BAC Information

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BAC

Clone NameB6Ng01-298N01
ChromosomeX (Build37)
Map Location 135,598,395 - 135,599,510
singlet/doubletsinglet
Overlap genenone
Upstream geneIl1rapl2, 1700025D03Rik, Nrk
Downstream geneSerpina7, 4930513O06Rik, 4933428M09Rik, Mum1l1, LOC675062, Trap1a, C330013F16Rik, EG666359, D330045A20Rik, Rnf128, LOC622432, Tbc1d8b, Ripply1, Cldn2, Morc4, Rbm41, Gm719, E230019M04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298N01.bB6Ng01-298N01.g
ACCGA093827GA093828
length1,1191,192
definitionB6Ng01-298N01.b B6Ng01-298N01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaaattcacccatttcttttaggttttgaagcttaaagtgttc
ggaagtttgagggagctgtcattaaatctgcaaattggttttggtagtat
gtcatatagtatttttttttacatttttttgtttgagagatgtattactc
agggttctgttgataaaaagaactgataaaattcatatatatttcaagag
gatttattagattggcttacatgacagggatttggtaatcctacaatggc
catcatcggcatcctggagaatctgagaacccaagagcttctcagtccac
aaggctacgtgcctcagcagcacaatctagcaaggaaggcctggcagaga
cctggagagccttaagtgctctgtgtacattggaagtctaaagaagatga
attctaataagagcaagtaatagtaacagcagtagcggccaagcagatgt
tcttatcagcagtcaggctcaaacaatacacatttactcagaacttcctc
cattctttatataatcactcaaagtttcctcagttccccacagtgaacaa
taacaaaaataaacagcttattcctctcgtcaccttatatctgggtctcc
atagtctacactcgcagaagctcttctcagttaatcttttcaggaaatat
tcctatgaaccttaccaagacgtaggcatcttaattgaatccagatgcaa
ctggatttcttgatagattgctagacaatcaacattaaccatcacaataa
aatcttgttatttatttttcttgaaattaaaatataattacatcctatcc
ctcttttctttcccctacttccaagccttcccataaccttggaccttgac
cttgggccttggaggagaacttacagccaccacaaaataagtttaaccat
catagtacaatttaaaatgcatttttctatcaatttacaagtatatagta
taatattttgattctgtgattcttatgcaatagtctccagaagtgcttat
tatgtaacttttgtgagttattaaactctagtgccatatttatttttagt
cttttatcttcatcagcatcactacttttgagacttagtatggtgttttt
tgcattgttatattctgtt
gaattccagtactatcatgggctagggactaagccttcagcatatgagtc
tttttttctcctgctcataatatctttttattgttttccgtctacttaac
atcaaaacaagaacaaatattcatgactttgctgtctccaaagaaagcag
aaaaggggagtataatgaactaaaggaaccagctcagcttttaatgaaat
tctgcactgttttttaattggatattttatttatttacatttcaaatgtt
acccccttcccagtttcccctccacaagcctccatcccattccccttcct
tctgcctctgagggtgctcccccacacacctactcagtcttgcctcagct
gcctagtgttcccctatcctgggtcatcaaacctccacaggaacatgggc
tacccctcccagtgatgccagataaggccatcctctgctacaataacccc
tgtgtactctttggttggtggtttagtccctgggatctttgagggctctg
tttgctcttcctatgaggttgcaaaccccttcagctcctacagtccttgc
cctaacttccccattggggtctccatgctcagtccaatatttggctgtgt
acatacacatttgtattagtcaggaattagcaaagcctctcagggaacag
ttataccaggctcctgtcagtaagcacttcttgacatcagcaatagtatg
tgggtttggtgtcagcagatgagattgatccccaggtggggaagtctctg
gacagcctttccttcaatttctgctccactcttctggaacactcctccat
tgctggtaggattgcaagctggtacaactactctgggaaatcagtttggg
cggttcctcaggaaactggaaatagttctacctgagaacccagctatacc
actcctggtcatatatccaaaagatactccaacatataacaaggacaaca
tgctctgctattgttcataagaagctatttataataagacaaaagctgga
aagaacctcatatggtccctcacagaggatgaatacgaacatgtggtaca
tttacactatgggagtactacctcagctataaaaaaccatccactcagga
atctaagcaaatgggaatggaaccttgaaaattcaactgaataagctaac
ccagtttcacaaaggaaccacaccatgtaatagttggcaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_135598395_135599510
seq2: B6Ng01-298N01.b_47_1165

seq1  GAATTCAGAAATTCACCCATTTCTTTTAGGTTTTGAAGCTTAAAGTGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAATTCACCCATTTCTTTTAGGTTTTGAAGCTTAAAGTGTTC  50

seq1  GGAAGTTTGAGGGAGCTGTCATTAAATCTGCAAATTGGTTTTGGTAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTTGAGGGAGCTGTCATTAAATCTGCAAATTGGTTTTGGTAGTAT  100

