BAC Information

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BAC

Clone NameB6Ng01-304K16
ChromosomeX (Build37)
Map Location 15,809,761 - 15,810,908
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043949, LOC100043950, Cypt6, LOC100038939, LOC668993, Maoa, Maob, Ndph, LOC100043063, Efhc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304K16.bB6Ng01-304K16.g
ACCGA098165GA098166
length1,1641,155
definitionB6Ng01-304K16.b B6Ng01-304K16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaatagaggaatctcaaatgattgaaaaaaaaaaaaaacttaa
ggaaatgttcaacatctttagccatcatggaagtgcaattcaatggaggt
acaattcaaaacttctttgagattctatctattctacaggttcaatgcaa
tccccatcaaaattccaactcaattcttcaacgaattagaaggagcaatt
tgcaaattcatcgggaataacaaaaaacctaggatagcaaaaagtcttct
caaggataaaagaacctctggtggaatcaccatgcctgacctaaagcttt
actacagagcaattgtgataaaaactgcatggtactggtatagagacaga
caagtagaccaatggaatagaattgaagacccagaaatgaacccacacac
ctatggtcacttgatcttcgacaagggagctaaaaccatccagtggaaga
aagacagcattttcaacaattggtgctggcacaactggttgttatcatgt
agaagaatgcaaatcgatccatacttatctccttgtactaaggtcaaatc
taagtggatcaaagaacttcacataaaaccagagacactgaaacttatag
aggagaaagtggggaaaagccttgaagatgtgggctcaggggaaaaattc
ctgaacagaacagcaatggcatgtgctgtaagatcgagaattgacaaatg
ggacctaatgaaactccaaagtttctgcaaggcaaaagacaccgtcaata
agacaaaaagaccaccaacagattgggaaaggatctttacctatcctaaa
tcagatagggggctaatatccaacatatataaagaactcaagaaggtgga
cttcagaaaatcgaacaaccccatcaaaaaatggggctcagaactgaaca
aagaattctcacctgaggaataccgaatggcagagagcacctgaaaaatg
ttcacatccttaatcatcagggaaatgcaaatcaaacacctgagattcca
cctgtcagatagtaagatcactaacacagttgacatctcatgtgactgac
agcaagggaacatttctcatgcatgggagtctactaatacactaagaatc
aatatgtagtttctcgagatgatcaatcacctcaagatcagctatatcga
ttctctggcacgct
gaattctagtgctgaagaatttcttagcctttgtaccagtagtctgttga
agagatctctcaccctcccttgttatctgaaagaactacatactaatgtc
atcagggcactggtttgagacaaagatagaatgtagatggggattcatga
gaaggggcagaggtagatgtgaagtttatagaaggcatgagaaaatcttc
gagggacggatggctacagaatgcaggaaatgagattagcttgatacctc
tcaccttactaggacttctgggaaaagaggagcatgcctcctcttgggac
atttggacattggttgacaggacattctccgtttcttcttcagcttggat
tttgtggctgctcctgccttagcactaggcttgcaggctttcttggccac
ccatgccatattggagctctctcagggactggccccaaagctctgagcat
cctgcttatctccctgtcagtacaatggtgagacacactccacagttttg
agtggtcagaaaagtcctcgctagccaatggcagctaaggagtggctgag
acctcacaaagctctgttttttgaggatatcttacctatcgcagatatgg
tttgaaggcttgcaagtgcataggtcatgtaatgtgtgcctgctaccatg
ggccctgaatctatgctcattaatcctgtaattcttttaaaatataatct
cccagttaaaccctttcctttatacattgactggtcatgacatctcttca
cagcaaatgaaaaataacttagactgatgagcaatgggaagttgatatga
taaaaatgtcatatctatgtacataaaattatcacagaattaatttttat
ggaaaatgaacattgctgaatggtattatgcagaatgaaaatgacaaaaa
agaatcagtaaaatttgaggacacatcaacagaatttgtcccacttaatc
taagataagatattctgtattttatgttacgtgtggaaggaatcatgtct
gcgtgcatttcatgcagagctccatgagggcagaaaagggtattagaatc
atatgtactgaattaatagaattatctgttgtgttttcacatatgtgctt
gagaataaaatcctaggaattcaaagcaaacctgtttattcctaattgca
tatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_15809761_15810908
seq2: B6Ng01-304K16.g_67_1221 (reverse)

seq1  ATATATGCATTTA-GAATAAACAGTTTTCCTTTTGAAT--CT-GGGTTTT  46
      ||||||||| ||| |||||||||| ||| | |||||||  || || ||||
seq2  ATATATGCAATTAGGAATAAACAGGTTTGC-TTTGAATTCCTAGGATTTT  49

seq1  ATTCTC-AGCACATATGTGAAAACAC-ACAGATAATTCTA-TAATTCAGT  93
      |||||| ||||||||||||||||||| ||||||||||||| |||||||| 
seq2  ATTCTCAAGCACATATGTGAAAACACAACAGATAATTCTATTAATTCAG-  98

