BAC Information

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BAC

Clone NameB6Ng01-319E22
ChromosomeX (Build37)
Map Location 77,006,632 - 77,007,688
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667700, EG546337, EG629116, LOC636082, EG667736, LOC100041373, EG636104, 2410003J06Rik, LOC667749
Downstream geneLOC211702, LOC667755, LOC211705, LOC654474, LOC629153, LOC546338, LOC100042229, LOC667776, EG629182
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319E22.bB6Ng01-319E22.g
ACCGA108969GA108970
length1,1941,066
definitionB6Ng01-319E22.b B6Ng01-319E22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagcccaattttaatggggttatttgatttt
ctgaagtccaccttcttgagttttttatatatattggatattagtcctct
atctgatttaggatagtaaagatcctttatcaatctgttggtggcctttt
tgccttattgatagtgtcttttgccttacagaagctttgcagtttcatga
ggtcccatttgtcaattctcaatcatacagcacaagccattgctttttta
ttcaggaatttttaccctgtgccaatatcttcaaggcttttccccacttt
ctcctctatgagtttcagtgtctctggtttaatgtggagctccttgatcc
aattagatttgaccattgacttgtttgagttaattttatatactgctact
tcaccgaagctgtttatcaggtttaggagttctctggtggaatttttagg
gtcacttatatatgctatcatatcatctgcaaaaagtgatattttgactc
ctttttttcaaatttctatcccctttatctccttttgttgtcgaattgct
ctggctaggacttcaagtacaatgttgaataggtagggagaaagtgggaa
gccttgtctattccctgattttagtgggattgcttccaccttctcaccat
atactttgaagttggctactggtttgctgtaaattgcttttatcatgttt
aggtatgggccttgaattcctgatctttccaaggcttttatcatgaatgg
gtgttggattttgtcaaatgatttctccgaatctaacgagatgatcatgt
ggtttttgtctttgagtttgtttatataatagattacattgatggatttt
cgtatattaaaccatccctgcatccctgggaataaaacctacttggtcag
gatggatgattgttttgatgtgttctaggtttcggttagcgagaatatat
tgaggattttgcatcaatattcataaggaattggtctgaagttctctatc
tttgttggattctttctgttgttagtatcagagtagttggtgcttcataa
gaagtgagtttggatagagtacccttctacttctattttgtgaatagtgg
tgcagaatggaatagaatctcttgaatgcctgatagaactctgacactaa
acccatcttggatccagtgagcctactatagtatgagcttgcag

gaattcatttaaacagagagaggggctgcagtcaggtatgggagaggcaa
gtcaatattacttgtgttgttctgtactgaaaatgaagtatgaaataatg
acagtaaatgaattatcaggactttatgaatgtgggcttttgaggataaa
gagtaactgttctctattattctaaagcaaatcattagtagggttgttgt
aaaacatatagcgggagagaaatgagaataaaactacatttgcaaaggac
acattattcatttgaattgatatgttctccatttgatacagtaagtgaga
cacagggctacagatctaggctgggggttataggaaacaaaggaagaatg
tggcattattagccttgtacaacagcagaagtacaatgtatgagaattca
aaatgagaggagagcaggcaattcaaaagaaatcactgaagtatgttata
ttgtggtgttgccagggaagtggtcaaagaagacatcaaagtaccaaggc
caaattacaggaactagaatattcatataagcaaagctgcaaaggatatc
aaccattttatatatatatatatggtgtgtgtgtcataagtatatacatc
ttatgtatattatgtatatatatcataagatatatatatgtattttaaag
tatatatatatatatatatatgtctgtgactttgctttttttttccatat
cgagtaaaaatgttgcatctgttatggttaagtgtttgtttagtggtgat
taagaagtagacacaccacaaatttttttgccatcatcttcaatttctga
cttccctttttattatggttattgcctaaatgtgcttttttaatagtaac
caaatggttgcatactctatcaaattttgattttgtctgaaaatatcttt
atttgaccttcatttatgaaacatagttttcttgttgctctagttgttct
tctatttctgtgaaaaaacacttgaccaaacaacttgagagaaagtgttt
atcttccctacgggttacgtgagccattcttcatttagtaactggtaagg
taccattttactagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_77006632_77007688
seq2: B6Ng01-319E22.g_65_1129

seq1  GAATTCATTTAAACAGAGAGAGGGGCTGCAGTCAGGTATGGGAGAGGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAAACAGAGAGAGGGGCTGCAGTCAGGTATGGGAGAGGCAA  50

seq1  GTCAATATTACTTGTGTTGTTCTGTACTGAAAATGAAGTATGAAATAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATATTACTTGTGTTGTTCTGTACTGAAAATGAAGTATGAAATAATG  100

