BAC Information

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BAC

Clone NameB6Ng01-320D20
ChromosomeX (Build37)
Map Location 5,399,496 - 5,400,370
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC670673, LOC100042254, LOC100043934, LOC100042267, LOC100042275, LOC668967, LOC434724, LOC100043935, LOC668968, LOC546182, Mycs, LOC668969, LOC668970, OTTMUSG00000016453, LOC627412
Downstream geneLOC436185, LOC668971, LOC100043936, LOC668972, Nudt11, LOC208428, AU022751, Nudt10, Bmp15, Shroom4, LOC100043937
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320D20.bB6Ng01-320D20.g
ACCGA109660GA109661
length1,1071,061
definitionB6Ng01-320D20.b B6Ng01-320D20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatataaattccataaaaacatttaactggaagctatgatatat
acacaggcaccctggtgcagaaccattcatgccctgtacatgttgtttca
gtttctgtgagttcataagagttttactcatgtttatttagaggactttg
ttttcttggtgttctccatcccctctgactctaatattctttctgcctcc
tcttccctgggttgccctgagctctaaggggagggatttaatagagacat
cccatttaggacttaatattcaaagatgtctcactctccctataatgtct
ggccgtgggtctctgtattgttcccatctgctgcaggaggaagcttctct
gatgatcatcaaagaagtcactatctatgagtatagcagaaaaatcatta
ggagtcattttatcacatttatcacattttatcacatttttctttctttt
tttaaagagcagtacttgttggttttgtataagtcccctgagatatctag
ttgtaggtttttggtcactcaagcagtatcaggtatgggttccatttaat
ttagtgagccttaattgattgtttactcttacaacctttgtaccatcatt
gccccagtatgtactgcggatagtataccattatagctggcttaatgttt
acatttctctttttagggcatgcagagtacattcctataacgaagaagct
ggaacataggagtaaaggctctatgtaggtacccagtcaataactccatt
tttaatgggttgtgtaggtgttttctttaacaatgggcccttgtgctcag
tttttttgagaacattctgtactttttgcaacagcctgaattgtttgggg
attcctatgtgaccccattggccaataactcaattatatataaaccaatc
acatgactggaaacctcatttgatagcaagaaaagtccagttgggacact
gtagtggtttaaataagcttggcccatggaaagtgagatgattagagtgt
gctttgttggagtaggtggaacctgttgagaaattggtcactgcgagcgg
gcttgacgtctcaagaatccaggatcacccaagtatgagagaagcctcct
ctcggct
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggggtccagcttcttgagctctttgtatatattggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggcagcctt
tttgtcttattgaccgtgtcttttgtcttacagaagctttgtaattttat
gaggtcccacttttcaattctcaatcttacagccgaagccattgctgttc
tattcaggaatttttcccctgtgcacatatctttgaggcttttccccact
ttctcctctataagttttactgtctctgattttatgtggagttccttgat
ccacttagatttgaccttagttcaaggagataggaatggatcaattcaca
ttcttctacatgataacaaccgccagttgtgccagcatcatttgttgaaa
atgctgtctttttttccactggatggttttagctcccttgtcaaagatca
agtgaccataggtgtgtgggttcatttctgggtcttcaattctgttctat
tggtctacttgtctgtctctataccagtaccatgcagtttttataacaat
tgctctgtagtacagctttaggtcaggcatggtgattccaccagaggttc
ttttatccttgagaagattttttgctatccaatgcctaatcagggtggga
atgtctttagtatttctccattaacgtgatggatttagaaatattttatt
gagatgatttggtagggtaatttttctacaacttttttgtatctttaatt
gattttaatttcagggaaatgttgtctttgtaagtggaatttggaagtac
tttttctttcttttatgttttaaagaacaattttagagattagtgttgat
tctttattaacgggactagtaaattctgtcatgaatttagacctgaagat
tttattagtggggagatttactactactctgcttatcacatcaagattat
cagatacacttaagatatttaatcccatctgtcagtttacttctgggcag
atcagatacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_5399496_5400370
seq2: B6Ng01-320D20.g_251_1127

