BAC Information

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BAC

Clone NameB6Ng01-327E06
ChromosomeX (Build37)
Map Location 60,068,369 - 60,069,457
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627299, LOC666654, LOC385367, LOC671741, 4933402E13Rik, 4931400O07Rik, 1700019B21Rik, LOC671878, LOC666695
Downstream geneEG627420
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327E06.bB6Ng01-327E06.g
ACCGA114861GA114862
length1,1861,082
definitionB6Ng01-327E06.b B6Ng01-327E06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaatgcctaatggctgagaagcacctgaaaaaatg
ttcatcatccttaaatcatcagggaaatgtaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctgagataaaaaattcaggtgacag
cagatgctggcgaggaacacttctccattgttggtgggattgcaaacttg
tacaaccactctggaaatcagtctggcagttcttcagaaaactggacata
gtattactgaattatcctgcaatatgtctcctgggcatatacccagaaga
tgttcttattggtaatgaggacacatgctccactattttccttgcagcat
tatttataatagccagaaactgaaaagatcccagatgcccctcaacagag
gaatggatacagaaaatgtggtacatttacacaatggagtactactcagt
tattaaaaagaatgaatttatgaaattcctaggtatcctgagcttttgtc
cccgccagcaagaacacactcaggacaaccggaatcttctgcagcaaaac
ttttattgcttacttatcaggagggaagacctggaaccgggaaaatggcg
ctgcttatatagcctgcagcgtgacgtttcagcacctgttgtggtgtgac
agcttctgattcattgctcaccaatcaccccattactatgctgtgagatg
ggcagtgagtaggcgtgagttcacttttgcacttgcgcataaggcttgtt
tactagttaggtgcagtggaagccagcgccatcttataatggtgattgct
catggcacgcacctgattgctcgcagcaaggctctccacacagttgcctg
aaagtcagtcttccactagcagcctgataatggactgaacctctgaaact
gtaagctagccccaattaaattttgtggttttttaataagacttgccttg
gtcatggtatctgttcacagcagtaataccctaactaagacagaagttgg
taccaggagtggggttttgtgtgataggcctgacatgcttttatttgaag
aatgtgatttttgtactttgggattgggactcagtgcatcttaatgggga
ttatggtcattaagtagtatgtggaaagacttgtgcctgggagtaattga
ctggtttggaaccatggccaagtaaaatttctagag

gaattctgatatggaactggaaacttatgaaaatgaatcataatcggggc
cacttacctgcctctgagcaatatgttctgacttaataagggtctttttt
ttttatcagtcttcaagatgctttaagataataaattctgtaacgttgtc
actggaatgtgacgatagtctctttgcaaaaggttacacatttacatgtt
agagttaatatgtagctatataattggaagaaaagcccacagattttaat
caaatcccaagagagtttattataattatatttaattcatcaaatgacaa
gaaatttaataaagaatggaacctagttcatttcatgaatagagaaagat
tctcatcagtctaggttttacatttttcttttctcattttaagtttcaaa
tagaaaaaaaaaaatgtctcctgcaaattaatagatctgacctgagatcc
actgtgaagcaagagtttttaggacattttttagtttgccctacttaagc
aatctacagttcatttaaagcaacaatgacaaaagattcttcagagttat
tttacaaagttgcaatgttttgttttgttttgtttttttaggggagatga
agcatagagatctcataaagattttcattacaatcaaagttcaaaattaa
gttggcacaatgaggaaaatgttgagcacatagtaatgaattctaattca
taacacaagtagtactttctaaaactaggcctattcaacttcttttaaaa
ctcccacattatcatggaatactttggtttctccatctatgttaattgag
agtttggctggatatggtagcctgggctggaatttgtgttctcttagtgt
ctgtataacatctgtccaggctcttctggctttcatagactctgggtgaa
aatctggtgtaaattctgataggcttgcctttatatgttacttgaacttt
ttcccttactgctttagtatcaatcttatttagtgcattgttgtctgatt
tttttttcttcatttttttattagtatttagctcattacattccaatgct
atacaaaagttcccccataccaccgaccccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_60068369_60069457
seq2: B6Ng01-327E06.g_63_1144

seq1  GAATTCTGATATGGAACTGGAAACTTATGAAAATGAATCATAATCGGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATATGGAACTGGAAACTTATGAAAATGAATCATAATCGGGGC  50

seq1  CACTTACCTGCCTCTGAGCAATATGTTCTGACTTAATAAGGGTCTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACCTGCCTCTGAGCAATATGTTCTGACTTAATAAGGGTCTTTTTT  100