seq1  TACATATGA-TCTAATACCCTTTTCTGCCCTCATGGAGCTCTGCATGAAA  142
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGATTCTAATACCCTTTTCTGCCCTCATGGAGCTCTGCATGAAA  148

seq1  TGCACGCAGACATGATTCC-TCCACACGTAACATAAAATACAGAATATCT  191
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGCACGCAGACATGATTCCTTCCACACGTAACATAAAATACAGAATATCT  198

seq1  TATCTTAGATTAAGTGGGACAAATTCTGTTGATGTGTCCTCAAATTTTAC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTAGATTAAGTGGGACAAATTCTGTTGATGTGTCCTCAAATTTTAC  248

seq1  TGATTCTTTTTTGTCATTTTCATTCTGCATAATACCATTCAGCAATGTTC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTTTTTTGTCATTTTCATTCTGCATAATACCATTCAGCAATGTTC  298

seq1  ATTTTCCATAAAAATTAATTCTGTGATAATTTTATGTACATAGATATGAC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCATAAAAATTAATTCTGTGATAATTTTATGTACATAGATATGAC  348

seq1  ATTTTTATCATATCAACTTCCCATTGCTCATCAGTCTAAGTTATTTTTCA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATCATATCAACTTCCCATTGCTCATCAGTCTAAGTTATTTTTCA  398

seq1  TTTGCTGTGAAGAGATGTCATGACCAGTCAATGTATAAAGGAAAGGGTTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGTGAAGAGATGTCATGACCAGTCAATGTATAAAGGAAAGGGTTT  448

seq1  AACTGGGAGATTATATTTTAAAAGAATTACAGGATTAATGAGCATAGATT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGAGATTATATTTTAAAAGAATTACAGGATTAATGAGCATAGATT  498

seq1  CAGGGCCCATGGTAGCAGGCACACATTACATGACCTATGCACTTGCAAGC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCCATGGTAGCAGGCACACATTACATGACCTATGCACTTGCAAGC  548

seq1  CTTCAAACCATATCTGCGATAGGTAAGATATCCTCAAAAAACAGAGCTTT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAACCATATCTGCGATAGGTAAGATATCCTCAAAAAACAGAGCTTT  598

seq1  GTGAGGTCTCAGCCACTCCTTAGCTGCCATTGGCTAGCGAGGACTTTTCT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTCTCAGCCACTCCTTAGCTGCCATTGGCTAGCGAGGACTTTTCT  648

seq1  GACCACTCAAAACTGTGGAGTGTGTCTCACCATTGTACTGACAGGGAGAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTCAAAACTGTGGAGTGTGTCTCACCATTGTACTGACAGGGAGAT  698

seq1  AAGCAGGATGCTCAGAGCTTTGGGGCCAGTCCCTGAGAGAGCTCCAATAT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGATGCTCAGAGCTTTGGGGCCAGTCCCTGAGAGAGCTCCAATAT  748

seq1  GGCATGGGTGGCCAAGAAAGCCTGCAAGCCTAGTGCTAAGGCAGGAGCAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGGTGGCCAAGAAAGCCTGCAAGCCTAGTGCTAAGGCAGGAGCAG  798

seq1  CCACAAAATCCAAGCTGAAGAAGAAACGGAGAATGTCCTGTCAACCAATG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAATCCAAGCTGAAGAAGAAACGGAGAATGTCCTGTCAACCAATG  848

seq1  TCCAAATGTCCCAAGAGGAGGCATGCTCCTCTTTTCCCAGAAGTCCTAGT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATGTCCCAAGAGGAGGCATGCTCCTCTTTTCCCAGAAGTCCTAGT  898

seq1  AAGGTGAGAGGTATCAAGCTAATCTCATTTCCTGCATTCTGTAGCCATCC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGAGAGGTATCAAGCTAATCTCATTTCCTGCATTCTGTAGCCATCC  948

seq1  GTCCCTCGAAGATTTTCTCATGCCTTCTATAAACTTCACATCTACCTCTG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCGAAGATTTTCTCATGCCTTCTATAAACTTCACATCTACCTCTG  998

seq1  CCCCTTCTCATGAATCCCCATCTACATTCTATCTTTGTCTCAAACCAGTG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCTCATGAATCCCCATCTACATTCTATCTTTGTCTCAAACCAGTG  1048

seq1  CCCTGATGACATTAGTATGTAGTTCTTTCAGATAACAAGGGAGGGTGAGA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGATGACATTAGTATGTAGTTCTTTCAGATAACAAGGGAGGGTGAGA  1098

seq1  GATCTCTTCAACAGACTACTGGTACAAAGGCTAAGAAATTCTTCAGCACT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTTCAACAGACTACTGGTACAAAGGCTAAGAAATTCTTCAGCACT  1148

seq1  AGAATTC  1148
      |||||||
seq2  AGAATTC  1155