MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-302P21
Chromosome	X (Build37)
Map Location	119,533,063 - 119,534,167
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG245575, LOC100039544, Nap1l3
Downstream gene	3110007F17Rik, LOC100039751, LOC100039763
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG245575 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245575 MGI:3647043
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins

name	LOC100039544 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039544
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 8 Proteins pseudo : _no_value

name	Nap1l3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54561 MGI:1859565
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110007F17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73061 MGI:1920311
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039751 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 160 ESTs, 5 Proteins pseudo : _no_value

name	LOC100039763 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein

name	EG245575 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272153 GeneID:245575 MGI:3647043
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins product : predicted gene, EG245575 transcript_id : XM_142100.7

name	Nap1l3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20270268 GeneID:54561 MGI:1859565
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleosome assembly protein 1-like 3 transcript_id : NM_138742.1

name	3110007F17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625949 GeneID:73061 MGI:1920311
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110007F17 gene transcript_id : NM_028426.1

name	LOC100039763 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272163 GeneID:100039763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein product : similar to RIKEN cDNA 3110007F17 gene transcript_id : XM_001473145.1

name	EG245575 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272154 GeneID:245575 MGI:3647043
definition	codon_start : 1 product : similar to RIKEN cDNA 9230105E10 gene protein_id : XP_142100.7

name	Nap1l3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20270269 CCDS:CCDS30372.1 GeneID:54561 MGI:1859565
definition	codon_start : 1 product : nucleosome assembly protein 1-like 3 protein_id : NP_620081.1

name	3110007F17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625950 GeneID:73061 MGI:1920311
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence IEA] GO_function : GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC73061 protein_id : NP_082702.1

name	LOC100039763 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272164 GeneID:100039763
definition	codon_start : 1 product : similar to RIKEN cDNA 3110007F17 gene protein_id : XP_001473195.1

name	LOC100039544 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272157 GeneID:100039544
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 8 Proteins product : similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 pseudo : _no_value transcript_id : XR_031017.1

name	LOC100039751 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272162 GeneID:100039751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 160 ESTs, 5 Proteins product : similar to 40S ribosomal protein S12 pseudo : _no_value transcript_id : XR_031048.1

