BAC Information

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BAC

Clone NameB6Ng01-315H10
ChromosomeX (Build37)
Map Location 134,968,111 - 134,969,207
singlet/doubletsinglet
Overlap geneIl1rapl2
Upstream gene1700025D03Rik
Downstream geneNrk, Serpina7, 4930513O06Rik, 4933428M09Rik, Mum1l1, LOC675062, Trap1a, C330013F16Rik, EG666359
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315H10.bB6Ng01-315H10.g
ACCGA106108GA106109
length1,1271,130
definitionB6Ng01-315H10.b B6Ng01-315H10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattcagattttcctggctttctaaaaaagaaataataataatgg
atgaattgtgatagaaacatcattcagtatagcaagaattttacagtcac
cacataatcagttacttcagtgtttgtcttcattctctatgaaggatgcc
acatctatttacataagcctccttcaaaaccagaattctactgaattgag
attggggatgttgtttgtagtgttccagaaataaacttgcatgctactat
attttgagcaaatgctcccaaacacatcctcatgtgacggcaacagatgt
aaagaaaaatgctatatttatttcaaacccagagaaaaatgcaagtatca
gtgcaagtgtgtgccaatgattatgcacattcttttgctgacagcttggt
gtacaaagctgctgaagtgcagagtcagcaagtttcacccagagacagct
ccacattgatagagaaaatttgagtcaataaatgaaatcaactaggagtt
tttgggtcagttacagctttcagcagatgtttcttcaccttggtattcgc
ttttttttttttttttttttttttttttactttggggagcaatcagcatt
aatataaaatgttattgtcaaattattcacttctgttcttaacttctgta
aagcaagattgttgtggaaagaaggaattttgggggtattattttatatg
ttttttgggttcttcattttgttaaaaatatttacattctgaatatctat
ttatattattttttttctttcattttttgagaatttcacaaatgtataat
acaatgatggtacaattatatcctatactcccattttttcccctctcact
ccccttcatatttctccaaaatgttccctccccaaatacatgtgttttta
gttttgggtaccccaccaagtgtgggaaaacctaccagtggcccatatcc
tcccattagaacaaccaaaagttaaaccaaaccaaccaaaaaacccactt
ggatttctgtctttcctcagccacttaccatctgctaatatctcctttca
gtagggaattgtggtgactgggagatacctctctcttatctattgccaaa
aaggttagcctgtgtcttgatggttat

gaattctcagcagaaaaattgccaatggcttagaaacactgatgaaatgt
tcaatgtccttagtcatcacaaaaatgcaaatcaacacgaccctgagatg
aaaatcttacacctgtcagaatggctaagatcaagacctcaagtcctagc
acttgctggtgaggatgtggaataagagtggcgaggatagttacactcct
ccattgctggtgggactgcaaacctgtacctcaagaccaactataacact
cctgggtatgtactcaaaaaatgctccaccatcccacaaagactatgttc
aactatgttcctagcatctttatttgtaatagcccgaaactggaaacaac
ctagatgttgctaaactaaagaatgaattaaaaaaaaatgtggtacatct
acacaatggaacactcttcagccagccagtttttagtggcattaataact
acttcatgacatggaacctaacactgttaatgataccaagagccaatgac
tagtgtgtgttataagccctaggataaatcccattgactcctaatgatat
tttgttaaatatatagatcagagaatcacacaacctttagcaaagaagct
tcttctaataaatggtacatgacatagagatccacaaggagaccaggttt
ggataatgaaagactttgatatgctcatccctatatgggatatctttacc
acattcctctgcgcaagtgtcagggatgtatgtggaagagggtgtggaac
gattgtaataaccagagttgtggatgacttgaaggaaacagcatgtttct
gaacacaacagggcagatgcatatataagaaatctcactaactataacag
aataggcaagacataaactcaagccaggcaaatctcagcatggtaggaga
ggaggtggcacaaagccccatacctagcccaataagcaattcacaattgg
gcagttactgggagacggagagcagttgtcttcaatggagtgacactgga
taatattggccatacttcaagtaaacctcatgctcagattatttgccatc
gaccagacgctatggattcttatgtgtctgttgagactgctgcttgttgt
ttgcttgtcggaagagaaacagctctctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_134968111_134969207
seq2: B6Ng01-315H10.b_47_1173

seq1  GAATTCATTCAGATTTTCCTGGCTTTCTAAAAAAGAAATAATAATAATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCAGATTTTCCTGGCTTTCTAAAAAAGAAATAATAATAATGG  50

seq1  ATGAATTGTGATAGAAACATCATTCAGTATAGCAAGAATTTTACAGTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTGTGATAGAAACATCATTCAGTATAGCAAGAATTTTACAGTCAC  100

seq1  CACATAATCAGTTACTTCAGTGTTTGTCTTCATTCTCTATGAAGGATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAATCAGTTACTTCAGTGTTTGTCTTCATTCTCTATGAAGGATGCC  150

