MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-328E08
Chromosome	10 (Build37)	X (Build37)
Map Location	60,258,636 - 60,259,753	74,231,901 - 74,233,112
singlet/doublet	singlet	singlet
Overlap gene	Unc5b
Upstream gene	Cbara1, EG664907, LOC664936, Dnajb12, Ddit4, D10Ertd641e, Ascc1, Spock2, Chst3, LOC100039080, Psap, Cdh23, 4632428N05Rik, Slc29a3
Downstream gene	Pcbd1, Sgpl1, 1700021K02Rik, Adamts14, Prf1, EG237361, X99384, Nodal, Eif4ebp2, D830039M14Rik, Lrrc20, Npffr1, Ppa1, Sar1a, Tysnd1, Aifm2, H2afy2, LOC100039284
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cbara1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216001 MGI:2384909
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664907 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664907 MGI:3647495
definition	note : predicted gene, EG664907 pseudo : _no_value

name	LOC664936 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664936
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 ESTs, 9 Proteins pseudo : _no_value

name	Dnajb12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56709 MGI:1931881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddit4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74747 MGI:1921997
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D10Ertd641e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52717 MGI:1289325
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ascc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69090 MGI:1916340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spock2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94214 MGI:1891351
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chst3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53374 MGI:1858224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039080 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039080
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Psap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19156 MGI:97783
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdh23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22295 MGI:1890219
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4632428N05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74048 MGI:1921298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc29a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71279 MGI:1918529
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Unc5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107449 MGI:894703
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcbd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13180 MGI:94873
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sgpl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20397 MGI:1261415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700021K02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65971 MGI:1923820
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 6 mRNAs

name	Adamts14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237360 MGI:2179942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18646 MGI:97551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG237361 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237361 MGI:3645354
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 674 ESTs, 8 Proteins

name	X99384 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27355 MGI:1351623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nodal (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18119 MGI:97359
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eif4ebp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13688 MGI:109198
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D830039M14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320949 MGI:2445111
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs

name	Lrrc20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216011 MGI:2387182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Npffr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237362 MGI:2685082
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins

name	Ppa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67895 MGI:97831
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sar1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20224 MGI:98230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tysnd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71767 MGI:1919017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 102 ESTs, 5 Proteins

name	Aifm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71361 MGI:1918611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	H2afy2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404634 MGI:3037658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039284 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039284
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs

name	Cbara1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130037 GeneID:216001 MGI:2384909
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium binding atopy-related autoantigen 1 transcript_id : NM_144822.2

name	Dnajb12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982700 GeneID:56709 MGI:1931881
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily B, member 12 transcript_id : NM_019965.2

name	Ddit4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348052 GeneID:74747 MGI:1921997
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA-damage-inducible transcript 4 transcript_id : NM_029083.2

name	D10Ertd641e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130312 GeneID:52717 MGI:1289325
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 10, ERATO Doi 641, expressed transcript_id : NM_025514.2

name	Ascc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037140 GeneID:69090 MGI:1916340
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : activating signal cointegrator 1 complex subunit 1 transcript_id : NM_026937.1

name	Spock2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254122 GeneID:94214 MGI:1891351
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 transcript_id : NM_052994.2

name	Chst3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328238 GeneID:53374 MGI:1858224
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbohydrate (chondroitin 6/keratan) sulfotransferase 3 transcript_id : NM_016803.2

name	Psap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328184 GeneID:19156 MGI:97783
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prosaposin transcript_id : NM_011179.2

name	Cdh23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124517679 GeneID:22295 MGI:1890219
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cadherin 23 (otocadherin) transcript_id : NM_023370.2

name	4632428N05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349860 GeneID:74048 MGI:1921298
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4632428N05 gene transcript_id : NM_028732.3

name	Slc29a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347496 GeneID:71279 MGI:1918529
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 29 (nucleoside transporters), member 3 transcript_id : NM_023596.3

name	Unc5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85861261 GeneID:107449 MGI:894703
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : unc-5 homolog B (C. elegans) transcript_id : NM_029770.2

name	Pcbd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892664 GeneID:13180 MGI:94873
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1 transcript_id : NM_025273.2

name	Sgpl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543693 GeneID:20397 MGI:1261415
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sphingosine phosphate lyase 1 transcript_id : NM_009163.2

name	1700021K02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63079690 GeneID:65971 MGI:1923820
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700021K02 gene transcript_id : NM_001017433.1

name	1700021K02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63079688 GeneID:65971 MGI:1923820
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700021K02 gene transcript_id : NM_001017419.1

name	1700021K02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63079698 GeneID:65971 MGI:1923820
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700021K02 gene transcript_id : NM_001017441.1

name	1700021K02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63079694 GeneID:65971 MGI:1923820
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700021K02 gene transcript_id : NM_023064.3

name	1700021K02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63079696 GeneID:65971 MGI:1923820
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700021K02 gene transcript_id : NM_001017409.1

name	1700021K02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63079692 GeneID:65971 MGI:1923820
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700021K02 gene transcript_id : NM_001017407.1

name	Adamts14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487464 GeneID:237360 MGI:2179942
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 transcript_id : NM_001081127.1

name	Prf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34808711 GeneID:18646 MGI:97551
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : perforin 1 (pore forming protein) transcript_id : NM_011073.2

