BAC Information

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BAC

Clone NameB6Ng01-321M02
ChromosomeX (Build37)
Map Location 116,433,093 - 116,434,223
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039551, Tgifx1, LOC665087
Downstream geneLOC385417, Pabpc5, LOC236983, LOC674318, EG545741, LOC100039461, Pcdh11x, H2afb3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321M02.bB6Ng01-321M02.g
ACCGA110779GA110780
length9941,114
definitionB6Ng01-321M02.b B6Ng01-321M02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaataaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagttcaaaaattcaggtgacagc
tgatgctgtcgaggatgtggagaaagaggatcactcctccattgttgctg
ggattgcaagcttgtacaaccactctggaaatcagtctggtgactcctca
gaaaactggacatagtactactggaggatcctgcaatacctctcctgggc
atatatccagtagatgttccaacaggaattaagaacacatgctccattat
tttcacagcagccttatttataatagccagaagttggaaagaacccagat
gcccctcaacagaggaatggatacagaaactgtggtacatttacacaatg
gagtactactcagctattaaaaagaatggatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
tgaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggataccctaggtttaagatataagatacaatttgctaaacacatgaa
actcaagaagaatgaagactgaagtttggacactatgcccctccttagaa
ttgggttttacattttcttatatcagtgtatcagtttctcaatgtgatct
tctacacctgagattatttattccataccttgtaatctgtttgtgatact
tgcacctgtttctgttctctttcctaggttttctaactccaggatagcct
cagtttgtgttttctttattgctcctattttaaatttcagttcttggact
gttttattcacttctggcatctgtttgattgtattttcctctatttctta
tggcatttattcatttttcttctttgaaaggaatctgtaatgct

gaattcctgattgcctagtagagaggtttttactgtaagattatatttca
atgtatccttctgcatttctggtaaagatggaagagtttacactgccaaa
ttatttgatattattataaattatctatgcacatattatgtacagattaa
aattaataaatgattataggtttatttttgaacatgctcctgtctggaag
tataaaggagtatcattaatagtgttagggattggggcttgcacatgggt
taggtctcaagttaggctggttataagctagccattcccttagtccctgt
tccatccctggtgcctacatttctcatagaaaggataaaatttgtgatta
ttgttttgggagtgggttggtgtctctatcgcttctctggggttcttgcc
tggccactagatattgcataaccacgatatagtgagttacggttaaggtc
attcccattgattcttggttgtctcacttatttaaggtctctgtcttgtc
ttggaaatgctcctcacctcctcactcccatttttcagttcttatcatat
attgtttcttggtcttatgatgaatgggtataaactcagatttgtagata
aaattttattcatatatagcaagttatttcctctagtaactcaaaataaa
tgaattaaatcaaggaagatggaaggaaggaaagaagatagtgctatatt
tagtctttggatatgataacaaaaaaaaaaaaaaaaaaagaccagtcgtg
tactaattatcacaaaattaaaagctgttgtcaagtcctcaattttggag
ggcaagattcctgtttatacactatgacactgcatcagaccagagaattc
cctctttattatgactaccctgtggcttataaatgaataaaacttgcagc
agccacatgatgttaaattcatagaactatcatcatcaaacattctctat
gtgacttcagggtgtttgtgatatatatcttccacaatgtcactgctttc
ctgaaattagcagacataaaaatattatatcttatttcaagtacctctca
tttatcatttagatcataaaactgaagtatagaagaacagtttaatatta
catatcaatgactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_116433093_116434223
seq2: B6Ng01-321M02.g_66_1179

seq1  GAATTCCTGATTGCCTAGTAGAGAGGTTTTTACTGTAAGATTATATTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATTGCCTAGTAGAGAGGTTTTTACTGTAAGATTATATTTCA  50

seq1  ATGTATCCTTCTGCATTTCTGGTAAAGATGGAAGAGTTTACACTGCCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCCTTCTGCATTTCTGGTAAAGATGGAAGAGTTTACACTGCCAAA  100

seq1  TTATTTGATATTATTATAAATTATCTATGCACATATTATGTACAGATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGATATTATTATAAATTATCTATGCACATATTATGTACAGATTAA  150

seq1  AATTAATAAATGATTATAGGTTTATTTTTGAACATGCTCCTGTCTGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATAAATGATTATAGGTTTATTTTTGAACATGCTCCTGTCTGGAAG  200

seq1  TATAAAGGAGTATCATTAATAGTGTTAGGGATTGGGGCTTGCACATGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGGAGTATCATTAATAGTGTTAGGGATTGGGGCTTGCACATGGGT  250

