BAC Information

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BAC

Clone NameB6Ng01-303N04
ChromosomeX (Build37)
Map Location 3,772,668 - 3,773,823
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC385516, LOC434721, LOC668957, LOC100043932, OTTMUSG00000016406, LOC673743, OTTMUSG00000016405, OTTMUSG00000016411, LOC668961, LOC100042159, LOC100042168
Downstream geneLOC627187, LOC100042185, OTTMUSG00000016407, OTTMUSG00000016437, OTTMUSG00000016420, LOC547057, EG546327, EG668965, LOC546185, LOC100043933, LOC670673, LOC100042254, LOC100043934, LOC100042267, LOC100042275, LOC668967, LOC434724, LOC100043935
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303N04.bB6Ng01-303N04.g
ACCGA097530GA097531
length1,154988
definitionB6Ng01-303N04.b B6Ng01-303N04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctaagacaattctctaccttcctccatcagctccagccatgc
caccatcccagctgctgcttctcatgcttcccaggtcttctctgaccact
gagcctcagcaactgtcgtcacattatctggaatgcatattcttcttgaa
tgctgctgaaggccacactctctctatctgcatgttttcattccagactc
ggaggttccttgatacctttcctggccactctgactctctgaaaagaatg
ctcaccctggaatttcatttttttgaagttaggcttgtcatgctctctct
tgtcacttaacaatatgaaaatagttcatactgacttaatagctacctgg
ctatatggctcatttcccacactaggctgagaactccatgaggataagtt
ctgttcatttgctgcctctggtcattgcaatgtctaaaacacagcatggc
agagaccactcagagtatttatgggaccgaggtaaaacaaatgaactgag
tgagaatctgtggaatcgagcatgtaaaattagacatgtatgcatgggtc
tagtcataaagctacctactaatgcactttgcaccacagtctaggcttgc
aggacaggatgaagcaaggcaactggaggcatggccaacagaaacctttt
caaggttgaaatgagatagacctttcctcataccagggtgcttgtatact
tgttagaatatgggtcctattccaacgcctttacatgatacgaactgtaa
ctgttgctttatttacacagatagtgagatgagatgagagccgtttccaa
gctcttcagatacacagtttgggcagatagtttctctgtaatacatattt
ctaggccaaagcttggaagcttctaccctccatacagtataatctcccaa
gctgacagattccattcaacttctctcagcttctcaatgtgttgctctgc
ttggcatcatacaatggtggcagtctattctaatcttctggctcatcctt
gtcatcctctgtgtctagcttgttctttctgcaactgtctctgtaaaaat
gtccttgggaaattgcttgcaagcacattatacatcaacacaacacacca
ccatcaccaccacaacgacacatggtgccctaagctctagctgttccctc
cctg
gaattcttcgtcatcttttttttaactatttgtggttgaaatattatttt
attggatattaggatggctccaggaaggaggaattatctttgctgtcttc
actactgcagctgcattcaccactgctgtagtttttgttgctccaagatg
cattatgctgagtcatacctggctgagctggtgggaggctgacttgccag
ggagaggtggtagggagcttcttgtggtgttttgggaaagcaggtccttt
ctctggtggtggagttacaactcttatgacagaggctttcagataatgac
agagtaattctcatacacctttttttttcttctcaataggtttcttatat
acagtcttggtgtgggtcagagtatgacagtaggtgtttactattggctt
gacctaagaggatggggatacctcatctacatgtgggagggcttggagtg
ctgtctttatatgactgaaagccacaaacctctctaaagtgggtatgtga
ctacatggcagggacctggttacggaagcacgcaaagcttctactgtccc
ttcagggttcccagggctttaaatcttagctcaaccttaccaggcatcct
ctcacaacccacagccacatactatttcagcttgtttcttgtgactgctt
gcaaaacttttttccaaccttttattctgaggtaggatctgtgtttgtca
ctgaggtgtattacttgtatgaagcaaagggctggatcctgcttatgtac
ccagtcttttagccagtgtctttttattaggcagttgaacccatttgatg
tcaagagatattaaagacagatgattattagttcctgatattttttgttg
ttggagatggtattctgtgtttatgatcctcttctatgggtttgttgtga
aatgtttagtttcttatgctttcttgggtgagtaccctcctgtattggaa
atttttgttccatattctctttagggcctagattagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_3772668_3773823
seq2: B6Ng01-303N04.b_43_1196

seq1  GAATTCACCTAAGACAATTCTCTACCTTCCTCCATCAGCTCCAGCCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTAAGACAATTCTCTACCTTCCTCCATCAGCTCCAGCCATGC  50

seq1  CACCATCCCAGCTGCTGCTTCTCATGCTTCCCAGGTCTTCTCTGACCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCCCAGCTGCTGCTTCTCATGCTTCCCAGGTCTTCTCTGACCACT  100

