BAC Information

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BAC

Clone NameB6Ng01-314I07
ChromosomeX (Build37)
Map Location 41,808,421 - 41,809,153
singlet/doubletsinglet
Overlap genenone
Upstream geneGm362, LOC100039977, LOC100039987, LOC637141, Wdr40c
Downstream geneWdr40b, LOC665585, 1110059M19Rik, LOC100040038
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314I07.bB6Ng01-314I07.g
ACCGA105426GA105427
length1,1321,114
definitionB6Ng01-314I07.b B6Ng01-314I07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatttgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaacagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactgggtggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggccttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcaggttttatcacaattgc
tctgtagtaaagctttaggtctggcatggatggtcttccgccagaattga
atcaaggatctacataaaaaaacaagatactcagaaactaatagaagaaa
aagtgggaaagagcttcgaacacatgggctttgccaggcccctgcatagc
ctcacaagagacagctatatcaggaagctggaaagaacccagatgtccct
caacagaggaatggatacagaaaatgtggtacatctacacaatggagtac
tactcagctattaaaaaagatgaatttatgaaatcctagccaaatggatg
gacttgggaggccatcatcctggagtgaggtaacccaattcacaatgaaa
cttccacatattgtactccactgataagttgatatagccccgaaagctag
attcctagaataagaatacacttgctaaacgctatgaacttcaggaaatg
gagactcaagtgtgaaaccttagccgtctagaatggaacaaataccttgg
aagaatttcagaacagattaggactcgttagc

gaattccaatggctcatgctctaagatcaacaattgatacatgggacctc
atgaaacgggaaagctctctaaggcaaaggacatagttaatacgacaaat
ctgcaacctacagactaggaaaaaatcttcactaacctcacatttgatag
aaagttaattctaaaaatatataaagaactcaagaagctatccaccaaaa
aaccaaacaacccaattcaaaaattgggatatagaactaaactgagaatt
gacaacagaggaatctcaaatggctgagaagctcctaaagaaatgttcat
agtccttagtgatcagagaaatgcaaatcaaaacgaccctgagtttccac
cttacaccaacaaaatggctaagataaacattccaggtgatagcacatgt
aggcaaggatgtggaaaaagaagaatactcctccattgctgatgggattg
caaactggtaaaaccacctgcaaatcaatctgaaaattcctcagaaaaat
ggaaatagatgtacctgaagacccagctataccactcttgggcatatacc
caaaagatgccccacaatgccacaggggcttgtgttccactatgtttata
gtggccttatttgtgatagccagaagctggaaacaacccagatgtcccaa
gaatgaatacagaaaatgtggttcatttacacaatggaatactactcatc
tattaagaatgaggacatcctgagttttgcaggcaaatgaatggagctag
aaaatgtcatgctgagtgaggtatctcagacccaaaaggacatgcacagt
atgtcctcacgaataagtggatattagccaaaaaaaattacaataactga
agatacagtccatagaactcaaaaagttcatcaatcactggttataaaat
tatgtttttgctctttgttttctatgataaataactgaatattttttata
gatattcatttcatttcctttttaaactcagcaaccgtatatgattttca
tttcgtattataacatcagttctcccgttggagttctttccctccaaccc
tccataatattcttcatctcttttcacatttatgatttctattatgatac
ccacacgtatgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_41808421_41809153
seq2: B6Ng01-314I07.g_452_1179

seq1  GTGATAGCACATGTAGGCAAGGATGTGGAAAAAGAAGAATACTCCTCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAGCACATGTAGGCAAGGATGTGGAAAAAGAAGAATACTCCTCCAT  50

seq1  TGCTGATGGGATTGCAAACTGGTAAAACCACCTGCAAATCAATCTGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATGGGATTGCAAACTGGTAAAACCACCTGCAAATCAATCTGAAAA  100

seq1  TTCCTCAGAAAAATGGAAATAGATGTACCTGAAGACCCAGCTATACCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAGAAAAATGGAAATAGATGTACCTGAAGACCCAGCTATACCACT  150

seq1  CTTGGGCATATACCCAAAAGATGCCCCACAATGCCACAGGGGCTTGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCATATACCCAAAAGATGCCCCACAATGCCACAGGGGCTTGTGTT  200

seq1  CCACTATGTTTATAGTGGCCTTATTTGTGATAGCCAGAAGCTGGAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATGTTTATAGTGGCCTTATTTGTGATAGCCAGAAGCTGGAAACAA  250

seq1  CCCAGATGTCCCAAGAATGAATACAGAAAATGTGGTTCATTTACACAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGATGTCCCAAGAATGAATACAGAAAATGTGGTTCATTTACACAATG  300

seq1  GAATACTACTCATCTATTAAGAATGAGGACATCCTGAGTTTTGCAGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTACTCATCTATTAAGAATGAGGACATCCTGAGTTTTGCAGGCAA  350

seq1  ATGAATGGAGCTAGAAAATGTCATGCTGAGTGAGGTATCTCAGACCCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGGAGCTAGAAAATGTCATGCTGAGTGAGGTATCTCAGACCCAAA  400

seq1  AGGACATGCACAGTATGTCCTCACGAATAAGTGGATATTAGCCAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATGCACAGTATGTCCTCACGAATAAGTGGATATTAGCCAAAAAAA  450

seq1  ATTACAATAACTGAAGATACAGTCCATAGAACTCAAAAAGTTCATCAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATAACTGAAGATACAGTCCATAGAACTCAAAAAGTTCATCAATC  500

seq1  ACTGGTTATAAAATTATGTTTTTGCTCTTTGTTTTCTATGATAAATAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTATAAAATTATGTTTTTGCTCTTTGTTTTCTATGATAAATAACT  550

seq1  GAATA--TTTTATAGATATTCATTTCATT--CCTTTTAAACTCAGCAACC  596
      |||||  ||||||||||||||||||||||  | |||||||||||||||||
seq2  GAATATTTTTTATAGATATTCATTTCATTTCCTTTTTAAACTCAGCAACC  600

seq1  GTATTATGATTTTCATTTCGTATTATAACATCAGTTCTCCC-TTTGAGTT  645
      ||| ||||||||||||||||||||||||||||||||||||| || |||||
seq2  GTA-TATGATTTTCATTTCGTATTATAACATCAGTTCTCCCGTTGGAGTT  649

seq1  C-TTCCCTCCAAACCCTCCCATATATCTTTCATTCTTCTTTTTCACATTT  694
      | |||||||| ||||||||   ||||  |||| |||   |||||||||||
seq2  CTTTCCCTCC-AACCCTCCATAATATTCTTCA-TCT--CTTTTCACATTT  695

seq1  ATGGATTTTCTATTAATTGATTTACACACACGTATGCAT  733
      |||   |||||||||  |||  ||| |||||||||||||
seq2  ATG--ATTTCTATTA--TGA--TACCCACACGTATGCAT  728


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