BAC Information

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BAC

Clone NameB6Ng01-309O05
ChromosomeX (Build37)
Map Location 37,155,906 - 37,156,968
singlet/doubletsinglet
Overlap genenone
Upstream gene6030498E09Rik, LOC547171, LOC670539, LOC100039700, 1700085A12Rik, LOC100039715
Downstream geneEG636756, EG636766, EG245391, LOC100039769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309O05.bB6Ng01-309O05.g
ACCGA102016GA102017
length1,1701,068
definitionB6Ng01-309O05.b B6Ng01-309O05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcatctctgagccccatcttttaagggggctatttgatt
tttctggagtccaccctcttcatttctttatatatattggataatagtcc
cctatctgatttaagataggtaaagatcctttcccaacctgttggtggtc
tgtttgtcttattgatggtgtcttttgccttgcagaagctttgcagtttc
atgaggtcccatttgtcaatcctcgatcttaaagcaaaagccattgctat
tctattcaggaattttttccctgtgcccatatcttcgagacttttcccca
ctttctcctctataagtttcagtgtctgtggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagagaggaatgggtcaattcg
cattcttctacatgataacaaccagttgtgccagcaccatttgttgaaaa
tgctgtcttttttccactggatggttttagctcccttgtcgaagatcaag
tgaacataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtcactataccagtaccatgcagtttttatcgcaattg
ctctgtagtaaagctttaggtcaggcatgatgattccaacagaggtactt
ttatccttgagaagagcttttgctatcctaggatttttgttatttcagat
gaatttgcagattgctctttcaaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatcagtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttccttaatttctttcttcaggacttgaagttttatcatac
agatctttcacttccttagttagagtcacgccaagatatttatattattt
gtgactattgagacgtgttgttcctaatttctttctcagcctgttattct
tttgtgtagagaacgcatggactgttgaggtatttatattccagctactt
caccgaagcttttttataagttgaggatctctggtggatttaagagctac
cttaatacctaactaacatctgcaattgcaattatgactcacttcaatgt
attccccttggtactccctg

gaattctcttaatgctggctcctttatcagcaaatagggctaatgttacc
catgggcactgaggattatattgacttagttctattattttattgatgca
gtctgacttttatcttataaatgttatattaccttcatttattttattat
tagcattaatattgattatatgtatgtgtttgtttgtaatatgattggtg
tagtgaccaaaggacattttgtatgagacagttctcttcttccaccatgg
cagtccttgggatcaaactcaggctttcaggctaggtggcaagcgccttt
acccactaaaccattctgtggatctctctattctttctttgccttgctgt
ttttcttttccttttatttctttctgttctttgttacatatcccagcctc
gctttagaataactacataattaaaattaaccttgtatgctccaattctt
tcaaaattacagaattacaagcatgtagtatcatatgtgtttctcactat
ttgaagataactgaatacagttgttaacattgttgatgaactggagaaaa
tattgggaaaatacagaatatgttaatcaaaaattttctatgttagtttg
ctttaatctataaaattttagtaatgattagcatatgcgacaatgctttg
tataataataaaagatctcagtaaaagttttatactgtccttggaatata
ggtagtactcaataaaggcttatttcattgtctactcattcttagagagg
tttagttgcatttaattcaaaacagtgactttcaaaaataaaaaaataaa
aaaacaaacaaagaccagaaagctgccaggtacaaaagtaatgaagctac
tttcttaaaactactatttattaggaccatttatttgtttatctgttcaa
tacattcagtgcccagtgaatgtcagaacctgttaaaagctgaagttaat
aatgattagggaaataaaggctgtagtaatttcaatataatatgtcatca
tgtttggggaaagccctttgaaaaatagaaatgattactgcaagttattt
ggcagtactggtctggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_37155906_37156968
seq2: B6Ng01-309O05.g_65_1132

seq1  GAATTCTCTTAATGCTGGCTCCTTTATCAGCAAATAGGGCTAATGTTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAATGCTGGCTCCTTTATCAGCAAATAGGGCTAATGTTACC  50

seq1  CATGGGCACTGAGGATTATATTGACTTAGTTCTATTATTTTATTGATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCACTGAGGATTATATTGACTTAGTTCTATTATTTTATTGATGCA  100

seq1  GTCTGACTTTTATCTTATAAATGTTATATTACCTTCATTTATTTTATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACTTTTATCTTATAAATGTTATATTACCTTCATTTATTTTATTAT  150

