BAC Information

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BAC

Clone NameB6Ng01-302B15
ChromosomeX (Build37)
Map Location 41,006,421 - 41,007,520
singlet/doubletsinglet
Overlap genenone
Upstream geneOdz1, Gm362, LOC100039977
Downstream geneLOC100039987, LOC637141, Wdr40c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302B15.bB6Ng01-302B15.g
ACCGA096241GA096242
length1,1971,105
definitionB6Ng01-302B15.b B6Ng01-302B15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaataaataaatgaaagtccaatagtacaaaatatgctcaaaa
aagcaaactgaaacaaaagtctacaaaaattcctttgagtttgttttgtg
ttgactaactattctgggcatggagcctgcttaaaaatgtgattaacata
cccagtgagactccactgaagaaaatttctttttctctttgccagtatat
attaaatgcagatagcttcttggtcggggtaatcctatgtctacttcctc
cttttgtgctagggaccctgtgtgacctgaagctgcgcaagatttctgca
tgaaaccacaatctttgtgagtacatatgggtatcagttctattgtatct
ggaacacactgtttccttggaatccttcatctcctctggttcatattatc
tttctaattcctcttccacattgatctgtgaacattgaggggagggcttt
aatgaagatatcacatatagaaatgaatgcttcaacatctctctctgcac
cttgttcagttgtaattctctgtgttagttcttatctgcaggaagaagaa
tcctctgtaatgaaggtcaaacaagtcactgaactatgtgcatatatata
tatcactaagagtcattttattgctatgtccctttagcagaatagtacta
gagttttcatagaccatgactgatctagtcctatatacttgaccacttta
accattttaggtatggattccttatcatggagtaggccttaaatccaagc
agaaagtgattatttactcccatgtttgtgtcaatactgaaccagtatat
cttgatggcagctcactgatgtaggttgcatggtttgtaggagggagata
ttgaagattacttctttagtacagagtactttccagtaccctgaacacta
gtcagtgggatggagcttttagttcaacactacttgactttctgtgttca
acaaagtgttatcctcagcaatatggccttacagtctggttaaaggatag
taaccattagccttgtgtcttacttaggattaatatgactataatgaaca
ctatacccaaaagcattgttgaggaggaagtggcttactctacttatatc
aacatcatcattcacattgaaggaaggtcatgcagtaacttaacagagtc
agaaattctgtggagggaagggaggatatggatatatataagagcgc

gaattccacgaacttaactgcactgaagacactaactgaaaggaactgaa
tggaactgcacaacctcaactgaattcaactacattcaacagaactgaac
caaactgtaatgaactgatttgcactcaccgatctacccttcctttctga
ctcactctgtgctgctctttagtagtctctctttcctgtctgttctcata
atatttttctctgattcatcaatttgtctaccactcaattagatatcaat
ttcagacatgggtgcttccttctacaaactaattttaatttctccatttg
gaatttaaggtgtgtactaagggcacatatgtgttcaaggcagagagatt
aatggagtgtgcaaaggaatgagacacacaacaactagaaataggttttc
ccagtgaacaacacaaccttttggtccacagtgtgatcaaatatcctgca
acaagaatgtgttctgtattctatttttggtataaaataattagtcaggc
atgttacaaaaacaagagatagggtttctataatacagtcccattcatta
aacatactttgatcacaaggtattagaaacattaaccttatctcttgcat
tccattgaaataagcctataatgaatatttactggaatgtggatcagggc
ttggcaatctgattcagcaaaaaaacatacaggaagtagttttaatttat
caaggtttagcctccatggtatcttctcaacgttaccactgttgcatgaa
aagagatataaataattatatatgaatgaatatggctgtatttcaagcat
taatacttttcaataagactgggtctttatatatacctcaggctacattt
aatttaactcagtatttacctaaggctaacccggaactcctcttgctcct
gcagtgagttggcatgattggtatatatctccaggagtacatttttttgt
tttgtttgtttttgaggcagcatattacaaggtagtctggtactcttatt
ttaagcaagaatgggctgagcatggatttgatccttttcacttctcttcc
tctcaggtactgaaaattacgtttttgtcctaccttgtcttttacaaaaa
tatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_41006421_41007520
seq2: B6Ng01-302B15.g_66_1170

seq1  GAATTCCACGAACTTAACTGCACTGAAGACACTAACTGAAAGGAACTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGAACTTAACTGCACTGAAGACACTAACTGAAAGGAACTGAA  50

seq1  TGGAACTGCACAACCTCAACTGAATTCAACTACATTCAACAGAACTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTGCACAACCTCAACTGAATTCAACTACATTCAACAGAACTGAAC  100

