BAC Information

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BAC

Clone NameB6Ng01-329N07
ChromosomeX (Build37)
Map Location 146,352,021 - 146,352,841
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC434865, EG624310, Ott, LOC666888, LOC100039598, LOC100039890, LOC100039612, EG666923, EG624378, LOC100039934, LOC100039629, LOC382243, EG666961, EG666968, OTTMUSG00000018988, LOC100039651, EG624568
Downstream geneLOC382244, LOC100039669, EG666982, EG624631, EG546387, LOC333588, Tmem29, LOC100040101, Alas2, Apex2, Pfkfb1, Tro, LOC100039716, Maged2, Itih5l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329N07.bB6Ng01-329N07.g
ACCGA116683GA116684
length1,1951,116
definitionB6Ng01-329N07.b B6Ng01-329N07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcctaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagatgactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaattttttcttcagagatttgaagtttttatcatac
agatctttcacctccttagttagagtcacgccaagatattttatattatt
tgtgactattgagaagggtgttgtttccctaatttcttctcagcctgtta
ttcttggtataagaagaaagccatgacttgttgagtttatttttattatc
cagctacttcacaaagctgtttatcaggttaggagtctcctgggtagaat
tttaaggtcactttattatatctatcatatctacttgcaaaagtgaattg
actctcctcttgccaattgtgaattcctcgtgataccttcctctg
gaattcagtgagaatattatctattcattaatatttaaatttacttcaag
tagagatggttaaactaattaggcattacaaaaaaacagagctagaatag
ctcagggctagtctgcagggtaattacttaggacagtagccagtctcacc
caaacaagggaatatacaatggcctagctaatagctaggtttaccatgta
agagttagggaatcccactgagacaggaaatttcactacagccaggtata
acaggcaacattgcatattagaagcaagttggtgaattcttctgacaact
ggagattctccacagatacttaagagaaaatccaatttcactcatacaag
aatttatcaagccctaggaaataggatgtttgtggtattgcattattcat
gagaaggtctgctagagcagaactccctggtcctagctttcacaaggctc
aaaggagtagcacaaaatgtaattagggtgtgaaatccttacctgtgatt
agctgaccctaagcaaagctgttttatctttactgaaatatgacatggtt
cctgtaaatccttttgaagtcattcctttgttttgtgtcaggtaacttca
atgtactttgcctgctgggacatcctacctctttgttttctatattatat
aagactggtgttcactttgtgataatacattcagattctacacaacctct
cctgttgattttgtctgtcattcgctgactctttgtcaccccgtaactag
agacccattctatgcagacagggaacaaaaagggtctgcggcaggggact
agtttaagaacttaggacaaaagctggtgtgaggtataggggagggaaac
acaactgtcagtccagtagggcacccaaatatgagatgtctggcacatcc
tcacactctcaagtcatttcttcctgcagagctttccaggcaggactaag
agatactaagaaacaaggaaataataaatctcttctgatgttccttggtc
tccaaaagaaacattcttcagaccttttgggagctagcatattagaacgc
atgctcaaagaatcatgatggtgtcatatgttgaatactactgatgctgt
aaatgttctctgatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_146352021_146352841
seq2: B6Ng01-329N07.g_363_1184

seq1  ACAACTGGAGATTCTCCACAGATACTTAAGAGAAAATCCAATTTCACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGGAGATTCTCCACAGATACTTAAGAGAAAATCCAATTTCACTCA  50

seq1  TACAAGAATTTATCAAGCCCTAGGAAATAGGATGTTTGTGGTATTGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAATTTATCAAGCCCTAGGAAATAGGATGTTTGTGGTATTGCATT  100

seq1  ATTCATGAGAAGGTCTGCTAGAGCAGAACTCCCTGGTCCTAGCTTTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGAGAAGGTCTGCTAGAGCAGAACTCCCTGGTCCTAGCTTTCACA  150

seq1  AGGCTCAAAGGAGTAGCACAAAATGTAATTAGGGTGTGAAATCCTTACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAAAGGAGTAGCACAAAATGTAATTAGGGTGTGAAATCCTTACCT  200

seq1  GTGATTAGCTGACCCTAAGCAAAGCTGTTTTATCTTTACTGAAATATGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTAGCTGACCCTAAGCAAAGCTGTTTTATCTTTACTGAAATATGAC  250

seq1  ATGGTTCCTGTAAATCCTTTTGAAGTCATTCCTTTGTTTTGTGTCAGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCCTGTAAATCCTTTTGAAGTCATTCCTTTGTTTTGTGTCAGGTA  300

seq1  ACTTCAATGTACTTTGCCTGCTGGGACATCCTACCTCTTTGTTTTCTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAATGTACTTTGCCTGCTGGGACATCCTACCTCTTTGTTTTCTATA  350

seq1  TTATATAAGACTGGTGTTCACTTTGTGATAATACATTCAGATTCTACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAGACTGGTGTTCACTTTGTGATAATACATTCAGATTCTACACA  400

seq1  ACCTCTCCTGTTGATTTTGTCTGTCATTCGCTGACTCTTTGTCACCCCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCCTGTTGATTTTGTCTGTCATTCGCTGACTCTTTGTCACCCCGT  450

seq1  AACTAGAGACCCATTCTATGCAGACAGGGAACAAAAAGGGTCTGCGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAGACCCATTCTATGCAGACAGGGAACAAAAAGGGTCTGCGGCAG  500

seq1  GGGACTAGTTTAAGAACTTAGGACAAAAGCTGGTGTGAGGTATA-GGGAG  549
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGGACTAGTTTAAGAACTTAGGACAAAAGCTGGTGTGAGGTATAGGGGAG  550

seq1  GGAAACACAACTGTCAGTCCAGTAGGGCACCCAAATATGAGATGTCTGGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACACAACTGTCAGTCCAGTAGGGCACCCAAATATGAGATGTCTGGC  600

seq1  ACATCCTCACACTCTCAAGTCATTTCTTCCTGCAGAGC-TTCCAGGCAGG  648
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACATCCTCACACTCTCAAGTCATTTCTTCCTGCAGAGCTTTCCAGGCAGG  650

seq1  ACTAAGAGATACTAAGAAACAAGGAAAT-ATAAATCTCTTCTGATG-TCC  696
      |||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  ACTAAGAGATACTAAGAAACAAGGAAATAATAAATCTCTTCTGATGTTCC  700

seq1  TTGGTCTCCAAAAGAAACATTC-TCAGACCTTT--GGAGCCTAGCATATT  743
      |||||||||||||||||||||| ||||||||||  |||| ||||||||||
seq2  TTGGTCTCCAAAAGAAACATTCTTCAGACCTTTTGGGAG-CTAGCATATT  749

seq1  AGAACGCATGCTCAAAG-ATCATGAT-GTGTCATATGTTAAAATACAAAA  791
      ||||||||||||||||| |||||||| ||||||||||||  |||||    
seq2  AGAACGCATGCTCAAAGAATCATGATGGTGTCATATGTT-GAATAC----  794

seq1  CAAAAATGCTGTTAAAATG-TCTCTAGATGG  821
       |   |||||||  ||||| ||||| |||||
seq2  TACTGATGCTGT--AAATGTTCTCT-GATGG  822