name	EG237361 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388218 GeneID:237361 MGI:3645354
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 674 ESTs, 8 Proteins product : predicted gene, EG237361 transcript_id : XM_137118.7

name	X99384 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305364 GeneID:27355 MGI:1351623
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence X99384 transcript_id : NM_013753.1

name	Nodal (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62996442 GeneID:18119 MGI:97359
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nodal transcript_id : NM_013611.3

name	Eif4ebp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129916 GeneID:13688 MGI:109198
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 4E binding protein 2 transcript_id : NM_010124.2

name	Lrrc20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956307 GeneID:216011 MGI:2387182
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 20 transcript_id : NM_153542.1

name	Npffr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82933095 GeneID:237362 MGI:2685082
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins product : neuropeptide FF receptor 1 transcript_id : XM_137119.4

name	Ppa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802132 GeneID:67895 MGI:97831
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pyrophosphatase (inorganic) 1 transcript_id : NM_026438.3

name	Sar1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130548 GeneID:20224 MGI:98230
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SAR1 gene homolog A (S. cerevisiae) transcript_id : NM_009120.2

name	Tysnd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388223 GeneID:71767 MGI:1919017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 102 ESTs, 5 Proteins product : trypsin domain containing 1, transcript variant 1 transcript_id : XM_125636.3

name	Aifm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359615 GeneID:71361 MGI:1918611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apoptosis-inducing factor, mitochondrion-associated 2 transcript_id : NM_001039194.2

name	Aifm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130271 GeneID:71361 MGI:1918611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apoptosis-inducing factor, mitochondrion-associated 2 transcript_id : NM_178058.3

name	Aifm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24418884 GeneID:71361 MGI:1918611
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apoptosis-inducing factor, mitochondrion-associated 2 transcript_id : NM_153779.1

name	H2afy2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892300 GeneID:404634 MGI:3037658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : H2A histone family, member Y2 transcript_id : NM_207000.2

name	LOC100039284 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260898 GeneID:100039284
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs product : similar to TBP-associated factor 4 transcript_id : XM_001472609.1

name	Cbara1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450201 GeneID:216001 MGI:2384909
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : calcium binding atopy-related autoantigen 1 protein_id : NP_659071.1

name	Dnajb12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982701 CCDS:CCDS23867.1 GeneID:56709 MGI:1931881
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : DnaJ homolog 10 product : DnaJ (Hsp40) homolog, subfamily B, member 12 protein_id : NP_064349.2

name	Ddit4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312868 CCDS:CCDS23868.1 GeneID:74747 MGI:1921997
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : dexamethasone-induced gene 2 product : HIF-1 responsive RTP801 protein_id : NP_083359.1

name	D10Ertd641e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384936 CCDS:CCDS23869.1 GeneID:52717 MGI:1289325
definition	codon_start : 1 product : hypothetical protein LOC52717 protein_id : NP_079790.1

name	Ascc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037141 CCDS:CCDS23870.1 GeneID:69090 MGI:1916340
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence ISS] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003713 - transcription coactivator activity [Evidence ISS] GO_process : GO:0045449 - regulation of transcription [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : activating signal cointegrator 1 complex subunit 1 protein_id : NP_081213.1

name	Spock2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16506279 GeneID:94214 MGI:1891351
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence ISS] [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence ISS] [Evidence IEA] GO_process : GO:0030198 - extracellular matrix organization and biogenesis [Evidence ISS]; GO:0045595 - regulation of cell differentiation [Evidence ISS]; GO:0007416 - synaptogenesis [Evidence ISS] codon_start : 1 note : testican-2; granule cell antiserum positive 26 product : sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 protein_id : NP_443720.1

name	Chst3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7949014 CCDS:CCDS23871.1 GeneID:53374 MGI:1858224
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008459 - chondroitin 6-sulfotransferase activity [Evidence IEA]; GO:0008146 - sulfotransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 note : chondroitin 6-sulfotransferase product : carbohydrate (chondroitin 6/keratan) sulfotransferase 3 protein_id : NP_058083.1

name	Psap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328185 GeneID:19156 MGI:97783
definition	GO_component : GO:0005764 - lysosome [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_process : GO:0006629 - lipid metabolism [Evidence IEA]; GO:0006665 - sphingolipid metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : snoRNA MBII-198 product : prosaposin protein_id : NP_035309.2

name	Cdh23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124517680 GeneID:22295 MGI:1890219
definition	GO_component : GO:0005932 - basal body [Evidence IDA]; GO:0005929 - cilium [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0001917 - photoreceptor inner segment [Evidence IDA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0042491 - auditory receptor cell differentiation [Evidence IMP]; GO:0016339 - calcium-dependent cell-cell adhesion [Evidence ISS]; GO:0007155 - cell adhesion [Evidence TAS]; GO:0007156 - homophilic cell adhesion [Evidence IEA]; GO:0048839 - inner ear development [Evidence IMP]; GO:0048563 - post-embryonic organ morphogenesis [Evidence IMP]; GO:0035058 - sensory cilium biogenesis [Evidence IMP]; GO:0050953 - sensory perception of light stimulus [Evidence IMP]; GO:0007605 - sensory perception of sound [Evidence IMP] [Evidence IGI] codon_start : 1 note : otocadherin; bustling; waltzer; modifier of deaf waddler; age related hearing loss 1; bobby product : cadherin 23 protein_id : NP_075859.2