seq1  GAGCCTCAGCAACTGTCGTCACATTATCTGGAATGCATATTCTTCTTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCAGCAACTGTCGTCACATTATCTGGAATGCATATTCTTCTTGAA  150

seq1  TGCTGCTGAAGGCCACACTCTCTCTATCTGCATGTTTTCATTCCAGACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGAAGGCCACACTCTCTCTATCTGCATGTTTTCATTCCAGACTC  200

seq1  GGAGGTTCCTTGATACCTTTCCTGGCCACTCTGACTCTCTGAAAAGAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTTCCTTGATACCTTTCCTGGCCACTCTGACTCTCTGAAAAGAATG  250

seq1  CTCACCCTGGAATTTCATTTTTTTGAAGTTAGGCTTGTCATGCTCTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCTGGAATTTCATTTTTTTGAAGTTAGGCTTGTCATGCTCTCTCT  300

seq1  TGTCACTTAACAATATGAAAATAGTTCATACTGACTTAATAGCTACCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTTAACAATATGAAAATAGTTCATACTGACTTAATAGCTACCTGG  350

seq1  CTATATGGCTCATTTCCCACACTAGGCTGAGAACTCCATGAGGATAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGGCTCATTTCCCACACTAGGCTGAGAACTCCATGAGGATAAGTT  400

seq1  CTGTTCATTTGCTGCCTCTGGTCATTGCAATGTCTAAAACACAGCATGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCATTTGCTGCCTCTGGTCATTGCAATGTCTAAAACACAGCATGGC  450

seq1  AGAGACCACTCAGAGTATTTATGGGACCGAGGTAAAACAAATGAACTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCACTCAGAGTATTTATGGGACCGAGGTAAAACAAATGAACTGAG  500

seq1  TGAGAATCTGTGGAATCGAGCATGTAAAATTAGACATGTATGCATGGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATCTGTGGAATCGAGCATGTAAAATTAGACATGTATGCATGGGTC  550

seq1  TAGTCATAAAGCTACCTACTAATGCACTTTGCACCACAGTCTAGGCTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATAAAGCTACCTACTAATGCACTTTGCACCACAGTCTAGGCTTGC  600

seq1  AGGACAGGATGAAGCAAGGCAACTGGAGGCATGGCCAACAGAAACCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGGATGAAGCAAGGCAACTGGAGGCATGGCCAACAGAAACCTTTT  650

seq1  CAAGGTTGAAATGAGATAGACCTTTCCTCATACCAGGGTGCTTGTATACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTGAAATGAGATAGACCTTTCCTCATACCAGGGTGCTTGTATACT  700

seq1  TGTTAGAATATGGGTCCTATTCCAACGCCTTTACATGATACGAACTGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAATATGGGTCCTATTCCAACGCCTTTACATGATACGAACTGTAA  750

seq1  CTGTTGCTTTATTTACACAGATAGTGGGATGAGATGAGAGCCGTTTCCAA  800
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTGTTGCTTTATTTACACAGATAGTGAGATGAGATGAGAGCCGTTTCCAA  800

seq1  GCTCTTCAGATACACAGTTTGGGCAGATAGTTTCTCTGTAATACATATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCAGATACACAGTTTGGGCAGATAGTTTCTCTGTAATACATATTT  850

seq1  CTAGGCCAAAGCTTGGAAGCTTCTACCCTCCATACAGTATAATCTCCCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCAAAGCTTGGAAGCTTCTACCCTCCATACAGTATAATCTCCCAA  900

seq1  GCTGACAGATTCCATTCAACTTCTCTCAGCTTCTCAATATGTTGCTCTGC  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCTGACAGATTCCATTCAACTTCTCTCAGCTTCTCAATGTGTTGCTCTGC  950

seq1  TTGGCATCATACAATGGTGGCAGTCTATTCTAATCTTCTGGCTCATCC-T  999
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTGGCATCATACAATGGTGGCAGTCTATTCTAATCTTCTGGCTCATCCTT  1000

seq1  GTCATCCTCTGTGTCTAGCTTGTTCTTTCTGCAAACTGTCTCTGTAAAAA  1049
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTCATCCTCTGTGTCTAGCTTGTTCTTTCTGC-AACTGTCTCTGTAAAAA  1049

seq1  TGTCCTGGGAAAATTGCCTTGCAGGCACA-TATACCATCACCACCACCAC  1098
      |||||| || |||||| |||||| ||||| |||| ||||| ||| ||   
seq2  TGTCCTTGGGAAATTG-CTTGCAAGCACATTATA-CATCAACACAAC--A  1095

seq1  CACCACCATCACCACCACCACGACCACAT-GTGCC--TAGCTCTAGCTTG  1145
      |||||||||||||||||| |||| ||||| |||||   ||||||||| ||
seq2  CACCACCATCACCACCACAACGA-CACATGGTGCCCTAAGCTCTAGC-TG  1143

seq1  TTCTCTCCCTG  1156
      ||| |||||||
seq2  TTCCCTCCCTG  1154