This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
B6Ng01-308O22
Chromosome
X (Build37)
Map Location
81,241,228 - 81,242,354
singlet/doublet
singlet
Overlap gene
Dmd
Upstream gene
Tsga8
Downstream gene
LOC100042306
Link
Open Mouse BAC browser
Click to get alignment info.
name
Dmd
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:13405
MGI:94909
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Tsga8
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:60600
MGI:1194903
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 1 Protein
name
LOC100042306
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100042306
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 161 ESTs
name
Dmd
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:142357345
GeneID:13405
MGI:94909
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: dystrophin, muscular dystrophy
transcript_id
: NM_007868.2
name
LOC100042306
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149271794
GeneID:100042306
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 161 ESTs
product
: similar to pORF2
transcript_id
: XM_001478003.1
name
Dmd
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:6681203
GeneID:13405
MGI:94909
definition
GO_component
: GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005626 - insoluble fraction [Evidence IDA]; GO:0005792 - microsome [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0042383 - sarcolemma [Evidence IDA] [Evidence TAS]; GO:0045202 - synapse [Evidence IDA]
GO_function
: GO:0003779 - actin binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO_process
: GO:0007517 - muscle development [Evidence IMP]; GO:0007519 - striated muscle development [Evidence IMP] [Evidence IGI]
codon_start
: 1
note
: Duchenne muscular dystrophy; X-linked muscular dystrophy; dystrophin Dp71
product
: dystrophin, muscular dystrophy
protein_id
: NP_031894.1
name
LOC100042306
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149271795
GeneID:100042306
definition
codon_start
: 1
product
: similar to pORF2
protein_id
: XP_001478053.1
name
Tsga8
(CDS detail)
type
misc_RNA
link
vega
ensembl
MGI
NCBI
xref
GI:149271791
GeneID:60600
MGI:1194903
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 1 Protein
product
: testis specific gene A8
transcript_id
: XR_035356.1
clone name
MSMg01-514I19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-442L01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-045H01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-070F13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-098L01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-144M19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-547P17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-457F19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-462C20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-316F13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-236O10
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-101G12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-265P19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-144J22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-488A09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-105M17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-262D21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-429F02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-184P14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-482A03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-202D02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-498C18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-492K21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-313J19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-545D02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-313K19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-400F16
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-059M01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-524D02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-061A22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-110A23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-089C06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-543K09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-109B01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-050C24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-193F13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-235M18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-528C19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-181H24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-057O07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-341H20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-336L16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-452M11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-342L10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-294F23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-061D12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-496I16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-455I04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-084M21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-084O19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-095F20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-207H09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-471M03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-319L24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-451D24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-471E18
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-416J03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-464N17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-301M17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-339A16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-391N17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-127A14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-376K03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-352O23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-537N18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-411K06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-125B01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-484D03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-147M24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-112F24
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-474L18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-380A04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-396A04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-415J10
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-136H19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-438P10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-510F22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-274B09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-206K07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-337C09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-201G03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-321E06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-069D16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-042B12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-199C20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-124A18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-162N21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-132D20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-250C09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-214E05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-004J20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-062M01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-232B20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-232L01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-044L17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-269P22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-196J16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-057L10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-215O17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-101H06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-028K11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-191D01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-253M02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-317B09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-145L10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-093H18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-295J23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-281E20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-124L03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-308O22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-044P12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-125F23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-135F15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-309O03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-126D04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-100H24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-120A23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-155F17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-139N11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-120G04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-267N08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-313K03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-262K11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-128H13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-266N24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-262C21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-192G20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-142L15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-052P08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-219K20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-342D16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-056E06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-011F21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-265P22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-163N19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-316B13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-035N18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-291H16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-209B24
singlet/doublet
doublet
plural/unique
unique