BAC Information

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BAC

Clone NameB6Ng01-324C01
ChromosomeX (Build37)
Map Location 161,347,943 - 161,349,080
singlet/doubletsinglet
Overlap genenone
Upstream geneAp1s2, Zrsr2, Car5b, Siah1b, Tmem27, Ace2, Bmx, Pir, Figf, Piga, Asb11, Asb9
Downstream geneMospd2, Fancb, LOC627045, Glra2, LOC100040753
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324C01.bB6Ng01-324C01.g
ACCGA112525GA112526
length1,1161,182
definitionB6Ng01-324C01.b B6Ng01-324C01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
atctttccaggttgaggagaaaaataattgggcagtgaataatgttgaaa
ttggcaagaaaaaaaaaaccccacaaatctatgttgaatagtctacagat
agcttagaactcttgggtggtgagatggctcaataggtaaaaatctgagt
tcaatcctcagaacctacatttaaaaatcaggcatgatgaatcattactt
gaactctttcccaggggaagacataggcaatgtctactggtctttctctt
ctcctaaacttccaatggcaaaccgccaaaagcaaactgggtcatgattc
tgccaatgtttattctgaggaagcaatgaatttattggacttcaatacag
agcataggtgaagggtgttggtgctccttttgcaacaggctgtagcatct
gaaaagtcttacccagcagggctggaggccacatagagaactcccacttc
cccgatttttcccaagcccatagctcatccttggagtccatgtacaatta
aggcagagttgcatccaatcagtagtaaggaacagctggatactcaggtg
agggtcttctgacactccccacccctctgtgggggttacaaactgtcaac
aagcccaattgggacactgatggcaattgcttgcctgagacaagctgcct
gcatatgtaatttcagtgatgaggacacagttccaggtagactcctgtgg
ctcattggcctgccagcctcaccttaattgacaagctccaggtcaatgag
aaaccctgtctaaaaataatgtagatgactcctgagtaacaattttctcc
atgtacccaaataagtttatccatacccacacataatcatatacatatac
acacacaaagagctacctttattagtattactttttattgttgttgctat
cattgaaacaaagacttacactgtagctcaagttgccctggaatgtacta
tgtagaccaggctggcctcaaacttaatggtaatcttccttttctctgct
ttcagaattctaggataacaggtgttagccattatgcctggctttgggtc
tatcttaaagtctctatgacaattcatcaataggtctctactacacgcat
tttttttctttggaat
gaattctcacctgagaaataccgtatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatagctaagatcaaaaattcaggtgacag
cagatgctggcatggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctc
agaaaattggacatagtactaccggaggatccagcaatacctctcttggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggtgtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatgggtggacctggagggcatcatcctgagtgaggtaacacattcacaa
aggaactcacacaatatgtactcactgataagtggatattagcccaaaac
ctaggatacccaagatttaagatacaatttgctaaacacatgaaactcaa
gaaaaatgaagactgaagtgtggacactatgcccctccttagaagtggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgataccattgcatacactagcaagattttatcgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaattggatgctcacagtcagctaatggatggatcacagggctccc
aatggaggagctagagacgtacccaggagctaaagggatctgcaccctat
agtggacacatatgactaccagtacccgagctcttgactctagctgcata
tgtatcaaaaagatgctagttcgcaatcactggaaagagagtccaatgac
atgcaaactttaattgcccagtctggtatcgcaagccaaaggggattggg
ttggtccatgggaacgtctccgtacgttatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_161347943_161349080
seq2: B6Ng01-324C01.b_57_1172 (reverse)

seq1  ATTCCAAATGTTTTATCTGATTCAAAAAAAAAAAAAAGCGTGTTAGGTAA  50
                         |||| ||| |||||||| ||||| |||   |
seq2  -------------------ATTCCAAAGAAAAAAAATGCGTG-TAG--TA  28

seq1  GAGACCTATTGATGAA-TGTCATTAAGAGGACTTAAAGATAGACCAAAAG  99
      |||||||||||||||| ||||||  ||| ||||| |||||||||| ||||
seq2  GAGACCTATTGATGAATTGTCAT--AGA-GACTTTAAGATAGACCCAAAG  75

seq1  CCAGGCATAATGGCTAACACCTGTTATCCTAGAATTCTGGAAGCAGAG-A  148
      ||||||||||||||||||||||||||||||||||||||| |||||||| |
seq2  CCAGGCATAATGGCTAACACCTGTTATCCTAGAATTCTGAAAGCAGAGAA  125

