BAC Information

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BAC

Clone NameB6Ng01-324A17
ChromosomeX (Build37)
Map Location 113,748,194 - 113,749,312
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039277, Cpxcr1
Downstream geneEG624153, LOC100039300, EG665045, LOC100039319, LOC624284
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324A17.bB6Ng01-324A17.g
ACCGA112463GA112464
length1,2001,106
definitionB6Ng01-324A17.b B6Ng01-324A17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaactcttcagctggggaacagggtacccgtaagtatagcttt
acaaggtaagtctgatcttgaactttctaacgaaattcaagacagtctat
cagaagtaaagtggggaatagctttacaaggtacgtctggccttgaactt
tctaacgaaattcaagacagtctatcagaagtaaagtgggaaatagcttt
acaaggtatgtttggccttgaactttttctagtgttaggagcccttttgt
tccttttcacatgttatcaagtggttaaggcagggctgaaaattctggat
gaaattcagggcaatctatcagaagtaaatcggggagagagagtaggagc
aaagaggaaatatggtacacaaaataagtatacaggcctttccacgggtc
ttgaacctgaggaaaagtttaggtcaggtaagaatacctggggagagatt
ggaaggaaggagaaggaaaaagaaaagaaaaaagatcaatcagcggaggc
ttctaggagaaggagcctatactcatcactagatgagctcaaggagccag
ttcttagtagttctgaatcagatgaaaaggctattagggcctggaaggcg
ctctcccgagcaggtgaggccactggacaactaacaaagatcgtccagag
acctcaggattcattctcagattttgtggccagaatgacagaggcagcag
agcatatttttgcagattcagagcaagctgcacctctggtagaacagctc
atttatgagcaagccacacaggaatgcagagcggccatagccccaagaaa
gaacaaaggcttacaagactggctcagggtttgtcgggagcttgggggac
ctctcaccaatgcaggcttagcggccgccatcctccaatcctaaaaatgc
tccatgggcagaaattaatcaacgcatagatcttgtccaggaacaactag
atgtattatggcaaataactcagctgggatgtgaataaaagtttccggga
tgtccgttaatttactagggcagctatttgtcaaaagtctttcctcagta
atatgttacagaatggacgcctgaattggaacagaccctttcggaatgag
aatgcaattattcagttcaacttccacgtgctgactgttcctgaccaaga
tacgattggatcctctcagcagttcgtctagaatgggtggcaatgcatca


gaattccagatagatcattgttagtatatttaaaatacagtacatttttg
gaaaaggtttctaggcaacaaacattacaatactaggtaaaaaattaacc
ttaaggtatgacaacttagaaacacatttacaaaggtctctctctgacca
tgaatgtgggtcctagagttaaaaggcctagaatctactatggtcactgg
tagcatagagatagcaggctatacaatacatgtggtatctcctctaaggt
tcagcaatgatcaagtgaaagaagtgtctgggatattcattctgggaatt
gggtgaggtctgcctccacagagagcaaacaggtcaccaggttgttagca
aaatcaacttttaggcttctgggcagaaaaacagatattttatctcctct
attgagaaatggctcctttgtgtttaacatttctggtttccctagtgatt
tgtaggcgcaaggacctttgtgcccccaacagaaaactactggatgtatt
tttattactttgtcaactgtatttgtttctgtgttatatttatacacttt
tatttgaacagtgtgatatgttttgaagagactgtgtaattctatatcag
tattatcttcttctagcaagcatttaagtatttgaagatagtcttaattt
aattggaaattaaatttagtccaatttgcattttatgatcatgtggatgc
attaactaacataacttttctggaatagttcgaataaataaattatctat
acttggaaaaatcttcaatctgttcactatggatagaaccatattagcaa
atcatagttaattccttataaaattttgattctaagcacaatggcaacat
taaaatgactattagtgatgcaatcaaaattcctgacatctgtagcagtg
ggccaatcctggaatcttagtaatcatataacaaagttaaaccctctgaa
gaggggaccccatttcacaatgagaagccaggtcaaagtagcaaccatgg
ggctgtacagagaaatacatgttggattatgatacattttttttcagatg
gacaaacagctaaacagaatgttacttatatattctgcagaatagtgtgt
cttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_113748194_113749312
seq2: B6Ng01-324A17.g_65_1170 (reverse)

seq1  AAAAAGACACAACTATTCTGCAG-ATATATAGTTAAACAATCCTTGTTTT  49
      |||||||||| |||||||||||| |||||||  | |||| ||  || |||
seq2  AAAAAGACAC-ACTATTCTGCAGAATATATAAGT-AACATTC--TG-TTT  45

seq1  AGCTGTTTGTCCATCTGGAAAAAAATTGTTATCCAATAATCCAAACATGT  99
      ||||||||||||||||| ||||||||   ||||  ||||||| |||||||
seq2  AGCTGTTTGTCCATCTGAAAAAAAAT--GTATC--ATAATCC-AACATGT  90