seq1  GTCATATAGTATTTTTTTTTACATTTTTTTGTTTGAGAGATGTATTACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATAGTATTTTTTTTTACATTTTTTTGTTTGAGAGATGTATTACTC  150

seq1  AGGGTTCTGTTGATAAAAAGAACTGATAAAATTCATATATATTTCAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTCTGTTGATAAAAAGAACTGATAAAATTCATATATATTTCAAGAG  200

seq1  GATTTATTAGATTGGCTTACATGACAGGGATTTGGTAATCCTACAATGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTAGATTGGCTTACATGACAGGGATTTGGTAATCCTACAATGGC  250

seq1  CATCATCGGCATCCTGGAGAATCTGAGAACCCAAGAGCTTCTCAGTCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCGGCATCCTGGAGAATCTGAGAACCCAAGAGCTTCTCAGTCCAC  300

seq1  AAGGCTACGTGCCTCAGCAGCACAATCTAGCAAGGAAGGCCTGGCAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTACGTGCCTCAGCAGCACAATCTAGCAAGGAAGGCCTGGCAGAGA  350

seq1  CCTGGAGAGCCTTAAGTGCTCTGTGTACATTGGAAGTCTAAAGAAGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGAGCCTTAAGTGCTCTGTGTACATTGGAAGTCTAAAGAAGATGA  400

seq1  ATTCTAATAAGAGCAAGTAATAGTAACAGCAGTAGCGGCCAAGCAGATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAATAAGAGCAAGTAATAGTAACAGCAGTAGCGGCCAAGCAGATGT  450

seq1  TCTTATCAGCAGTCAGGCTCAAACAATACACATTTACTCAGAACTTCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCAGCAGTCAGGCTCAAACAATACACATTTACTCAGAACTTCCTC  500

seq1  CATTCTTTATATAATCACTCAAAGTTTCCTCAGTTCCCCACAGTGAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTATATAATCACTCAAAGTTTCCTCAGTTCCCCACAGTGAACAA  550

seq1  TAACAAAAATAAACAGCTTATTCCTCTCGTCACCTTATATCTGGGTCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAAATAAACAGCTTATTCCTCTCGTCACCTTATATCTGGGTCTCC  600

seq1  ATAGTCTACACTCGCAGAAGCTCTTCTCAGTTAATCTTTTCAGGAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTACACTCGCAGAAGCTCTTCTCAGTTAATCTTTTCAGGAAATAT  650

seq1  TCCTATGAACCTTACCAAGACGTAGGCATCTTAATTGAATCCAGATGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGAACCTTACCAAGACGTAGGCATCTTAATTGAATCCAGATGCAA  700

seq1  CTGGATTTCTTGATAGATTGCTAGACAATCAACATTAACCATCACAATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTTCTTGATAGATTGCTAGACAATCAACATTAACCATCACAATAA  750

seq1  AATCTTGTTATTTATTTTTCTTGAAATTAAAATATAATTACATCCTATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGTTATTTATTTTTCTTGAAATTAAAATATAATTACATCCTATCC  800

seq1  CTCTTTTCTTTCCCCTACTTCCAAGCCTTCCCATAACCTTGGACCTTGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCTTTCCCCTACTTCCAAGCCTTCCCATAACCTTGGACCTTGAC  850

seq1  CTT-GGCCTTGGAGGAGAACTTACAGCCACCACAAAATAAGTTTAACCAT  899
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCCTTGGAGGAGAACTTACAGCCACCACAAAATAAGTTTAACCAT  900

seq1  CATAGTACAATTTAAAATGCATTTTTCTATCAATTTACAAGTATATAGTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTACAATTTAAAATGCATTTTTCTATCAATTTACAAGTATATAGTA  950

seq1  TAATATTTTGATTCTGTGATTC-TATGCAATAGGTCTCCAGAAGTGCTTA  998
      |||||||||||||||||||||| ||||||||| |||||||||||||||||
seq2  TAATATTTTGATTCTGTGATTCTTATGCAATA-GTCTCCAGAAGTGCTTA  999

seq1  -TATGTAAC-TTTGTGAGTTATTAAAACTCTAGTGCCATATTTATTTTTA  1046
       |||||||| ||||||||||||| ||||||||||||||||||||||||||
seq2  TTATGTAACTTTTGTGAGTTATT-AAACTCTAGTGCCATATTTATTTTTA  1048

seq1  GTC-TTTATCTTCATCAGGCATCACTACTTTTGAAGACTTAGTAT-GTG-  1093
      ||| ||||||||||||| ||||||||||||||| ||||||||||| ||| 
seq2  GTCTTTTATCTTCATCA-GCATCACTACTTTTG-AGACTTAGTATGGTGT  1096

seq1  TTTTTGTA-TGTTATATTCCTGTT  1116
      |||||| | ||||||||| |||||
seq2  TTTTTGCATTGTTATATT-CTGTT  1119