BAC Information

Click to search

BAC

Clone NameB6Ng01-320G03
ChromosomeX (Build37)
Map Location 121,245,191 - 121,246,149
singlet/doubletsinglet
Overlap geneLOC100038940, LOC100038941, EG625699, LOC100038942
Upstream gene3110007F17Rik, LOC100039751, LOC100039763, LOC665281, EG625591, LOC665325, EG382265, LOC665364, EG546368
Downstream geneLOC100039828, EG434843, EG665463, EG665522, LOC100038969, LOC100038978
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320G03.g
ACCGA109764
length961
definitionB6Ng01-320G03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaccttgattctcttccatgggactctcacttttgcacaccacga
agttgagattcctaaatttaaaaaatttatgcaaacaatgaacactgcca
aatacccagtgaatatttctcttactatattggagtggaattattttaat
tgttcaatctctaagaacagcagtaaaatggatcatatgacattcaacaa
cccattggaatggacagcactggacaactatgatatggccatgagtgatg
aaggttacaatttgtataatgctgtttatgctgcggcccacgcctaccat
gaacacattcttcaacgagtaaagtctcagaaaaaggcaaaacccaaaag
atatttcactgcttgacagcaggtaaagtttcttacatttcgttattctt
acatatatcaatgctattttttaaatggaaccagagaaacaactgtacat
ttggtagagattattctcccagtgaaatgatttctatactgcaaaagtcc
ctaatgattcctttacatggataaatatcatgtacaaagataatatttca
taggagacaatacaattttatgaataccagtgagtgtgttgaaaaggtgt
ctcaacgtttcaccaaatgagttcaaaattaaaataggagccaagagttt
tgtcataaaagtcttaagtgattacaagagtgaatatttttctaaaatat
agtgtctcaaaaattgatacatcagctgtggttaagaggtatatatttaa
attaacaatttacaaagacataaatgattaatacttcccattttattaag
tttatgttcatcttatatgtgtacactgtatgtacataaaatcccacatt
ttttattttcacaattttcagtcattcagacttcccccgcattctcagat
acatggcttacctttttttaaagttaattttgacaaacatgtttacacag
cgcgcgcacac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_121245191_121246149
seq2: B6Ng01-320G03.g_62_1022 (reverse)

seq1  GTGTGTGCGCGC-CTGTGTAAACATGTTTGTCAAAAATAATTTTAAAAAA  49
        |||||||||| ||||||||||||||||||||||| ||| |||||||||
seq2  --GTGTGCGCGCGCTGTGTAAACATGTTTGTCAAAATTAACTTTAAAAAA  48

seq1  --GGAAGCCATGTATGTGAGAATGAGGGGGAAGTCTGAATGACTGAAAAT  97
        | ||||||||||| |||||||| |||||||||||||||||||||||||
seq2  AGGTAAGCCATGTATCTGAGAATGCGGGGGAAGTCTGAATGACTGAAAAT  98

seq1  TGTGAAAAT-AAAAATGTGGGATTTTATGTACATACAGTGTACACATATA  146
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAATAAAAAATGTGGGATTTTATGTACATACAGTGTACACATATA  148

seq1  AGATGAACATAAACTTAATAAAATGGGAAGTATTAATCATTTATGTTTTT  196
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGATGAACATAAACTTAATAAAATGGGAAGTATTAATCATTTATGTCTTT  198

seq1  GTAAATTGTTAATTTAAATATATAACTATTAACCACAGCTGATGTATCAA  246
      |||||||||||||||||||||||| || ||||||||||||||||||||||
seq2  GTAAATTGTTAATTTAAATATATACCTCTTAACCACAGCTGATGTATCAA  248

seq1  TTTTTGAGACACTATATTTTAGAAAAATATTCACTCTTGTAATCACTTAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGACACTATATTTTAGAAAAATATTCACTCTTGTAATCACTTAA  298

seq1  GACTTTTATGATAAAACTCTTGGCTCCTATTTTAATTTTGAACTCATTTG  346
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTATGACAAAACTCTTGGCTCCTATTTTAATTTTGAACTCATTTG  348

seq1  GTGAAATGTTGAGACACCTTTTCAAAAAACTCACTGGTATTCATAAAATT  396
      |||||| |||||||||||||||||| | ||||||||||||||||||||||
seq2  GTGAAACGTTGAGACACCTTTTCAACACACTCACTGGTATTCATAAAATT  398

seq1  GTATTGTCTCCTATGAAATATTATCTTTGTACATGATATTTATCCATGTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTCTCCTATGAAATATTATCTTTGTACATGATATTTATCCATGTA  448

seq1  AAGGAATCATTAGGGACTTTTGCAGTATAGAAATCATTTCACTGGGAGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATCATTAGGGACTTTTGCAGTATAGAAATCATTTCACTGGGAGAA  498

seq1  TAATCTCTAACAAATGTACAGTTGTTTCTCTGGTTCCATTTAAAAAATAG  546
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTCTACCAAATGTACAGTTGTTTCTCTGGTTCCATTTAAAAAATAG  548

seq1  CATTGATATATCTAAGAATAATGAAATGTAAGAAACTTTACCTGCTGACA  596
      ||||||||||| ||||||||| ||||||||||||||||||||||||| ||
seq2  CATTGATATATGTAAGAATAACGAAATGTAAGAAACTTTACCTGCTGTCA  598

seq1  AGCAGTGAAATATCTTTTGGGTTTTGCCTTTTTCTGAGACTCTACTTGTT  646
      ||||||||||||||||||||||||||||||||||||||||| |||| |||
seq2  AGCAGTGAAATATCTTTTGGGTTTTGCCTTTTTCTGAGACTTTACTCGTT  648

seq1  GAAGAATGTGTTCATGGTAGGTGTGGGCCGCAGCATAAACAGCATTATAC  696
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAAGAATGTGTTCATGGTAGGCGTGGGCCGCAGCATAAACAGCATTATAC  698

seq1  AAATTGTAACCTTCATCACTCATGGCCATATCATAGTTGTGCAGTGCTGT  746
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAATTGTAACCTTCATCACTCATGGCCATATCATAGTTGTCCAGTGCTGT  748

seq1  CCATTCCAATGTGTTGTTGAATGTCATATGATCCATTTTACTGCTGTTCT  796
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCAATGGGTTGTTGAATGTCATATGATCCATTTTACTGCTGTTCT  798

seq1  TAGAGATTGAACAATTAAAATAATTCCACTCCAATATAGTATGAGAAATA  846
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAGAGATTGAACAATTAAAATAATTCCACTCCAATATAGTAAGAGAAATA  848

seq1  TCTACTGGGTATTTGGCAGTGTTCATTGTTTGCATAAATTTTTTAAATTT  896
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGGGTATTTGGCAGTGTTCATTGTTTGCATAAATTTTTTAAATTT  898

seq1  AGGAATCTCAACTTTGTGGTGTGCAAAAGTGATAGTGCCATGGAAGAGAT  946
      |||||||||||||| ||||||||||||||||| ||| |||||||||||| 
seq2  AGGAATCTCAACTTCGTGGTGTGCAAAAGTGAGAGTCCCATGGAAGAGAA  948

seq1  TAAAGGTGAATTC  959
      | |||||||||||
seq2  TCAAGGTGAATTC  961