seq1  TTTTATCAGTCTTCAAGATGCTTTAAGATAATAAATTCTGTAACGTTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCAGTCTTCAAGATGCTTTAAGATAATAAATTCTGTAACGTTGTC  150

seq1  ACTGGAATGTGACGATAGTCTCTTTGCAAAAGGTTACACATTTACATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAATGTGACGATAGTCTCTTTGCAAAAGGTTACACATTTACATGTT  200

seq1  AGAGTTAATATGTAGCTATATAATTGGAAGAAAAGCCCACAGATTTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTAATATGTAGCTATATAATTGGAAGAAAAGCCCACAGATTTTAAT  250

seq1  CAAATCCCAAGAGAGTTTATTATAATTATATTTAATTCATCAAATGACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCCAAGAGAGTTTATTATAATTATATTTAATTCATCAAATGACAA  300

seq1  GAAATTTAATAAAGAATGGAACCTAGTTCATTTCATGAATAGAGAAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTAATAAAGAATGGAACCTAGTTCATTTCATGAATAGAGAAAGAT  350

seq1  TCTCATCAGTCTAGGTTTTACATTTTTCTTTTCTCATTTTAAGTTTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCAGTCTAGGTTTTACATTTTTCTTTTCTCATTTTAAGTTTCAAA  400

seq1  TAGAAAAAAAAAAATGTCTCCTGCAAATTAATAGATCTGACCTGAGATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAAAAAAAATGTCTCCTGCAAATTAATAGATCTGACCTGAGATCC  450

seq1  ACTGTGAAGCAAGAGTTTTTAGGACATTTTTTAGTTTGCCCTACTTAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAAGCAAGAGTTTTTAGGACATTTTTTAGTTTGCCCTACTTAAGC  500

seq1  AATCTACAGTTCATTTAAAGCAACAATGACAAAAGATTCTTCAGAGTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACAGTTCATTTAAAGCAACAATGACAAAAGATTCTTCAGAGTTAT  550

seq1  TTTACAAAGTTGCAATGTTTTGTTTTGTTTTGTTTTTTTAGGGGAGATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAGTTGCAATGTTTTGTTTTGTTTTGTTTTTTTAGGGGAGATGA  600

seq1  AGCATAGAGATCTCATAAAGATTTTCATTACAATCAAAGTTCAAAATTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGAGATCTCATAAAGATTTTCATTACAATCAAAGTTCAAAATTAA  650

seq1  GTTGGCACAATGAGGAAAATGTTGAGCACATAGTAATGAATTCTAATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCACAATGAGGAAAATGTTGAGCACATAGTAATGAATTCTAATTCA  700

seq1  TAACACAAGTAGTACTTTCTAAAACTAGGCCTATTCAACTTCTTTTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAAGTAGTACTTTCTAAAACTAGGCCTATTCAACTTCTTTTAAAA  750

seq1  CTCCCACATTATCATGGAATACTTTGGTTTCTCCATCTATGTTAATTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACATTATCATGGAATACTTTGGTTTCTCCATCTATGTTAATTGAG  800

seq1  AGTTTGGCTGGATATGGTAGCCTGGGCTGGAATTTGTGTTCTCTTAGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGCTGGATATGGTAGCCTGGGCTGGAATTTGTGTTCTCTTAGTGT  850

seq1  CTGTATAACATCTGTCCAGGCTCTTCTGGCTTTCATAGACTCT-GGTGAA  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGTATAACATCTGTCCAGGCTCTTCTGGCTTTCATAGACTCTGGGTGAA  900

seq1  AATCTGGTGT-AATTCTGATAGGCTTGCCTTTATATGTTACTTGAACTTT  948
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGTGTAAATTCTGATAGGCTTGCCTTTATATGTTACTTGAACTTT  950

seq1  TTCCCTTACTGCTTTTAGTATTCAATCTTTATTTAGTGCATTTGTTGTTC  998
      |||||||||||| ||||||| |||||| |||||||||||| |||||| ||
seq2  TTCCCTTACTGC-TTTAGTA-TCAATC-TTATTTAGTGCA-TTGTTG-TC  995

seq1  TGATTTTTTTTCTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTT  1048
      |||||||||||  |||  |||||||||| |||||||||||| ||||| ||
seq2  TGATTTTTTTTTCTTCATTTTTTTATTA-GTATTTAGCTCA-TTACA-TT  1042

seq1  CCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCA  1089
      |||||||||||| |||  ||||||||| ||||| |||||||
seq2  CCAATGCTATACAAAAGTTCCCCCATA-CCACCGACCCCCA  1082


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