clone name	MSMg01-480C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074L03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-343O10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-442H14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-371G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361N19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-368K24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-366H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-472B08
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-123M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289M06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-302P21.b	B6Ng01-302P21.g
ACC	GA096902	GA096903
length	1,184	1,119
definition	B6Ng01-302P21.b	B6Ng01-302P21.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccaagctcactgttggcttcaaggattatctaggaaccattggaa cactggtggaggcttagctatatgtcaaaaatcaattcttaaaggcactt ataataaaacaatactgaaagagagcacaggtatccaaacaccagactaa tgaggggacagggtttgcctatatacaggctatgggaatgccaaggttcc aggaggcatagtttccttgaaactctttgcctcatgagtgcttccaggcc ttttggcctgtcaagcagacttcactggagtggatgtagtacctaaggac ttaccaaagcattttcctttcatttggcaaggccataattacacttatat acttttaccacagcaatttattaactttatatccctgtgccatagtttag aaaatggactgtttctgccaggatacaccacaagcatttcattgaactta gagatcagacttgtgcctggcctctttgtgtttatgaagcctttcagaca gtggctctaaacctttctaacattgacatactttactatagatcctcatg tgatccccaaacataaagtcatttttattgatgatctataactgtaattt tgatactgttatgaataataatgtaaatatatttctggatattgaggttt tccataggggttgtagcccacaggttgagaaaagtcactttaagctaaga ctagaaaaaaaaaaataacagtggcagcagtggcgattgatcctgattac caagtggaaattgtgttacttttccataatgtaggtaggaaagagtatgt tttgatttcaggaggtcctttaagcatgttttgatgcaacagtgtcattt gaaaatgagctactacaacaacactattagaccagattacaaaagaaaca taccctaaaaggatgcagttatgagtcattcctcaaggaaaagtaccaac ctgatgaggtgcttactgagtgtgaaggaaatatagacacttagtagagg aggtagttccaaatacagctaagaacacatgatcagttgcaaaagaagat tctatcgcaataatatttgcatgtattttgtaagaatgttgtttgttaca gatatacctaattcattggttcttataggattataacataattaaggttc catggttattgtgtttgaacttttagagatcaaa	gaattctggaggacaagtgtcagggaaggcaaatatttcttgaggtgcaa gttcaaatattgtggagcacacagaagtgaatggaactggaaattttgag agtaaggggattttcacagaaggctatttaggaggtactaatgggtgtga tcacatatttgagcaagggtcttcaagggatgagtgcttcagaagtgagg gtggcagtgttatcactgttgaggactgattagtgttattttctgtagac agaccaattcatttaatttaactactactattattaagatttttttatac ttgaaaatgattccttttgttttttgtattagaccttaaaatttatagta ctagctttagaaataatttctagaccatgtgttttatttatactgtcaga cacaccagaagagggtatccgatcccattacagatggttgtgagccacca tgtggttgctggaaattaaactcaggaactctggatgagctgttagtgtt cttaaatgctgagccatctctccagctcagtccatgtgttttactattaa ctcttattattttctaattttatcctgtctcaaaatagacagtcaactgt acttcaactttatctagttaacccttgatttttgtatcttctcatatcaa taacactgataactacaatttaaatatggtagtatttacatatttgtatg attgctttttgttgttccttgtgcttttatttattgtttcttataaatta tattgtcagctattcctaaaacaactttcaagtttgttttgcttctgtac tttcaaagcaaccactatattagtgagtatatagttagtaattatactat ttatattagcatttagtgttgatttaattatttacattattgtactgagt actcagtatcatgaatgcatgccttttttatatgagcttaaagctagagt gagtgcaatgaaagaaatactgagtaaatgacatcttatcatgtcactca tgcttataaatcctcactacaaaaagtttacatttacatggagtggctaa aataaggattaatcatttcaaaacttattaatggtcgtcttattgattag tgaatggaagaaaaggtaa
quality values	Open. Hide. 58 26 19 32 58 58 24 16 54 58 58 62 47 33 47 62 62 62 62 62 47 62 62 62 47 28 62 62 62 21 22 51 42 39 32 22 29 21 38 28 50 59 62 59 62 62 62 62 59 62 62 59 59 62 59 62 59 59 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 59 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 54 54 47 58 58 58 58 54 58 58 58 58 58 58 58 49 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 54 58 54 58 58 58 58 58 58 58 58 58 53 58 58 58 53 58 58 58 58 58 58 58 58 58 58 42 49 58 58 49 54 52 58 58 58 51 58 52 58 58 58 58 54 50 58 58 58 58 51 58 53 58 58 51 39 58 58 38 58 58 54 53 51 58 51 58 58 51 58 50 49 58 58 58 58 49 37 49 58 58 58 52 51 