BAC Information

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BAC

Clone NameB6Ng01-313O09
ChromosomeX (Build37)
Map Location 80,109,248 - 80,109,834
singlet/doubletsinglet
Overlap genenone
Upstream geneEG629310
Downstream geneDmd, Tsga8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313O09.bB6Ng01-313O09.g
ACCGA104983GA104984
length1,215587
definitionB6Ng01-313O09.b B6Ng01-313O09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaaccc
atagccaacatcaaactaaatggagagaaacttgaagcaattccactgaa
atcagggactagacaaggctgcccactttctccatacctattcaacatag
tattcgaagtcctagccagagcaattcggcaacaaaaggagatcaagggt
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccttaaaaactccacaaaagaactcctaaacc
tgataatcagcttcagtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacacaggataaacaggctgtgaaaaaaattag
ggaaacaacacccttcacaatagtcacaaataatataaaataccttggag
tgactaactaaggaagtaaaagatctgtatgataggaacttcaagtctct
taagaaagaaattaaagaagagctcagaagatggaaagatttcccatgct
catagattggcaggatcaatatagtaaaaatggctatcttgccaaaagca
atctacagattcagtgcaatccccatcaaaattccaaatcaattcttcaa
caatttagaaagggcatctgcaaatttatctcgaataacaaaaagcctag
gatagcaaaaactctgctcaaggataaaaaaacttctggtggaataatga
tgcctgacctaaaactgtactacagagcaattgtgataaaaactgcatgg
tactggtatagtgacaaatagaccaatggaatacaattgaagacccagaa
aagaactcatacacctatggtcactttatctttgacaagggagcaaaaac
catccagtggaaaaagacagcattttcaacaaatggggctggcacaactg
gtggttatcatgtaaaaaatgcaaatgatccattcctatctctgtactaa
gtcaaatctagtggatagactccacataaaacagaagacagtgaaactat
agagagaaagtaggaaagctgaagaattgggtacaggaaaatcaatagaa
cgcatgccttgtctgtagatcaagaatcgacaatggactcataatggcta
gcctctgcgagcagactgtcatagcaacggcatacgattggaaagtatct
ttacatctattcgag

gaattctctttgcctattggcgatccccaccaaagcaagtcatcttattc
ataactttagaagagataagagcgggctgttgatttcttgctattgatta
ttgtgaggtttagaagattttcttcattaagtgtttctccatgtcctaag
aatccaaaactattgtagggaactgatgtagttgtttcatttaggtttta
tatgtgctacagtgcattgagatgccagtgtgcactgataaccaggggga
tttcctgttctcagaggtgaaaataaggagtggaggaaagactatgtgac
aagggtactgggagaagagcaagagctgaaatcaggatataaaatgaata
aataaattaatggaaaaatatttctagattaactgtggaaaatatttcac
atgtgatagttgtatcattcgacaaaaaagtacatatcatcattataaaa
tattaatctctgagacaatcatatttatagcttgatatagcatatatgtt
tcttcatacctgtaaaatgaaaggctcttcatctcagcctacctgtctgc
agtggcaaaggtttgtgtgggggtggaggtgggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_80109248_80109834
seq2: B6Ng01-313O09.g_65_651 (reverse)

seq1  TCCCCCCACCTCCACCCCCACACAAACCTTTGCCACTGCAGACAGGTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCCACCTCCACCCCCACACAAACCTTTGCCACTGCAGACAGGTAGG  50

seq1  CTGAGATGAAGAGCCTTTCATTTTACAGGTATGAAGAAACATATATGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATGAAGAGCCTTTCATTTTACAGGTATGAAGAAACATATATGCTA  100

seq1  TATCAAGCTATAAATATGATTGTCTCAGAGATTAATATTTTATAATGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGCTATAAATATGATTGTCTCAGAGATTAATATTTTATAATGATG  150

seq1  ATATGTACTTTTTTGTCGAATGATACAACTATCACATGTGAAATATTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTACTTTTTTGTCGAATGATACAACTATCACATGTGAAATATTTTC  200

seq1  CACAGTTAATCTAGAAATATTTTTCCATTAATTTATTTATTCATTTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTAATCTAGAAATATTTTTCCATTAATTTATTTATTCATTTTATA  250

seq1  TCCTGATTTCAGCTCTTGCTCTTCTCCCAGTACCCTTGTCACATAGTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATTTCAGCTCTTGCTCTTCTCCCAGTACCCTTGTCACATAGTCTT  300

seq1  TCCTCCACTCCTTATTTTCACCTCTGAGAACAGGAAATCCCCCTGGTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACTCCTTATTTTCACCTCTGAGAACAGGAAATCCCCCTGGTTAT  350

seq1  CAGTGCACACTGGCATCTCAATGCACTGTAGCACATATAAAACCTAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCACACTGGCATCTCAATGCACTGTAGCACATATAAAACCTAAATG  400

seq1  AAACAACTACATCAGTTCCCTACAATAGTTTTGGATTCTTAGGACATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACTACATCAGTTCCCTACAATAGTTTTGGATTCTTAGGACATGGA  450

seq1  GAAACACTTAATGAAGAAAATCTTCTAAACCTCACAATAATCAATAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACTTAATGAAGAAAATCTTCTAAACCTCACAATAATCAATAGCAA  500

seq1  GAAATCAACAGCCCGCTCTTATCTCTTCTAAAGTTATGAATAAGATGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAACAGCCCGCTCTTATCTCTTCTAAAGTTATGAATAAGATGACT  550

seq1  TGCTTTGGTGGGGATCGCCAATAGGCAAAGAGAATTC  587
      |||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGGTGGGGATCGCCAATAGGCAAAGAGAATTC  587


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