name	4632428N05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386340 GeneID:74048 MGI:1921298
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : Gi24 receptor product : Gi24 receptor precursor protein_id : NP_083008.1

name	Slc29a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963743 GeneID:71279 MGI:1918529
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : equilibrative nucleoside transporter 3 protein_id : NP_076085.1

name	Unc5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861262 CCDS:CCDS23872.1 GeneID:107449 MGI:894703
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : unc5 homolog (C. elegans) 2 product : unc-5 homolog B protein_id : NP_084046.2

name	Pcbd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384608 GeneID:13180 MGI:94873
definition	GO_component : GO:0005634 - nucleus [Evidence IPI] GO_function : GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]; GO:0004505 - phenylalanine 4-monooxygenase activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0051291 - protein heterooligomerization [Evidence IPI]; GO:0051289 - protein homotetramerization [Evidence IPI] codon_start : 1 note : dimerization cofactor of hepatocyte nuclear factor-1-alpha; 6-pyruvoyl-tetrahydropterin synthase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) product : pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1 protein_id : NP_079549.1

name	Sgpl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543694 GeneID:20397 MGI:1261415
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0008117 - sphinganine-1-phosphate aldolase activity [Evidence IEA] [Evidence ISS]; GO:0008483 - transaminase activity [Evidence IEA]; GO:0016769 - transferase activity, transferring nitrogenous groups [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence ISS] [Evidence IEA]; GO:0009058 - biosynthesis [Evidence IEA]; GO:0019752 - carboxylic acid metabolism [Evidence IEA]; GO:0006672 - ceramide metabolism [Evidence ISS]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0030149 - sphingolipid catabolism [Evidence ISS] codon_start : 1 note : sphingosine-1-phosphate lyase 1 product : sphingosine phosphate lyase 1 protein_id : NP_033189.2

name	1700021K02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63079691 CCDS:CCDS23873.1 GeneID:65971 MGI:1923820
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; stromal protein associated with thymii and lymph nodes; thymus and testis specific nuclear protein product : stromal protein associated with thymii and lymph nodes isoform 1 protein_id : NP_001017433.1

name	1700021K02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63079689 GeneID:65971 MGI:1923820
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; stromal protein associated with thymii and lymph nodes; thymus and testis specific nuclear protein product : stromal protein associated with thymii and lymph nodes isoform 2 protein_id : NP_001017419.1

name	1700021K02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63079695 GeneID:65971 MGI:1923820
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 exception : alternative start codon note : isoform 3 is encoded by transcript variant 3; stromal protein associated with thymii and lymph nodes; thymus and testis specific nuclear protein product : stromal protein associated with thymii and lymph nodes isoform 3 protein_id : NP_075551.3 transl_except : (pos:60638093..60638095,aa:Met)

name	1700021K02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63079693 GeneID:65971 MGI:1923820
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 exception : alternative start codon note : isoform 5 is encoded by transcript variant 5; stromal protein associated with thymii and lymph nodes; thymus and testis specific nuclear protein product : stromal protein associated with thymii and lymph nodes isoform 5 protein_id : NP_001017407.1 transl_except : (pos:60638093..60638095,aa:Met)

name	1700021K02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63079699 CCDS:CCDS23874.1 GeneID:65971 MGI:1923820
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 exception : alternative start codon note : isoform 4 is encoded by transcript variant 4; stromal protein associated with thymii and lymph nodes; thymus and testis specific nuclear protein product : stromal protein associated with thymii and lymph nodes isoform 4 protein_id : NP_001017441.1 transl_except : (pos:60638093..60638095,aa:Met)

name	1700021K02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63079697 GeneID:65971 MGI:1923820
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 exception : alternative start codon note : isoform 6 is encoded by transcript variant 6; stromal protein associated with thymii and lymph nodes; thymus and testis specific nuclear protein product : stromal protein associated with thymii and lymph nodes isoform 6 protein_id : NP_001017409.1 transl_except : (pos:60638093..60638095,aa:Met)

name	Adamts14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487465 GeneID:237360 MGI:2179942
definition	GO_component : GO:0031012 - extracellular matrix [Evidence IEA]; GO:0005576 - extracellular region [Evidence IDA] GO_function : GO:0008233 - peptidase activity [Evidence IEA]; GO:0017074 - procollagen N-endopeptidase activity [Evidence IDA] GO_process : GO:0030199 - collagen fibril organization [Evidence IDA] codon_start : 1 note : a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 14 product : a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 protein_id : NP_001074596.1

name	Prf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34808712 CCDS:CCDS23875.1 GeneID:18646 MGI:97551
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0019835 - cytolysis [Evidence IDA] codon_start : 1 exception : mismatches in translation note : pore forming protein product : perforin 1 protein_id : NP_035203.2

name	EG237361 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82933068 GeneID:237361 MGI:3645354
definition	codon_start : 1 product : similar to ribosomal protein L27a-like protein_id : XP_137118.4

name	X99384 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305365 CCDS:CCDS23877.1 GeneID:27355 MGI:1351623
definition	codon_start : 1 exception : mismatches in translation product : paladin protein_id : NP_038781.1