seq1  TAGGTCTCAAGTTAGGCTGGTTATAAGCTAGCCATTCCCTTAGTCCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTCAAGTTAGGCTGGTTATAAGCTAGCCATTCCCTTAGTCCCTGT  300

seq1  TCCATCCCTGGTGCCTACATTTCTCATAGAAAGGATAAAATTTGTGATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCCTGGTGCCTACATTTCTCATAGAAAGGATAAAATTTGTGATTA  350

seq1  TTGTTTTGGGAGTGGGTTGGTGTCTCTATCGCTTCTCTGGGGTTCTTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGGGAGTGGGTTGGTGTCTCTATCGCTTCTCTGGGGTTCTTGCC  400

seq1  TGGCCACTAGATATTGCATAACCACGATATAGTGAGTTACGGTTAAGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACTAGATATTGCATAACCACGATATAGTGAGTTACGGTTAAGGTC  450

seq1  ATTCCCATTGATTCTTGGTTGTCTCACTTATTTAAGGTCTCTGTCTTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCATTGATTCTTGGTTGTCTCACTTATTTAAGGTCTCTGTCTTGTC  500

seq1  TTGGAAATGCTCCTCACCTCCTCACTCCCATTTTTCAGTTCTTATCATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAATGCTCCTCACCTCCTCACTCCCATTTTTCAGTTCTTATCATAT  550

seq1  ATTGTTTCTTGGTCTTATGATGAATGGGTATAAACTCAGATTTGTAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTCTTGGTCTTATGATGAATGGGTATAAACTCAGATTTGTAGATA  600

seq1  AAATTTTATTCATATATAGCAAGTTATTTCCTCTAGTAACTCAAAATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTATTCATATATAGCAAGTTATTTCCTCTAGTAACTCAAAATAAA  650

seq1  TGAATTAAATCAAGGAAGATGGAAGGAAGGAAAGAAGATAGTGCTATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAAATCAAGGAAGATGGAAGGAAGGAAAGAAGATAGTGCTATATT  700

seq1  TAGTCTTTGGATATGATAACAAAAAAAAAAAAAAAAAAAGACCAGTCGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTTGGATATGATAACAAAAAAAAAAAAAAAAAAAGACCAGTCGTG  750

seq1  TACTAATTATCACAAAATTAAAAGCTGTTGTCAAGTCCTCAATTTTGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATTATCACAAAATTAAAAGCTGTTGTCAAGTCCTCAATTTTGGAG  800

seq1  GGCAAGATTCCTG-TTATACACTATGACACTGCATCAGGACCAGAGAATT  849
      ||||||||||||| ||||||||||||||||||||||| ||||||||||||
seq2  GGCAAGATTCCTGTTTATACACTATGACACTGCATCA-GACCAGAGAATT  849

seq1  CCCTCTTTATTATGACTACCCTGTGGCTTATAAATGAATAAAACTTGCAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTTATTATGACTACCCTGTGGCTTATAAATGAATAAAACTTGCAG  899

seq1  CAG-CACATGATGTTTAAATTCATAGAACTATCATCATCAAACATTCTCT  948
      ||| ||||||||| ||||||||||||||||||||||||||||||||||| 
seq2  CAGCCACATGATG-TTAAATTCATAGAACTATCATCATCAAACATTCTC-  947

seq1  TATGTGACTTCA-GGTGTTTGTGATTATATTATCTTCCACAATGTCACTG  997
      |||||||||||| ||||||||||| |||| ||||||||||||||||||||
seq2  TATGTGACTTCAGGGTGTTTGTGA-TATA-TATCTTCCACAATGTCACTG  995

seq1  CTTTCCTGAAAATTTAGCAGACATTAAAAATTAATTATAATCTTATTTCA  1047
      |||||||||||  |||||||||| |||||||  ||||| |||||||||||
seq2  CTTTCCTGAAA--TTAGCAGACA-TAAAAAT--ATTAT-ATCTTATTTCA  1039

seq1  AGTACCTCTTCATTTTTATCAATTTAGAATCATAAAAACATGAGAGTAAT  1097
      |||||||| |||  |||||| |||||| |||||||||   ||| ||| ||
seq2  AGTACCTC-TCA--TTTATC-ATTTAG-ATCATAAAA--CTGA-AGT-AT  1080

seq1  AGAAGAACAGTTTAATATTACATATCAATGACTG  1131
      ||||||||||||||||||||||||||||||||||
seq2  AGAAGAACAGTTTAATATTACATATCAATGACTG  1114


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