGTTAGACTAGCACCATTTGTTGAAGATGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATGCAGACATCCAGTTAGACTAGCACCATTTGTTGAAGATGTTTT  450

seq1  C-TTTTTTTCCCATTGTATGGTTTTGGCATCTTTATTCGTTTAAATATCT  499
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTCCCATTGTATGGTTTTGGCATCTTTATTCGTTTAAATATCT  500

seq1  TCTGCTTCTTTCTACCTTCCCTGTGAGTCTGAGATTCCAATTCACACTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCTTTCTACCTTCCCTGTGAGTCTGAGATTCCAATTCACACTCC  550

seq1  TGTTATGCTGACCTCTGCCTTCAGCATTATTATTTTTCTCTTCTATTCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGCTGACCTCTGCCTTCAGCATTATTATTTTTCTCTTCTATTCCT  600

seq1  CTTAAACTTTATTTCTATTGTTTCTTACAAGGCTTCTGATTTGCCAATTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACTTTATTTCTATTGTTTCTTACAAGGCTTCTGATTTGCCAATTA  650

seq1  TTCTTAAGCATAAGCTATTAAATTCATCCATTTTTTCCCTTTAATACTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAGCATAAGCTATTAAATTCATCCATTTTTTCCCTTTAATACTTT  700

seq1  CTAGCTTATAATTTTAATTTGATATTTTTCTAATTGATATATACCTTATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTTATAATTTTAATTTGATATTTTTCTAATTGATATATACCTTATT  750

seq1  ATGCTGTAGATTCCCTGTTGAATTTCTGGCTTGAAATTTATTTCTTTGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTAGATTCCCTGTTGAATTTCTGGCTTGAAATTTATTTCTTTGTA  800

seq1  CATATAAATATTTCTGTTTTATAATTTAGTATAGCAATATTTTATGGTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAATATTTCTGTTTTATAATTTAGTATAGCAATATTTTATGGTCA  850

seq1  TTGTATATTTGTTTGTTTTTTAATGGTTTTATTTATTCTTTGAAAAATTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATATTTGTTTGTTTTTTAATGGTTTTATTTATTCTTTGAAAAATTT  900

seq1  TATGTACGTACCCTGTTTATGTTCATCTTCCTATTGCCCCCTTCTAACTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACGTACCCTGTTTATGTTCATCTTCCTATTGCCCCCTTCTAACTC  950

seq1  TCCTTTTGATTCTTCCAACATATTCCATGTTCTGATGCATATATCTGCCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTGATTCTTCCAACATATTCCATGTTCTGATGCATATATCTGCCA  1000

seq1  ACTTATAAGTATAATAT-CCAAATTATACAGTCAGAAA--CTGGGAAAAT  1046
      |||||| |||||||||| ||||||||||||||||||||  |||| |||||
seq2  ACTTAT-AGTATAATATCCCAAATTATACAGTCAGAAAACCTGGAAAAAT  1049

seq1  AATAATAAATGGC--TCACACAACAGATTAAGGTAAGCATACCA-TATAC  1093
      |||||||||||||   ||||||||||||||  || ||||||||| |||||
seq2  AATAATAAATGGCCTCCACACAACAGATTA--GT-AGCATACCATTATAC  1096

seq1  CAAGTGACTTGAAGAGAAGCTAGCTTTG-TGTGG  1126
      || |||||||| |||||   |||||||| |||||
seq2  CAGGTGACTTG-AGAGAGCTTAGCTTTGTTGTGG  1129

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Alignment Information