47 46 52 58 50 50 53 58 53 58 51 47 49 50 58 58 51 52 53 52 50 54 58 51 54 54 58 58 47 39 42 47 58 58 53 39 39 37 58 58 53 50 43 34 53 51 32 54 54 49 42 53 54 32 51 40 44 28 33 37 52 52 35 54 49 49 51 54 34 54 54 54 52 40 45 42 29 38 54 54 47 31 50 32 51 52 38 52 32 46 26 45 45 40 53 54 49 54 54 54 54 54 54 54 37 33 37 38 41 33 40 37 54 44 37 45 32 52 40 37 32 51 40 37 24 35 18 32 45 31 32 29 41 30 47 31 20 41 31 41 31 31 35 42 35 47 30 41 52 32 32 52 53 35 37 32 42 31 32 40 52 49 31 31 32 22 31 24 31 31 51 32 45 26 41 29 38 29 42 42 51 30 26 37 27 31 30 30 45 30 51 51 30 32 31 22 47 31 34 22 25 45 42 24 42 26 30 42 32 47 23 21 42 31 37 32 32 42 22 48 48 33 31 31 31 30 31 26 18 31 30 26 26 43 31 36 21 30 47 46 31 42 48 48 33 30 29 39 24 37 37 31 31 37 32 38 14 18 36 19 13 18 9 29 31 31 38 35 30 29 38 30 32 29 27 28 30 41 23 21 12 47 47 36 32 36 33 14 11 13 38 21 12 28 31 30 30 41 44 33 17 22 16 13 31 32 31 31 48 22 19 22 28 44 19 31 35 31 36 34 20 18 19 22 17 12 7 10 35 43 43 26 20 24 23 12 16 28 10 4 5 21 32 30 23 29 22 26 6 8 30 18 27 22 15 17 25 32 25 16 22 30 19 22 21 25 19 11 30 43 21 32 17 19 8 10 9 4 16 31 19 22 28 24 17 26 13 3 5 5 24 10 27 22 28 20 12 14 10 15 18 40 11 28 6 11 5 11 28 21 22 8 6 5 13 6 4 4 8 21 18 23 27 27 26 24 28 21 18 28 24 34 34 9 13 4 20 10 26 17 13 27 9 24 7 6 11 5 16 17 21 16 19 12 11 19 18 18 10 17 14 7 18 4 7 6 10 26 10 3 3 4 3 6 7 17 10 13 8 8 6 9 22 11 15 8 6 5 6 4 6 23 5 6 9 3 7 9 5 18 6 12 5 2 3 5 18 6 11 12 6 22 18 20 5 5 4 3 3 1 2 7 6 4 10 7 8 5 6 16 17 7 3 6 10 4 2 10 13 6 4 23 5 22 15 13 3 4 5 12 14 3 6 9 25 5 6 13 6 7 13 17 22 4 5 9 4 9 7 8 5 4 3 3	Open. Hide. 62 47 37 44 62 62 62 62 62 59 47 45 21 34 22 21 22 28 38 28 28 24 46 62 59 59 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 59 56 38 43 49 50 59 62 59 59 62 62 62 62 54 54 54 59 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 34 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 49 40 45 58 54 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 45 53 58 58 49 58 58 58 58 58 58 54 58 58 54 58 54 58 58 54 58 54 58 58 58 58 58 58 54 58 58 54 58 58 58 58 58 48 58 52 54 58 58 58 53 52 51 58 54 51 58 58 58 58 58 58 58 58 48 58 58 51 58 49 48 58 58 58 58 58 54 58 49 58 53 41 58 58 58 58 53 53 58 49 58 58 49 51 50 58 58 58 58 49 58 54 51 50 58 58 46 49 58 51 58 54 47 58 51 53 50 58 49 58 58 51 50 58 58 58 51 50 49 58 58 58 58 49 51 54 51 58 58 51 51 51 43 35 41 41 58 58 58 37 50 58 58 58 58 58 50 50 51 53 58 49 53 52 50 41 53 53 52 49 37 42 52 40 50 52 52 54 49 54 38 39 47 49 40 41 41 54 30 49 44 54 49 40 54 44 50 49 49 54 54 29 53 52 37 53 50 54 44 39 51 31 53 53 49 54 54 54 40 42 40 47 46 32 54 53 45 34 49 54 54 54 54 33 32 54 37 51 38 54 31 47 54 45 53 45 37 54 54 37 41 28 52 34 45 37 35 53 34 53 53 53 32 31 53 31 52 53 31 53 45 34 45 31 45 37 51 30 32 40 32 40 47 31 52 45 31 52 42 42 49 43 33 31 28 24 22 36 34 30 32 21 30 45 43 51 42 42 31 51 47 33 27 23 33 31 31 31 45 31 33 31 30 47 45 31 23 51 32 38 43 29 21 22 15 17 31 32 36 42 30 35 18 28 31 31 31 37 32 37 31 31 31 31 28 31 33 33 27 30 26 27 30 25 21 30 31 32 43 34 30 30 47 31 31 30 23 16 36 35 32 36 30 31 47 38 32 30 31 33 20 31 28 27 26 48 41 33 31 22 39 32 31 48 37 20 37 27 31 32 23 16 15 36 20 25 31 32 37 31 24 25 20 27 31 32 33 27 29 29 29 31 21 27 31 26 33 30 32 33 28 34 28 18 17 25 44 48 48 44 7 20 23 14 22 32 37 32 34 22 25 16 32 24 10 29 33 25 28 23 20 19 30 30 18 18 30 20 14 16 23 18 24 43 18 15 32 48 22 19 22 33 32 32 32 25 28 29 43 25 16 18 21 24 22 32 20 29 15 11 13 18 11 18 23 19 18 16 18 13 22 16 13 23 28 25 9 20 19 9 40 24 7 8 6 11 7 6 10 24 6 5 4 34 34 34 19 24 13 30 11 14 27 20 16 29 11 17 16 16 22 17 11 28 6 6 7 4 3 3 7 32 40 7 13 20 14 7 5 9 8 5 5 5 18 14 13 8 21 11 20 16 26 28 19 11 9 7 10 5 9 8 11 4 10 10 13 21 5 4 7 8 5 6 5 9 6 8 8 5 3 4 3 3 7 11 6 6 4 18 16 7 19 14 17 16 10 23 4 3 5