seq1  TAGCATTAATATTGATTATATGTATGTGTTTGTTTGTAATATGATTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTAATATTGATTATATGTATGTGTTTGTTTGTAATATGATTGGTG  200

seq1  TAGTGACCAAAGGACATTTTGTATGAGACAGTTCTCTTCTTCCACCATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGACCAAAGGACATTTTGTATGAGACAGTTCTCTTCTTCCACCATGG  250

seq1  CAGTCCTTGGGATCAAACTCAGGCTTTCAGGCTAGGTGGCAAGCGCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTTGGGATCAAACTCAGGCTTTCAGGCTAGGTGGCAAGCGCCTTT  300

seq1  ACCCACTAAACCATTCTGTGGATCTCTCTATTCTTTCTTTGCCTTGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTAAACCATTCTGTGGATCTCTCTATTCTTTCTTTGCCTTGCTGT  350

seq1  TTTTCTTTTCCTTTTATTTCTTTCTGTTCTTTGTTACATATCCCAGCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTCCTTTTATTTCTTTCTGTTCTTTGTTACATATCCCAGCCTC  400

seq1  GCTTTAGAATAACTACATAATTAAAATTAACCTTGTATGCTCCAATTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGAATAACTACATAATTAAAATTAACCTTGTATGCTCCAATTCTT  450

seq1  TCAAAATTACAGAATTACAAGCATGTAGTATCATATGTGTTTCTCACTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATTACAGAATTACAAGCATGTAGTATCATATGTGTTTCTCACTAT  500

seq1  TTGAAGATAACTGAATACAGTTGTTAACATTGTTGATGAACTGGAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGATAACTGAATACAGTTGTTAACATTGTTGATGAACTGGAGAAAA  550

seq1  TATTGGGAAAATACAGAATATGTTAATCAAAAATTTTCTATGTTAGTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGAAAATACAGAATATGTTAATCAAAAATTTTCTATGTTAGTTTG  600

seq1  CTTTAATCTATAAAATTTTAGTAATGATTAGCATATGCGACAATGCTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCTATAAAATTTTAGTAATGATTAGCATATGCGACAATGCTTTG  650

seq1  TATAATAATAAAAGATCTCAGTAAAAGTTTTATACTGTCCTTGGAATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAATAAAAGATCTCAGTAAAAGTTTTATACTGTCCTTGGAATATA  700

seq1  GGTAGTACTCAATAAAGGCTTATTTCATTGTCTACTCATTCTTAGAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTACTCAATAAAGGCTTATTTCATTGTCTACTCATTCTTAGAGAGG  750

seq1  TTTAGTTGCATTTAATTCAAAACAGTGACTTTCAAAAATAAAAAAATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTGCATTTAATTCAAAACAGTGACTTTCAAAAATAAAAAAATAAA  800

seq1  AAAACAAACAAAGACCAGAAAGCTGCCAGGTACAAAAGTAATGAAGCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACAAAGACCAGAAAGCTGCCAGGTACAAAAGTAATGAAGCTAC  850

seq1  TTTCTTAAAACTACTATTTATTAGGACCATTTATTTGTTTATCTGTTC-A  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTCTTAAAACTACTATTTATTAGGACCATTTATTTGTTTATCTGTTCAA  900

seq1  TACATTCAGTGCCCAGTGAATGTCAGAACCTGTTAAAAGCTGAAGTTAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCAGTGCCCAGTGAATGTCAGAACCTGTTAAAAGCTGAAGTTAAT  950

seq1  AATGA-TAGGGAAATAAAGGCTGTAGTAATTTC-ATATAATATGTCATCA  997
      ||||| ||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATGATTAGGGAAATAAAGGCTGTAGTAATTTCAATATAATATGTCATCA  1000

seq1  TGTTTTGGGGAAAG-CCTTTGAAAAATAGAAATGATTACTGCAAG-TATA  1045
      || ||||||||||| |||||||||||||||||||||||||||||| ||| 
seq2  TG-TTTGGGGAAAGCCCTTTGAAAAATAGAAATGATTACTGCAAGTTATT  1049

seq1  TTGCAGTA-TGGTCTGGTA  1063
      | |||||| ||||||||||
seq2  TGGCAGTACTGGTCTGGTA  1068


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