BAC Information

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BAC

Clone NameB6Ng01-306N22
ChromosomeX (Build37)
Map Location 147,377,363 - 147,528,706
singlet/doubletdoublet
Overlap geneGnl3l, Fgd1, Tsr2
Upstream geneLOC382244, LOC100039669, EG666982, EG624631, EG546387, LOC333588, Tmem29, LOC100040101, Alas2, Apex2, Pfkfb1, Tro, LOC100039716, Maged2, Itih5l, LOC667021
Downstream geneLOC100040221, EG667027, Wnk3, LOC675278, ORF34, LOC623804, LOC100039760, Phf8, LOC385448, LOC237116, Huwe1, LOC675514, Hsd17b10, Ribc1, Smc1a, LOC100040394
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306N22.bB6Ng01-306N22.g
ACCGA099790GA099791
length320355
definitionB6Ng01-306N22.b B6Ng01-306N22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,377,363 - 147,377,682)(147,528,352 - 147,528,706)
sequence
attataaaaagagaatgcatgctaacatcaggaatagtgaaggccatgtt
gagtgggctctttcttcctcctagcccttttccttcctaacaaaagttca
gtgatagggctcccaatggaggagctagagaaagtacccaaggagctaaa
gggatctgcaaccctataggtggaacaacattatgaactaaccagtaccc
cggagctctggactctagctgcatatgtatcaaaagatggcccattggac
acgcaaactgtatatgccccagtacaggggaacgccagggccaaaaagta
ggagtgggtgggtaggggag
ttcagttaactgagcctgaggagaagcctttttgatttgatttttgtttt
ttgggttttttttttttttttttttttttgagacagggtttcgctatgta
gcactgactattctagaactcttctgttgaccaggctggcctcagactcc
gagatctacctgtctcttgtctcccaagtgctgggattaaaggtgtgcgc
gccaccactggtcagtaagaggccttcttaagagtagcgattagagtgag
gcctaaggaatgaaaagggggaaactaggtagagatgataaagcatgtac
tcaaaggagttaagtgcattatattaaggggatggaagagtggtagagaa
tggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_147377363_147377682
seq2: B6Ng01-306N22.b_53_372

seq1  ATTATAAAAAGAGAATGCATGCTAACATCAGGAATAGTGAAGGCCATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAAAAGAGAATGCATGCTAACATCAGGAATAGTGAAGGCCATGTT  50

seq1  GAGTGGGCTCTTTCTTCCTCCTAGCCCTTTTCCTTCCTAACAAAAGTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGCTCTTTCTTCCTCCTAGCCCTTTTCCTTCCTAACAAAAGTTCA  100

seq1  GTGATAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAA  150

seq1  GGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCC  200

seq1  CGGAGCTCTGGACTCTAGCTGCATATGTATCAAAAGATGGCCCATTGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGCTCTGGACTCTAGCTGCATATGTATCAAAAGATGGCCCATTGGAC  250

seq1  ACGCAAACTGTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAAACTGTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGTA  300

seq1  GGAGTGGGTGGGTAGGGGAG  320
      ||||||||||||||||||||
seq2  GGAGTGGGTGGGTAGGGGAG  320

seq1: chrX_147528352_147528706
seq2: B6Ng01-306N22.g_69_423 (reverse)

seq1  CACCATTCTCTACCACTCTTCCATCCCCTTAATATAATGCACTTAACTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTCTCTACCACTCTTCCATCCCCTTAATATAATGCACTTAACTCC  50

seq1  TTTGAGTACATGCTTTATCATCTCTACCTAGTTTCCCCCTTTTCATTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTACATGCTTTATCATCTCTACCTAGTTTCCCCCTTTTCATTCCT  100

seq1  TAGGCCTCACTCTAATCGCTACTCTTAAGAAGGCCTCTTACTGACCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCTCACTCTAATCGCTACTCTTAAGAAGGCCTCTTACTGACCAGTG  150

seq1  GTGGCGCGCACACCTTTAATCCCAGCACTTGGGAGACAAGAGACAGGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCGCGCACACCTTTAATCCCAGCACTTGGGAGACAAGAGACAGGTAG  200

seq1  ATCTCGGAGTCTGAGGCCAGCCTGGTCAACAGAAGAGTTCTAGAATAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCGGAGTCTGAGGCCAGCCTGGTCAACAGAAGAGTTCTAGAATAGTC  250

seq1  AGTGCTACATAGCGAAACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTACATAGCGAAACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAA  300

seq1  CCCAAAAAACAAAAATCAAATCAAAAAGGCTTCTCCTCAGGCTCAGTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAAACAAAAATCAAATCAAAAAGGCTTCTCCTCAGGCTCAGTTAA  350

seq1  CTGAA  355
      |||||
seq2  CTGAA  355