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_119533063_119534167
seq2: B6Ng01-302P21.g_65_1183 (reverse)

seq1  TTACCTTTTCTT-CATTCACTTAATCA--TAGACGA-CATTA--TAGTTT  44
      |||||||||||| ||||||| ||||||   |||||| |||||   |||||
seq2  TTACCTTTTCTTCCATTCAC-TAATCAATAAGACGACCATTAATAAGTTT  49

seq1  TG-AATGA-TAAT-CTTATTTTAACCACT-CATGT-AATGTAA--CTTTT  87
      || ||||| |||| ||||||||| ||||| ||||| |||||||   ||||
seq2  TGAAATGATTAATCCTTATTTTAGCCACTCCATGTAAATGTAAACTTTTT  99

seq1  GTAGTGA-GATTTATAAGCATGAGTGACATGATAAGATGTCATTTACTCA  136
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGAGGATTTATAAGCATGAGTGACATGATAAGATGTCATTTACTCA  149

seq1  GTATTTCTTTCATTGCACTCACTCTAGCTTTAAGCTCATAT-AAAAAGGC  185
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTATTTCTTTCATTGCACTCACTCTAGCTTTAAGCTCATATAAAAAAGGC  199

seq1  ATGCATTCATGATACTGAGTACTCAGTACAATAATGTAAATAATTAAATC  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTCATGATACTGAGTACTCAGTACAATAATGTAAATAATTAAATC  249

seq1  AACACTAAATGCTAATATAAATAGTATAATTACTAACTATATACTCACTA  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTAAATGCTAATATAAATAGTATAATTACTAACTATATACTCACTA  299

seq1  ATATAGTGGTTGCTTTGAAAGTACAGAAGCAAAACAAACTTGAAAGTTGT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTGGTTGCTTTGAAAGTACAGAAGCAAAACAAACTTGAAAGTTGT  349

seq1  TTTAGGAATAGCTGACAATATAATTTATAAGAAACAATAAATAAAAGCAC  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAATAGCTGACAATATAATTTATAAGAAACAATAAATAAAAGCAC  399

seq1  AAGGAACAACAAAAAGCAATCATACAAATATGTAAATACTACCATATTTA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACAACAAAAAGCAATCATACAAATATGTAAATACTACCATATTTA  449

seq1  AATTGTAGTTATCAGTGTTATTGATATGAGAAGATACAAAAATCAAGGGT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAGTTATCAGTGTTATTGATATGAGAAGATACAAAAATCAAGGGT  499

seq1  TAACTAGATAAAGTTGAAGTACAGTTGACTGTCTATTTTGAGACAGGATA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGATAAAGTTGAAGTACAGTTGACTGTCTATTTTGAGACAGGATA  549

seq1  AAATTAGAAAATAATAAGAGTTAATAGTAAAACACATGGACTGAGCTGGA  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGAAAATAATAAGAGTTAATAGTAAAACACATGGACTGAGCTGGA  599

seq1  GAGATGGCTCAGCATTTAAGAACACTAACAGCTCATCCAGAGTTCCTGAG  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGCTCAGCATTTAAGAACACTAACAGCTCATCCAGAGTTCCTGAG  649

seq1  TTTAATTTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC  699

seq1  GGATACCCTCTTCTGGTGTGTCTGACAGTATAAATAAAACACATGGTCTA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACCCTCTTCTGGTGTGTCTGACAGTATAAATAAAACACATGGTCTA  749

seq1  GAAATTATTTCTAAAGCTAGTACTATAAATTTTAAGGTCTAATACAAAAA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTATTTCTAAAGCTAGTACTATAAATTTTAAGGTCTAATACAAAAA  799

seq1  ACAAAAGGAATCATTTTCAAGTATAAAAAAATCTTAATAATAGTAGTAGT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGGAATCATTTTCAAGTATAAAAAAATCTTAATAATAGTAGTAGT  849

seq1  TAAATTAAATGAATTGGTCTGTCTACAGAAAATAACACTAATCAGTCCTC  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAATGAATTGGTCTGTCTACAGAAAATAACACTAATCAGTCCTC  899

seq1  AACAGTGATAACACTGCCACCCTCACTTCTGAAGCACTCATCCCTTGAAG  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGATAACACTGCCACCCTCACTTCTGAAGCACTCATCCCTTGAAG  949

seq1  ACCCTTGCTCAAATATGTGATCACACCCATTAGTACCTCCTAAATAGCCT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTGCTCAAATATGTGATCACACCCATTAGTACCTCCTAAATAGCCT  999

seq1  TCTGTGAAAATCCCCTTACTCTCAAAATTTCCAGTTCCATTCACTTCTGT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAAAATCCCCTTACTCTCAAAATTTCCAGTTCCATTCACTTCTGT  1049

seq1  GTGCTCCACAATATTTGAACTTGCACCTCAAGAAATATTTGCCTTCCCTG  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCCACAATATTTGAACTTGCACCTCAAGAAATATTTGCCTTCCCTG  1099

seq1  ACACTTGTCCTCCAGAATTC  1105
      ||||||||||||||||||||
seq2  ACACTTGTCCTCCAGAATTC  1119

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