name	Nodal (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305317 CCDS:CCDS23878.1 GeneID:18119 MGI:97359
definition	GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP] [Evidence IGI]; GO:0045165 - cell fate commitment [Evidence IMP]; GO:0016477 - cell migration [Evidence IMP]; GO:0042074 - cell migration involved in gastrulation [Evidence IDA]; GO:0007368 - determination of left/right symmetry [Evidence IMP] [Evidence IGI] [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0001947 - heart looping [Evidence IGI]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0002085 - repression of premature neural plate formation [Evidence IMP]; GO:0019827 - stem cell maintenance [Evidence IMP] [Evidence IGI]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence ISS] codon_start : 1 exception : mismatches in translation note : early embryo mesoderm formation; transgenic lethal 413.d product : nodal protein_id : NP_038639.1

name	Eif4ebp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753742 CCDS:CCDS23879.1 GeneID:13688 MGI:109198
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0008190 - eukaryotic initiation factor 4E binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0019933 - cAMP-mediated signaling [Evidence IDA]; GO:0008286 - insulin receptor signaling pathway [Evidence IDA]; GO:0017148 - negative regulation of protein biosynthesis [Evidence IEA]; GO:0045947 - negative regulation of translational initiation [Evidence IEA]; GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IEA]; GO:0006446 - regulation of translational initiation [Evidence TAS] codon_start : 1 product : eukaryotic translation initiation factor 4E binding protein 2 protein_id : NP_034254.1

name	Lrrc20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956308 CCDS:CCDS23881.1 GeneID:216011 MGI:2387182
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine rich repeat containing 20 protein_id : NP_705770.1

name	Npffr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82933096 GeneID:237362 MGI:2685082
definition	codon_start : 1 product : similar to RFamide-related peptide receptor protein_id : XP_137119.4

name	Ppa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754065 CCDS:CCDS23882.1 GeneID:67895 MGI:97831
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IDA] GO_process : GO:0006796 - phosphate metabolism [Evidence IC] codon_start : 1 product : pyrophosphatase protein_id : NP_080714.2

name	Sar1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703344 CCDS:CCDS23883.1 GeneID:20224 MGI:98230
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0016529 - sarcoplasmic reticulum [Evidence IDA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence IDA] codon_start : 1 note : SAR1a gene homolog 1 product : SAR1a gene homolog protein_id : NP_033146.1

name	Tysnd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260906 GeneID:71767 MGI:1919017
definition	codon_start : 1 product : trypsin domain containing 1 isoform 1 protein_id : XP_125636.3

name	Aifm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24418885 GeneID:71361 MGI:1918611
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] [Evidence ISS]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA]; GO:0004174 - electron-transferring-flavoprotein dehydrogenase activity [Evidence ISS]; GO:0050660 - FAD binding [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : isoform 1 is encoded by transcript variant 1; apoptosis-inducing factor (AIF)-like mitochondrion-associated inducer of death product : apoptosis-inducing factor (AIF)-like mitchondrion-associated inducer of death isoform 1 protein_id : NP_722474.1

name	Aifm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861162 CCDS:CCDS23884.1 GeneID:71361 MGI:1918611
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] [Evidence ISS]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA]; GO:0004174 - electron-transferring-flavoprotein dehydrogenase activity [Evidence ISS]; GO:0050660 - FAD binding [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 3; apoptosis-inducing factor (AIF)-like mitochondrion-associated inducer of death product : apoptosis-inducing factor (AIF)-like mitchondrion-associated inducer of death isoform 2 protein_id : NP_001034283.1

name	Aifm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017355 CCDS:CCDS23884.1 GeneID:71361 MGI:1918611
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] [Evidence ISS]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA]; GO:0004174 - electron-transferring-flavoprotein dehydrogenase activity [Evidence ISS]; GO:0050660 - FAD binding [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; apoptosis-inducing factor (AIF)-like mitochondrion-associated inducer of death product : apoptosis-inducing factor (AIF)-like mitchondrion-associated inducer of death isoform 2 protein_id : NP_835159.1

name	H2afy2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46250738 CCDS:CCDS23885.1 GeneID:404634 MGI:3037658
definition	GO_component : GO:0001740 - Barr body [Evidence ISS]; GO:0005694 - chromosome [Evidence IEA]; GO:0000786 - nucleosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0007001 - chromosome organization and biogenesis (sensu Eukaryota) [Evidence IEA]; GO:0007549 - dosage compensation [Evidence ISS]; GO:0006334 - nucleosome assembly [Evidence IEA] codon_start : 1 product : H2A histone family, member Y2 protein_id : NP_996883.1

name	LOC100039284 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260899 GeneID:100039284
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472659.1

name	LOC100039080 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039080
definition	number : 3 pseudo : _no_value

name	LOC100039080 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039080
definition	number : 2 pseudo : _no_value

name	LOC100039080 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039080
definition	number : 1 pseudo : _no_value

name	LOC664936 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260890 GeneID:664936
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 ESTs, 9 Proteins product : similar to ribosomal protein L23a pseudo : _no_value transcript_id : XR_030603.1

name	D830039M14Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149260905 GeneID:320949 MGI:2445111
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs product : RIKEN cDNA D830039M14 gene transcript_id : XR_035206.1