seq1  CAAACTGTAATGAACTGATTTGCACTCACCGATCTACCCTTCCTTTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGTAATGAACTGATTTGCACTCACCGATCTACCCTTCCTTTCTGA  150

seq1  CTCACTCTGTGCTGCTCTTTAGTAGTCTCTCTTTCCTGTCTGTTCTCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCTGTGCTGCTCTTTAGTAGTCTCTCTTTCCTGTCTGTTCTCATA  200

seq1  ATATTTTTCTCTGATTCATCAATTTGTCTACCACTCAATTAGATATCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTCTCTGATTCATCAATTTGTCTACCACTCAATTAGATATCAAT  250

seq1  TTCAGACATGGGTGCTTCCTTCTACAAACTAATTTTAATTTCTCCATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACATGGGTGCTTCCTTCTACAAACTAATTTTAATTTCTCCATTTG  300

seq1  GAATTTAAGGTGTGTACTAAGGGCACATATGTGTTCAAGGCAGAGAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAAGGTGTGTACTAAGGGCACATATGTGTTCAAGGCAGAGAGATT  350

seq1  AATGGAGTGTGCAAAGGAATGAGACACACAACAACTAGAAATAGGTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGTGTGCAAAGGAATGAGACACACAACAACTAGAAATAGGTTTTC  400

seq1  CCAGTGAACAACACAACCTTTTGGTCCACAGTGTGATCAAATATCCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAACAACACAACCTTTTGGTCCACAGTGTGATCAAATATCCTGCA  450

seq1  ACAAGAATGTGTTCTGTATTCTATTTTTGGTATAAAATAATTAGTCAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAATGTGTTCTGTATTCTATTTTTGGTATAAAATAATTAGTCAGGC  500

seq1  ATGTTACAAAAACAAGAGATAGGGTTTCTATAATACAGTCCCATTCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACAAAAACAAGAGATAGGGTTTCTATAATACAGTCCCATTCATTA  550

seq1  AACATACTTTGATCACAAGGTATTAGAAACATTAACCTTATCTCTTGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACTTTGATCACAAGGTATTAGAAACATTAACCTTATCTCTTGCAT  600

seq1  TCCATTGAAATAAGCCTATAATGAATATTTACTGGAATGTGGATCAGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGAAATAAGCCTATAATGAATATTTACTGGAATGTGGATCAGGGC  650

seq1  TTGGCAATCTGATTCAGCAAAAAAACATACAGGAAGTAGTTTTAATTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAATCTGATTCAGCAAAAAAACATACAGGAAGTAGTTTTAATTTAT  700

seq1  CAAGGTTTAGCCTCCATGGTATCTTCTCAACGTTACCACTGTTGCATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTTAGCCTCCATGGTATCTTCTCAACGTTACCACTGTTGCATGAA  750

seq1  AAGAGATATAAATAATTATATATGAATGAATATGGCTGTATTTCAAGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATATAAATAATTATATATGAATGAATATGGCTGTATTTCAAGCAT  800

seq1  TAATACTTTTCAATAAGACTGGGTCTTTATATATACCTCAGGCTACATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTTTTCAATAAGACTGGGTCTTTATATATACCTCAGGCTACATTT  850

seq1  AATTTAACTCAGTATTTACCTAAGGCTAACCCGGAACTCCTCTTGCTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAACTCAGTATTTACCTAAGGCTAACCCGGAACTCCTCTTGCTCCT  900

seq1  GCAGTGAGTTGGCATGATTGGTATATATCTCCAGGAGTACA-TTTTTTGT  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCAGTGAGTTGGCATGATTGGTATATATCTCCAGGAGTACATTTTTTTGT  950

seq1  TTTGTTTTGTTTTTGAGGCAGCATATTACAAGGTAGTCTGGTACTCTTAA  999
      |||| |||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTG-TTTGTTTTTGAGGCAGCATATTACAAGGTAGTCTGGTACTCTTAT  999

seq1  TTTAAGCAAGAATGGGCTTGAGCAT-GAATTGATCC-TTTCACTTCTCT-  1046
      ||||||||||||||||| ||||||| || ||||||| |||||||||||| 
seq2  TTTAAGCAAGAATGGGC-TGAGCATGGATTTGATCCTTTTCACTTCTCTT  1048

seq1  -CTCTCAAGTACTG-AGATTACG-TTTTGTCCTACCCTGTCTTTTACAAA  1093
       |||||| |||||| | |||||| |||||||||||| |||||||||||||
seq2  CCTCTCAGGTACTGAAAATTACGTTTTTGTCCTACCTTGTCTTTTACAAA  1098

seq1  ATTATTA  1100
      | |||||
seq2  AATATTA  1105


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