seq1  AAGGAAGATTACCA-TAAGTTTGAGGCCAGCCTGGTCTACATAGTACATT  197
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAGGAAGATTACCATTAAGTTTGAGGCCAGCCTGGTCTACATAGTACATT  175

seq1  CCAGGGCAACTTGAGCTACAGTGTAAGTCTTTGTTTCAATGATAGCAACA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCAACTTGAGCTACAGTGTAAGTCTTTGTTTCAATGATAGCAACA  225

seq1  ACAATAAAAAGTAATACTAATAAAGGTAGCTCTTTGTGTGTGTATATGTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAAAAGTAATACTAATAAAGGTAGCTCTTTGTGTGTGTATATGTA  275

seq1  TATGATTATGTGTGGGTATGGATAAACTTATTTGGGTACATGGAGAAAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTATGTGTGGGTATGGATAAACTTATTTGGGTACATGGAGAAAAT  325

seq1  TGTTACTCAGGAGTCATCTACATTATTTTTAGACAGGGTTTCTCATTGAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTCAGGAGTCATCTACATTATTTTTAGACAGGGTTTCTCATTGAC  375

seq1  CTGGAGCTTGTCAATTAAGGTGAGGCTGGCAGGCCAATGAGCCACAGGAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCTTGTCAATTAAGGTGAGGCTGGCAGGCCAATGAGCCACAGGAG  425

seq1  TCTACCTGGAACTGTGTCCTCATCACTGAAATTACATATGCAGGCAGCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTGGAACTGTGTCCTCATCACTGAAATTACATATGCAGGCAGCTT  475

seq1  GTCTCAGGCAAGCAATTGCCATCAGTGTCCCAATTGGGCTTGTTGACAGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGGCAAGCAATTGCCATCAGTGTCCCAATTGGGCTTGTTGACAGT  525

seq1  TTGTAACCCCCACAGAGGGGTGGGGAGTGTCAGAAGACCCTCACCTGAGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACCCCCACAGAGGGGTGGGGAGTGTCAGAAGACCCTCACCTGAGT  575

seq1  ATCCAGCTGTTCCTTACTACTGATTGGATGCAACTCTGCCTTAATTGTAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCTGTTCCTTACTACTGATTGGATGCAACTCTGCCTTAATTGTAC  625

seq1  ATGGACTCCAAGGATGAGCTATGGGCTTGGGAAAAATCGGGGAAGTGGGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTCCAAGGATGAGCTATGGGCTTGGGAAAAATCGGGGAAGTGGGA  675

seq1  GTTCTCTATGTGGCCTCCAGCCCTGCTGGGTAAGACTTTTCAGATGCTAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTATGTGGCCTCCAGCCCTGCTGGGTAAGACTTTTCAGATGCTAC  725

seq1  AGCCTGTTGCAAAAGGAGCACCAACACCCTTCACCTATGCTCTGTATTGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTTGCAAAAGGAGCACCAACACCCTTCACCTATGCTCTGTATTGA  775

seq1  AGTCCAATAAATTCATTGCTTCCTCAGAATAAACATTGGCAGAATCATGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAATAAATTCATTGCTTCCTCAGAATAAACATTGGCAGAATCATGA  825

seq1  CCCAGTTTGCTTTTGGCGGTTTGCCATTGGAAGTTTAGGAGAAGAGAAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTTGCTTTTGGCGGTTTGCCATTGGAAGTTTAGGAGAAGAGAAAG  875

seq1  ACCAGTAGACATTGCCTATGTCTTCCCCTGGGAAAGAGTTCAAGTAATGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTAGACATTGCCTATGTCTTCCCCTGGGAAAGAGTTCAAGTAATGA  925

seq1  TTCATCATGCCTGATTTTTAAATGTAGGTTCTGAGGATTGAACTCAGATT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCATGCCTGATTTTTAAATGTAGGTTCTGAGGATTGAACTCAGATT  975

seq1  TTTACCTATTGAGCCATCTCACCACCCAAGAGTTCTAAGCTATCTGTAGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTATTGAGCCATCTCACCACCCAAGAGTTCTAAGCTATCTGTAGA  1025

seq1  CTATTCAACATAGATTTGTGGGGTTTTTTTTTTCTTGCCAATTTCAACAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAACATAGATTTGTGGGGTTTTTTTTTTCTTGCCAATTTCAACAT  1075

seq1  TATTCACTGCCCAATTATTTTTCTCCTCAACCTGGAAAGAT  1138
      |||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACTGCCCAATTATTTTTCTCCTCAACCTGGAAAGAT  1116