clone name	MSMg01-364C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345I09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-500H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290F02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-293N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197G19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-501N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-328E08.b	B6Ng01-328E08.g
ACC	GA115583	GA115584
length	1,109	1,202
definition	B6Ng01-328E08.b	B6Ng01-328E08.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(60,258,636 - 60,259,753)	(74,231,901 - 74,233,112)
sequence	gaattctgcaggctgagccaggatggaggtggctgtcgtgggcaggacgg aggtgagtcaatggggtaaagaagataattaggaaaatgacagtgactaa tgtaatggacagccctttatagtttataaggtgcttctgcacttataaga ctggggtgtttacttacccaagactgtgaacaagactgaggagcctggaa gtttcagtgccataggcagatagttcagcgtctgcggggcaaacttgtgc tctagtgccctgccctgccctggcctggttactctcatactgtgactctg ttaatcttagcagtggcccgggagtctcagggtgactcccattttataga ggaggaagtaggtggctggggcaaggttgagggtggagctcgggtcctgt ccactcatttgggacaggcagcagggcaagcagttcttgaggcgaaagcc gttgtctgttggggaccgtacctggggctgcacagctcatggtctgagct gaaacctctgagaaacaaggcagtggctgaaagggacatttgtcatcatc tctgctggtggggacatgcaggagtagggctcggtggtccagcactgata ttttggtgcctttgcctctgtcacgaggggcatctgggctccactaagcc tcgttgatgctgttcccacctccagaagccagagctctgcatgggaaaca catcttagaatccagtgctctgtgccagaggccacagtctgaggaggcgt gggggtgctgtgagggaggtcagagagaggctgggcctagactatatagg tctctgattgcacagggtgtggcccatagtcctggtggcttgctgccctg ttccctaattaaagtgtccttttgaaaaatgccctctggtcctggctcag caaagcagatgaggcagttatgtcccctagtcacagggactccttgtctt ccatgcagtgcccggaggcccaggacctaactgtgaaggagaggctgggg ctggcagagctgtgtccacccagtctggtcccattgcacactacctctag gcggcactcttccacaccctgtgcaacagccagatagagcaccattgaaa ggctctgag	gaattctcacctgaggaataccgaatggatgagaagcacctgaaaaaatt ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat ttcacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggtgatgatgtggagaaagaggaacactcctccattgttggtg ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca gaaaattggacatagtaaggcaactctttaaccagcatttctgtgcacag acaccgcagatacttactatgatgtcacaaactttcatcagttaagaccc ttgagtttttacattgtttctgctctgtattgctcattaatcccaaggaa cagtgtgataagtataggattaagcatgtgtgttttagtacctgttgctc tctaggactgggaattgtaactcatgtatatataggaaaagtactacggg gtgatattaagtagtgtactttcatgactttctaaattaatcctttttac acatatgtcactccacaatcctcacgatctcatacactgacgttagtggc ctcctataatctggaaaattgttttcatctagaggaatttgctttttttt tccaaatggagtttactatttttgttattttagtcattttggctgtaaaa ataagaatcatgaatggttagggagatggctcattggatgagacactgtt caagcatgaggatattataatctgagataaaatgtccataattcacatag aagctgtatgtatagtttgaacatctgtaatctcagcacctctatgaaga tataggaggcagagatgggagaattcctgaaactcgggggccaactagct tagcatacatagaagcaaacatgatagcctatgtcaaataggtttacaat gagaagcacacttaaggtctgacttatatacatgccatagctgctgcact cacatatgtaaatgccatgtctcatcacaacacactgcacacacattcac acccagcacccaccatatacacatgcacaaatagtgaaataggatgtgtc ctcagacatctgcttcttttaatggtgaaaaatactcagaggggggagaa ttccggccactaggtacatatcatgcaatcaatggcaccttggaggaatt tt
quality values	Open. Hide. 62 47 31 33 62 62 47 41 56 41 62 54 62 62 62 62 62 62 44 37 62 62 59 43 62 62 62 62 59 44 46 28 46 56 33 45 48 54 62 62 62 59 62 62 62 62 59 59 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 48 42 46 56 49 62 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 59 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 43 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 38 40 58 58 58 58 58 54 58 54 54 58 58 54 58 58 58 58 58 58 58 58 54 54 54 58 58 54 54 58 54 58 58 58 54 58 52 58 58 58 58 58 58 54 58 