seq1  AGCTTTGTAATTTTATGAGGTCCCACTTTTCAATTCTCAATCTTACAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGTAATTTTATGAGGTCCCACTTTTCAATTCTCAATCTTACAGCC  50

seq1  GAAGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTGCACATATCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTGCACATATCTTT  100

seq1  GAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTTACTGTCTCTGATTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTTACTGTCTCTGATTTTA  150

seq1  TGTGGAGTTCCTTGATCCACTTAGATTTGACCTTAGTTCAAGGAGATAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGTTCCTTGATCCACTTAGATTTGACCTTAGTTCAAGGAGATAGG  200

seq1  AATGGATCAATTCACATTCTTCTACATGATAACAACCGCCAGTTGTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATCAATTCACATTCTTCTACATGATAACAACCGCCAGTTGTGCCA  250

seq1  GCATCATTTGTTGAAAATGCTGTCTTTTTTTCCACTGGATGGTTTTAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATTTGTTGAAAATGCTGTCTTTTTTTCCACTGGATGGTTTTAGCT  300

seq1  CCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTC  350

seq1  TTCAATTCTGTTCTATTGGTCTACTTGTCTGTCTCTATACCAGTACCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTCTGTTCTATTGGTCTACTTGTCTGTCTCTATACCAGTACCATG  400

seq1  CAGTTTTTATAACAATTGCTCTGTAGTACAGCTTTAGGTCAGGCATGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTTATAACAATTGCTCTGTAGTACAGCTTTAGGTCAGGCATGGTG  450

seq1  ATTCCACCAGAGGTTCTTTTATCCTTGAGAAGATTTTTTGCTATCCAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACCAGAGGTTCTTTTATCCTTGAGAAGATTTTTTGCTATCCAATG  500

seq1  CCTAATCAGGGTGGGAATGTCTTTAGTATTTCTCCATTAACGTGATGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATCAGGGTGGGAATGTCTTTAGTATTTCTCCATTAACGTGATGGAT  550

seq1  TTAGAAATATTTTATTGAGATGATTTGGTAGGGTAATTTTTCTACAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATATTTTATTGAGATGATTTGGTAGGGTAATTTTTCTACAACTT  600

seq1  TTTTGTATCTTTAATTGATTTTAATTTCAGGGAAATGTTGTCTTTGTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATCTTTAATTGATTTTAATTTCAGGGAAATGTTGTCTTTGTAAG  650

seq1  TGGAATTTGGAAGTACTTTTTCTTTCTTTTATGTTTTAAAGAACAATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTTGGAAGTACTTTTTCTTTCTTTTATGTTTTAAAGAACAATTTT  700

seq1  AGAGATTAGTGTTGATTCTTTATTAA-GGGACTAGTAAAATTCTGTCATG  749
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  AGAGATTAGTGTTGATTCTTTATTAACGGGACTAGT-AAATTCTGTCATG  749

seq1  AATTTAGACCTGAAGATTTTATTAGTGGGGAGATTTACTTATTACTTCTG  799
      |||||||||||||||||||||||||||||||||||||| || ||| ||||
seq2  AATTTAGACCTGAAGATTTTATTAGTGGGGAGATTTAC-TACTAC-TCTG  797

seq1  C-TATCACATCAAGAATTAT-AGATACACTTAAGATATTT-ATCCCATCT  846
      | |||||||||||| ||||| ||||||||||||||||||| |||||||||
seq2  CTTATCACATCAAG-ATTATCAGATACACTTAAGATATTTAATCCCATCT  846

seq1  TTCA-TTTAATT-TTGGCAGATCAGATACAT  875
       ||| |||| || | ||||||||||||||||
seq2  GTCAGTTTACTTCTGGGCAGATCAGATACAT  877