seq1  ACAGTAAATGAATTATCAGGACTTTATGAATGTGGGCTTTTGAGGATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAATGAATTATCAGGACTTTATGAATGTGGGCTTTTGAGGATAAA  150

seq1  GAGTAACTGTTCTCTATTATTCTAAAGCAAATCATTAGTAGGGTTGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAACTGTTCTCTATTATTCTAAAGCAAATCATTAGTAGGGTTGTTGT  200

seq1  AAAACATATAGCGGGAGAGAAATGAGAATAAAACTACATTTGCAAAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATATAGCGGGAGAGAAATGAGAATAAAACTACATTTGCAAAGGAC  250

seq1  ACATTATTCATTTGAATTGATATGTTCTCCATTTGATACAGTAAGTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATTCATTTGAATTGATATGTTCTCCATTTGATACAGTAAGTGAGA  300

seq1  CACAGGGCTACAGATCTAGGCTGGGGGTTATAGGAAACAAAGGAAGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGCTACAGATCTAGGCTGGGGGTTATAGGAAACAAAGGAAGAATG  350

seq1  TGGCATTATTAGCCTTGTACAACAGCAGAAGTACAATGTATGAGAATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTATTAGCCTTGTACAACAGCAGAAGTACAATGTATGAGAATTCA  400

seq1  AAATGAGAGGAGAGCAGGCAATTCAAAAGAAATCACTGAAGTATGTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGAGGAGAGCAGGCAATTCAAAAGAAATCACTGAAGTATGTTATA  450

seq1  TTGTGGTGTTGCCAGGGAAGTGGTCAAAGAAGACATCAAAGTACCAAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTGTTGCCAGGGAAGTGGTCAAAGAAGACATCAAAGTACCAAGGC  500

seq1  CAAATTACAGGAACTAGAATATTCATATAAGCAAAGCTGCAAAGGATATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTACAGGAACTAGAATATTCATATAAGCAAAGCTGCAAAGGATATC  550

seq1  AACCATTTTATATATATATATATGGTGTGTGTGTCATAAGTATATACATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTTTATATATATATATATGGTGTGTGTGTCATAAGTATATACATC  600

seq1  TTATGTATATTATGTATATATATCATAAGATATATATATGTATTTTAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTATATTATGTATATATATCATAAGATATATATATGTATTTTAAAG  650

seq1  TATATATATATATATATATATGTCTGTGACTTTGC--TTTTTTTCCATAT  698
      |||||||||||||||||||||||||||||||||||  |||||||||||||
seq2  TATATATATATATATATATATGTCTGTGACTTTGCTTTTTTTTTCCATAT  700

seq1  CGAGTAAAAATGTTGCATCTGTTATGGTTAAGTGTTTGTTTAGTGGTGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTAAAAATGTTGCATCTGTTATGGTTAAGTGTTTGTTTAGTGGTGAT  750

seq1  TAAGAAGTAGACACACCACAAATTTTTTTGCCATCATCTTCAATTTCTGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGTAGACACACCACAAATTTTTTTGCCATCATCTTCAATTTCTGA  800

seq1  CTTCCCTTTTTATTATGGTTATTGCCTAAATGTGC-TTTTTAATAGTAA-  846
      ||||||||||||||||||||||||||||||||||| ||||||||||||| 
seq2  CTTCCCTTTTTATTATGGTTATTGCCTAAATGTGCTTTTTTAATAGTAAC  850

seq1  CAAATGGTTGCATACTCTATC-AATTTTGA-TTTGTCTGAAAATATCTTT  894
      ||||||||||||||||||||| |||||||| |||||||||||||||||||
seq2  CAAATGGTTGCATACTCTATCAAATTTTGATTTTGTCTGAAAATATCTTT  900

seq1  ATTTGACCTTCATTTATGAAACATAGTTTTCTTGTTGCTCTAGTTTGTTC  944
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTTGACCTTCATTTATGAAACATAGTTTTCTTGTTGCTCTAG-TTGTTC  949

seq1  -TCTATTTCTGTGAAAAAACAC-TGACCAAAACAACTTGAGGAGAAAAGT  992
       ||||||||||||||||||||| ||||| ||||||||||| ||| |||||
seq2  TTCTATTTCTGTGAAAAAACACTTGACC-AAACAACTTGA-GAG-AAAGT  996

seq1  GTTTATTTTCCCTTACGGGTTACAGTGAG-CATTCTTCA-TTAGTAACT-  1039
      |||||| ||||| |||||||||| ||||| ||||||||| ||||||||| 
seq2  GTTTATCTTCCC-TACGGGTTAC-GTGAGCCATTCTTCATTTAGTAACTG  1044

seq1  GTAA-GTA-CATTTTA-TAGA  1057
      |||| ||| ||||||| ||||
seq2  GTAAGGTACCATTTTACTAGA  1065


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