52 52 51 51 58 58 41 41 58 54 58 58 58 53 52 54 58 51 43 58 58 58 49 50 51 58 58 58 58 51 58 51 51 45 50 51 47 50 58 52 58 58 58 54 58 58 58 51 39 30 54 49 58 58 51 46 50 41 43 42 17 41 51 51 43 27 52 58 53 34 58 44 39 46 58 40 54 58 52 58 49 50 38 54 54 58 58 58 58 49 50 50 50 50 58 51 54 46 52 28 51 58 50 51 40 49 53 51 58 50 58 52 54 58 51 51 43 39 28 27 54 17 49 49 50 29 42 53 53 42 53 49 49 39 18 44 37 21 47 36 45 51 41 54 54 54 42 52 42 42 53 53 45 52 49 27 54 40 39 18 51 27 32 45 28 54 22 51 40 51 18 47 29 41 35 54 40 36 46 33 37 20 28 27 40 52 40 40 44 35 22 49 39 41 53 39 40 39 33 22 34 36 31 31 32 31 28 52 49 30 37 34 34 41 18 49 51 39 42 40 29 34 34 52 31 51 51 32 41 42 36 42 31 36 26 31 31 32 46 34 26 42 29 43 23 46 41 34 21 24 30 31 36 51 35 34 34 43 30 29 42 31 51 51 31 28 42 48 46 46 28 30 31 24 46 43 42 31 27 22 32 31 31 27 25 10 23 27 23 18 28 9 30 27 46 33 28 31 28 23 34 27 32 35 18 25 13 31 14 25 27 24 24 16 28 31 38 32 26 32 38 27 25 31 21 25 8 19 46 22 31 25 26 16 15 17 15 38 32 29 29 42 20 37 32 31 31 33 33 21 33 42 20 28 18 13 14 38 18 19 17 28 24 30 18 12 31 14 19 34 26 21 21 32 31 14 31 30 18 22 13 16 10 37 17 15 17 30 29 43 43 28 19 29 15 24 7 9 13 37 14 27 32 12 8 15 32 33 21 17 32 34 22 20 24 31 34 25 21 28 16 21 32 25 19 21 22 20 20 20 14 10 19 11 12 5 6 20 16 11 8 21 27 6 5 20 8 15 7 16 14 10 21 11 8 15 15 13 15 26 14 8 3 3 3 3 8 6 9 16 10 15 14 13 15 4 8 6 7 11 13 10 16 14 23 20 23 14 11 11 5 12 9 14 5 6 10 14 19 20 5	Open. Hide. 62 44 59 59 62 62 62 59 41 51 32 32 32 24 27 38 37 54 46 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 54 54 54 43 62 59 62 54 54 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 54 58 58 58 54 58 58 58 58 49 58 58 58 58 58 54 54 52 58 58 58 58 58 58 58 54 58 58 58 58 58 52 58 48 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 58 58 54 54 58 58 58 42 45 58 58 58 58 58 58 51 43 58 51 54 51 58 58 58 58 58 46 41 58 58 50 58 58 58 42 50 58 51 58 49 50 58 47 48 58 50 46 58 58 58 49 58 58 58 58 58 58 58 58 50 50 37 27 58 48 49 58 47 58 50 58 58 36 46 40 51 54 53 58 58 58 58 51 37 50 41 49 58 58 32 49 50 51 53 32 51 58 58 49 58 51 50 53 54 41 46 58 58 49 37 41 50 58 37 58 33 40 50 35 50 53 45 52 52 54 49 26 49 45 32 54 51 52 37 35 26 52 54 30 54 37 39 37 41 49 40 33 26 42 54 34 46 20 24 31 41 54 25 47 40 40 40 40 45 26 53 40 53 25 54 31 29 32 39 45 45 40 40 40 39 53 42 39 54 21 28 21 41 54 54 46 32 46 35 33 31 31 41 37 33 39 53 28 24 34 36 40 32 29 41 53 30 42 43 53 36 36 32 41 32 31 34 33 39 33 53 31 35 33 35 32 19 31 31 31 41 25 30 33 32 43 39 35 38 31 39 23 25 33 32 43 32 33 30 31 33 33 17 32 29 33 31 30 31 25 40 24 41 23 36 28 46 17 28 25 32 47 22 18 16 36 37 22 33 23 34 30 32 29 46 31 31 38 34 34 48 47 46 30 13 24 13 38 31 34 18 28 32 30 34 27 16 37 19 33 26 21 17 32 31 26 13 16 9 13 11 19 30 23 11 32 37 33 30 31 31 39 27 32 38 31 37 31 26 25 47 17 10 7 5 8 35 44 34 22 10 5 16 14 24 27 21 32 30 14 11 38 32 15 27 24 28 16 21 28 28 22 30 25 31 38 22 38 18 16 10 14 14 8 21 15 21 30 14 20 23 27 19 10 33 27 32 32 32 34 27 19 25 33 28 9 13 11 15 13 15 32 31 28 43 18 20 33 13 22 19 12 33 28 24 26 19 10 21 10 12 23 4 6 14 17 18 11 18 19 26 8 5 4 8 11 7 10 13 18 10 30 9 3 5 3 17 22 5 4 5 5 14 33 11 7 16 20 5 14 20 20 12 12 8 11 16 18 15 24 13 20 16 20 11 20 12 6 6 9 15 40 17 3 3 8 10 3 5 5 3 6 6 6 7 9 8 5 5 18 4 2 3 14 9 18 6 3 7 7 10 20 29 12 9 5 19 2 3 4 6 18 27 28 28 13 12 16 20 20 7 4 5 4 4 8 27 30 9 8 21 5 11 10 4 12 5 9 6 9 4 4 1 1 3 2 5 4 6 6 16 5 5 4 7 12 10 16 7 11 13 6 4 3 3 6 6 6 5 16 9 10 25 10 8 3 6 6 9 17 3 12 7 10 26 8