seq1  AATTTCCTCTGGTACAGGCCCCATGGTTGCTACTTTGACCTGGCTTCTCA  149
      |  || |||| ||||| |||||||||||||||||||||||||||||||||
seq2  A--TTTCTCT-GTACA-GCCCCATGGTTGCTACTTTGACCTGGCTTCTCA  136

seq1  TTGTGAAATGGGGTCCCCTCTTCAGAGGGTTTAACTTTGTTATATGATTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAATGGGGTCCCCTCTTCAGAGGGTTTAACTTTGTTATATGATTA  186

seq1  CTAAGATTCCAGGATTGGCCCACTGCTACAGATGTCAGGAATTTTGATTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATTCCAGGATTGGCCCACTGCTACAGATGTCAGGAATTTTGATTG  236

seq1  CATCACTAATAGTCATTTTAATGTTGCCATTGTGCTTAGAATCAAAATTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTAATAGTCATTTTAATGTTGCCATTGTGCTTAGAATCAAAATTT  286

seq1  TATAAGGAATTAACTATGATTTGCTAATATGGTTCTATCCATAGTGAACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGAATTAACTATGATTTGCTAATATGGTTCTATCCATAGTGAACA  336

seq1  GATTGAAGATTTTTCCAAGTATAGATAATTTATTTATTCGAACTATTCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAAGATTTTTCCAAGTATAGATAATTTATTTATTCGAACTATTCCA  386

seq1  GAAAAGTTATGTTAGTTAATGCATCCACATGATCATAAAATGCAAATTGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTTATGTTAGTTAATGCATCCACATGATCATAAAATGCAAATTGG  436

seq1  ACTAAATTTAATTTCCAATTAAATTAAGACTATCTTCAAATACTTAAATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATTTAATTTCCAATTAAATTAAGACTATCTTCAAATACTTAAATG  486

seq1  CTTGCTAGAAGAAGATAATACTGATATAGAATTACACAGTCTCTTCAAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTAGAAGAAGATAATACTGATATAGAATTACACAGTCTCTTCAAAA  536

seq1  CATATCACACTGTTCAAATAAAAGTGTATAAATATAACACAGAAACAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCACACTGTTCAAATAAAAGTGTATAAATATAACACAGAAACAAAT  586

seq1  ACAGTTGACAAAGTAATAAAAATACATCCAGTAGTTTTCTGTTGGGGGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGACAAAGTAATAAAAATACATCCAGTAGTTTTCTGTTGGGGGCA  636

seq1  CAAAGGTCCTTGCGCCTACAAATCACTAGGGAAACCAGAAATGTTAAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTCCTTGCGCCTACAAATCACTAGGGAAACCAGAAATGTTAAACA  686

seq1  CAAAGGAGCCATTTCTCAATAGAGGAGATAAAATATCTGTTTTTCTGCCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAGCCATTTCTCAATAGAGGAGATAAAATATCTGTTTTTCTGCCC  736

seq1  AGAAGCCTAAAAGTTGATTTTGCTAACAACCTGGTGACCTGTTTGCTCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCTAAAAGTTGATTTTGCTAACAACCTGGTGACCTGTTTGCTCTC  786

seq1  TGTGGAGGCAGACCTCACCCAATTCCCAGAATGAATATCCCAGACACTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGGCAGACCTCACCCAATTCCCAGAATGAATATCCCAGACACTTC  836

seq1  TTTCACTTGATCATTGCTGAACCTTAGAGGAGATACCACATGTATTGTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTGATCATTGCTGAACCTTAGAGGAGATACCACATGTATTGTAT  886

seq1  AGCCTGCTATCTCTATGCTACCAGTGACCATAGTAGATTCTAGGCCTTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCTATCTCTATGCTACCAGTGACCATAGTAGATTCTAGGCCTTTT  936

seq1  AACTCTAGGACCCACATTCATGGTCAGAGAGAGACCTTTGTAAATGTGTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAGGACCCACATTCATGGTCAGAGAGAGACCTTTGTAAATGTGTT  986

seq1  TCTAAGTTGTCATACCTTAAGGTTAATTTTTTACCTAGTATTGTAATGTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTTGTCATACCTTAAGGTTAATTTTTTACCTAGTATTGTAATGTT  1036

seq1  TGTTGCCTAGAAACCTTTTCCAAAAATGTACTGTATTTTAAATATACTAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCTAGAAACCTTTTCCAAAAATGTACTGTATTTTAAATATACTAA  1086

seq1  CAATGATCTATCTGGAATTC  1119
      ||||||||||||||||||||
seq2  CAATGATCTATCTGGAATTC  1106


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