seq1  ACATCTATTTACATAAGCCTCCTTCAAAACCAGAATTCTACTGAATTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTATTTACATAAGCCTCCTTCAAAACCAGAATTCTACTGAATTGAG  200

seq1  ATTGGGGATGTTGTTTGTAGTGTTCCAGAAATAAACTTGCATGCTACTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGATGTTGTTTGTAGTGTTCCAGAAATAAACTTGCATGCTACTAT  250

seq1  ATTTTGAGCAAATGCTCCCAAACACATCCTCATGTGACGGCAACAGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAGCAAATGCTCCCAAACACATCCTCATGTGACGGCAACAGATGT  300

seq1  AAAGAAAAATGCTATATTTATTTCAAACCCAGAGAAAAATGCAAGTATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAATGCTATATTTATTTCAAACCCAGAGAAAAATGCAAGTATCA  350

seq1  GTGCAAGTGTGTGCCAATGATTATGCACATTCTTTTGCTGACAGCTTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAGTGTGTGCCAATGATTATGCACATTCTTTTGCTGACAGCTTGGT  400

seq1  GTACAAAGCTGCTGAAGTGCAGAGTCAGCAAGTTTCACCCAGAGACAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAGCTGCTGAAGTGCAGAGTCAGCAAGTTTCACCCAGAGACAGCT  450

seq1  CCACATTGATAGAGAAAATTTGAGTCAATAAATGAAATCAACTAGGAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTGATAGAGAAAATTTGAGTCAATAAATGAAATCAACTAGGAGTT  500

seq1  TTTGGGTCAGTTACAGCTTTCAGCAGATGTTTCTTCACCTTGGTATTCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTCAGTTACAGCTTTCAGCAGATGTTTCTTCACCTTGGTATTCGC  550

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTTGGGAGACAATCAGCATT  600
      ||||||||||||||||||||||||||||||||||||   |||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTTGGGGAGCAATCAGCATT  600

seq1  AATATAAAATGTTATTGTCAAATTATTCACTTCTGTTCTTAACTTCTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAATGTTATTGTCAAATTATTCACTTCTGTTCTTAACTTCTGTA  650

seq1  AAGCAAGATTGTTGTGGAAAGAAGGAATTTTGGGGGTATTATTTTATATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGATTGTTGTGGAAAGAAGGAATTTTGGGGGTATTATTTTATATG  700

seq1  TTTTTTGGGTTCTTCATTTTGTTAAAAATATTTACATTCTGAATATCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGGTTCTTCATTTTGTTAAAAATATTTACATTCTGAATATCTAT  750

seq1  TTATATTATTTTTTT--CTTCA-TTTTTGAGAATTTCACAAATGTAT-AT  796
      |||||||||||||||   |||| |||||||||||||||||||||||| ||
seq2  TTATATTATTTTTTTTCTTTCATTTTTTGAGAATTTCACAAATGTATAAT  800

seq1  ACAATGAT-GTACAATTATAT-CTATACTCC--ATTTTTCCCCTCTCACT  842
      |||||||| |||||||||||| |||||||||   ||||||||||||||||
seq2  ACAATGATGGTACAATTATATCCTATACTCCCATTTTTTCCCCTCTCACT  850

seq1  -CCCTTCATATTTCTCCAAAATGTTCCCT-CCCAAATACATGTG-TTTTA  889
       |||||||||||||||||||||||||||| |||||||||||||| |||||
seq2  CCCCTTCATATTTCTCCAAAATGTTCCCTCCCCAAATACATGTGTTTTTA  900

seq1  GTTTT-GGTAACCCACCAAAGTGT-GGAAAACCTACCAGTGG-CCATA-C  935
      ||||| |||| |||||| |||||| ||||||||||||||||| ||||| |
seq2  GTTTTGGGTACCCCACC-AAGTGTGGGAAAACCTACCAGTGGCCCATATC  949

seq1  CTTCCATTAGAACAACCAAAAG-TAAAACAAACAAACAAAAAAACCCACA  984
      || ||||||||||||||||||| |||| ||||| ||| ||||||||||| 
seq2  CTCCCATTAGAACAACCAAAAGTTAAACCAAACCAACCAAAAAACCCACT  999

seq1  TG--ATTCTGTC-TTCCTCAGCAAC-TAACAACTGCTAATATCTCC--TC  1028
      ||   ||||||| ||||||||| || || || ||||||||||||||  ||
seq2  TGGATTTCTGTCTTTCCTCAGCCACTTACCATCTGCTAATATCTCCTTTC  1049

seq1  AGTAAGGAA-TGT-GTGACCTGGAGATTACT-TCTCTTATCTA-TGCC-A  1073
      |||| |||| ||| |||||  ||||||  || ||||||||||| |||| |
seq2  AGTAGGGAATTGTGGTGACTGGGAGATACCTCTCTCTTATCTATTGCCAA  1099

seq1  AAATGTTAGC---TGTCTTGAT-GTTAT  1097
      ||| ||||||   ||||||||| |||||
seq2  AAAGGTTAGCCTGTGTCTTGATGGTTAT  1127


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