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_60258636_60259753
seq2: B6Ng01-328E08.b_45_1153 (reverse)

seq1  CTCAGAGCCTCTCAATGGTGCCTCTAATCCTGGCTGTTGCGGCCAGGGTG  50
      |||||||||| ||||||||| |||||   |||||||||||   |||||||
seq2  CTCAGAGCCTTTCAATGGTG-CTCTA--TCTGGCTGTTGC--ACAGGGTG  45

seq1  TGGAAGAGTTGCCGCCCTAGAGGTTAGTGTGCAATGGGACCAGACTGGGT  100
      |||||||| ||||| |||||||| ||||||||||||||||||||||||||
seq2  TGGAAGAG-TGCCG-CCTAGAGG-TAGTGTGCAATGGGACCAGACTGGGT  92

seq1  GGACACAGCTCTGCCAGCCCCAGCCTCTCCTTCACAGTTTAGGTCCTGGG  150
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGACACAGCTCTGCCAGCCCCAGCCTCTCCTTCACAG-TTAGGTCCTGGG  141

seq1  CCTCCGGGCACTGCATGGAAGACAAGGAGTCCCTGTGACTAGGGGACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCGGGCACTGCATGGAAGACAAGGAGTCCCTGTGACTAGGGGACATA  191

seq1  ACTGCCTCATCTGCTTTGCTGAGCCAGGACCAGAGGGCATTTTTCAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTCATCTGCTTTGCTGAGCCAGGACCAGAGGGCATTTTTCAAAAG  241

seq1  GACACTTTAATTAGGGAACAGGGCAGCAAGCCACCAGGACTATGGGCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTTAATTAGGGAACAGGGCAGCAAGCCACCAGGACTATGGGCCAC  291

seq1  ACCCTGTGCAATCAGAGACCTATATAGTCTAGGCCCAGCCTCTCTCTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTGCAATCAGAGACCTATATAGTCTAGGCCCAGCCTCTCTCTGAC  341

seq1  CTCCCTCACAGCACCCCCACGCCTCCTCAGACTGTGGCCTCTGGCACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCACAGCACCCCCACGCCTCCTCAGACTGTGGCCTCTGGCACAGA  391

seq1  GCACTGGATTCTAAGATGTGTTTCCCATGCAGAGCTCTGGCTTCTGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGATTCTAAGATGTGTTTCCCATGCAGAGCTCTGGCTTCTGGAGG  441

seq1  TGGGAACAGCATCAACGAGGCTTAGTGGAGCCCAGATGCCCCTCGTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACAGCATCAACGAGGCTTAGTGGAGCCCAGATGCCCCTCGTGACA  491

seq1  GAGGCAAAGGCACCAAAATATCAGTGCTGGACCACCGAGCCCTACTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAAAGGCACCAAAATATCAGTGCTGGACCACCGAGCCCTACTCCTG  541

seq1  CATGTCCCCACCAGCAGAGATGATGACAAATGTCCCTTTCAGCCACTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCCCCACCAGCAGAGATGATGACAAATGTCCCTTTCAGCCACTGCC  591

seq1  TTGTTTCTCAGAGGTTTCAGCTCAGACCATGAGCTGTGCAGCCCCAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCTCAGAGGTTTCAGCTCAGACCATGAGCTGTGCAGCCCCAGGTA  641

seq1  CGGTCCCCAACAGACAACGGCTTTCGCCTCAAGAACTGCTTGCCCTGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCCCCAACAGACAACGGCTTTCGCCTCAAGAACTGCTTGCCCTGCTG  691

seq1  CCTGTCCCAAATGAGTGGACAGGACCCGAGCTCCACCCTCAACCTTGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCCAAATGAGTGGACAGGACCCGAGCTCCACCCTCAACCTTGCCC  741

seq1  CAGCCACCTACTTCCTCCTCTATAAAATGGGAGTCACCCTGAGACTCCCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACCTACTTCCTCCTCTATAAAATGGGAGTCACCCTGAGACTCCCG  791

seq1  GGCCACTGCTAAGATTAACAGAGTCACAGTATGAGAGTAACCAGGCCAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACTGCTAAGATTAACAGAGTCACAGTATGAGAGTAACCAGGCCAGG  841

seq1  GCAGGGCAGGGCACTAGAGCACAAGTTTGCCCCGCAGACGCTGAACTATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCAGGGCACTAGAGCACAAGTTTGCCCCGCAGACGCTGAACTATC  891

seq1  TGCCTATGGCACTGAAACTTCCAGGCTCCTCAGTCTTGTTCACAGTCTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATGGCACTGAAACTTCCAGGCTCCTCAGTCTTGTTCACAGTCTTG  941

seq1  GGTAAGTAAACACCCCAGTCTTATAAGTGCAGAAGCACCTTATAAACTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGTAAACACCCCAGTCTTATAAGTGCAGAAGCACCTTATAAACTAT  991

seq1  AAAGGGCTGTCCATTACATTAGTCACTGTCATTTTCCTAATTATCTTCTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCTGTCCATTACATTAGTCACTGTCATTTTCCTAATTATCTTCTT  1041

seq1  TACCCCATTGACTCACCTCCGTCCTGCCCACGACAGCCACCTCCATCCTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCATTGACTCACCTCCGTCCTGCCCACGACAGCCACCTCCATCCTG  1091

seq1  GCTCAGCCTGCAGAATTC  1118
      ||||||||||||||||||
seq2  GCTCAGCCTGCAGAATTC  1109

seq1: chrX_74231901_74233112
seq2: B6Ng01-328E08.g_68_1269 (reverse)

seq1  AATATTCCTC--AGGTG-CATTGGTATTGCATGATATGGTACTTAAGTGA  47
      || |||||||  ||||| |||||  |||||||||||| |||| | |||| 
seq2  AAAATTCCTCCAAGGTGCCATTG--ATTGCATGATAT-GTACCT-AGTGG  46

seq1  GCAGAATTCT--CCCCTCTGAGTATTTTTTCACAAATAAAAAGAAAGCAG  95
       | |||||||  |||||||||||| |||||||| | |||||   ||||||
seq2  CCGGAATTCTCCCCCCTCTGAGTA-TTTTTCACCATTAAAA--GAAGCAG  93

seq1  ATGTTCTGA-GACACATCCCTATTTCACTA-TTGTGCATGTGTATATGGG  143
      ||| ||||| ||||||| |||||||||||| |||||||||||||||| ||
seq2  ATG-TCTGAGGACACAT-CCTATTTCACTATTTGTGCATGTGTATAT-GG  140

seq1  TGGGTGGCTGGGGTTGTGGATGTGTGTGCAGTGTGTTGGTGAATGAGACA  193
      ||||| ||||||  |||| |||||||||||||||||| ||| ||||||||
seq2  TGGGT-GCTGGG--TGTGAATGTGTGTGCAGTGTGTT-GTG-ATGAGACA  185

seq1  TGGCATTTACATATGTGAGTGCAGCAGCTATGGCATGTATATAAGTCAGA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTTACATATGTGAGTGCAGCAGCTATGGCATGTATATAAGTCAGA  235

seq1  CCTTAAGTGTTGCTTCTCATTGTAAACCTTATTTGACATAGGCTATCATG  293
      ||||||||| |||||||||||||||||| |||||||||||||||||||||
seq2  CCTTAAGTG-TGCTTCTCATTGTAAACC-TATTTGACATAGGCTATCATG  283

seq1  TTTGCTTCTATGTATGCTAAGCTAGTTGGCCCCCGAGTTTCAGGAATTCT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTCTATGTATGCTAAGCTAGTTGGCCCCCGAGTTTCAGGAATTCT  333

seq1  CCCATCTCTGCCTCCTATATCTTCATAGAGGTGCTGAGATTACAGATGTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTCTGCCTCCTATATCTTCATAGAGGTGCTGAGATTACAGATGTT  383

seq1  CAAACTATACATACAGCTTCTATGTGAATTATGGACATTTTATCTCAGAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTATACATACAGCTTCTATGTGAATTATGGACATTTTATCTCAGAT  433

seq1  TATAATATCCTCATGCTTGAACAGTGTCTCATCCAATGAGCCATCTCCCT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATCCTCATGCTTGAACAGTGTCTCATCCAATGAGCCATCTCCCT  483

seq1  AACCATTCATGATTCTTATTTTTACAGCCAAAATGACTAAAATAACAAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTCATGATTCTTATTTTTACAGCCAAAATGACTAAAATAACAAAA  533

seq1  ATAGTAAACTCCATTTGGAAAAAAAAAGCAAATTCCTCTAGATGAAAACA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAACTCCATTTGGAAAAAAAAAGCAAATTCCTCTAGATGAAAACA  583

seq1  ATTTTCCAGATTATAGGAGGCCACTAACGTCAGTGTATGAGATCGTGAGG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCAGATTATAGGAGGCCACTAACGTCAGTGTATGAGATCGTGAGG  633

seq1  ATTGTGGAGTGACATATGTGTAAAAAGGATTAATTTAGAAAGTCATGAAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGAGTGACATATGTGTAAAAAGGATTAATTTAGAAAGTCATGAAA  683

seq1  GTACACTACTTAATATCACCCCGTAGTACTTTTCCTATATATACATGAGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTACTTAATATCACCCCGTAGTACTTTTCCTATATATACATGAGT  733

seq1  TACAATTCCCAGTCCTAGAGAGCAACAGGTACTAAAACACACATGCTTAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTCCCAGTCCTAGAGAGCAACAGGTACTAAAACACACATGCTTAA  783

seq1  TCCTATACTTATCACACTGTTCCTTGGGATTAATGAGCAATACAGAGCAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATACTTATCACACTGTTCCTTGGGATTAATGAGCAATACAGAGCAG  833

seq1  AAACAATGTAAAAACTCAAGGGTCTTAACTGATGAAAGTTTGTGACATCA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATGTAAAAACTCAAGGGTCTTAACTGATGAAAGTTTGTGACATCA  883

seq1  TAGTAAGTATCTGCGGTGTCTGTGCACAGAAATGCTGGTTAAAGAGTTGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGTATCTGCGGTGTCTGTGCACAGAAATGCTGGTTAAAGAGTTGC  933

seq1  CTTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGTGG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGTGG  983

seq1  TTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTC  1033

seq1  CACATCATCACCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCATCACCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATT  1083

seq1  CTGACTGGTGTGAGGTGAAATCTCAGGGTTGTTTTGATTTGCATTTCTCT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGGTGTGAGGTGAAATCTCAGGGTTGTTTTGATTTGCATTTCTCT  1133

seq1  GATGATTAAGGATGCTGAGAATTTTTTCAGGTGCTTCTCATCCATTCGGT  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTAAGGATGCTGAGAATTTTTTCAGGTGCTTCTCATCCATTCGGT  1183

seq1  ATTCCTCAGGTGAGAATTC  1212
      |||||||||||||||||||
seq2  ATTCCTCAGGTGAGAATTC  1202

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Alignment Information