BAC Information

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BAC

Clone NameB6Ng01-330D21
ChromosomeX (Build37)
Map Location 129,649,878 - 129,651,006
singlet/doubletsinglet
Overlap genenone
Upstream geneEG631264, LOC665846, LOC665850, LOC665854
Downstream geneLOC100040794, Pcdh19, LOC100040831, Tnmd, Tspan6, Srpx2, Sytl4, LOC665889, Cstf2, Nox1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330D21.bB6Ng01-330D21.g
ACCGA116978GA116979
length1,1271,101
definitionB6Ng01-330D21.b B6Ng01-330D21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtgggat
gacagagtttttatctcaaccttatattaattattaaagagggtcattct
ttaaagatttctgaacactgattgacatgcagtgagctctaacaaccctg
tgctgctatgatgatgatgatgatacctggtcaacaatatagaaactgca
tttgattactttaaatgaaatttagaaagttatagtcaaatctggaaaaa
aagaggacaggtctttttaagttatagctaaacagcatgctttttacatt
catgtcatgatccaatccactttgtacctcaacttgcagtctctcagagt
cagacaatagcttcctgttcctttcatcatttatgcatagtgtcactgtt
tttcccaaaatgaactagtgtacttttcactcaaatgactattttcttgg
caagtgggttactaagaattgcctaaggctagaaggagattttgagaagg
aataatatacacatcaagaatttcaggtaatgaaagcttcatagctagga
actacttttcatggaaccagaaggtgctatagaaccttccaaaagagaaa
accagccaacggttctacttagctatgatgccaatgaaccataacaagag
tgcacatggcaccattaaccttaatggtacaatagctagacacataccct
gataggaaccattttctaattgaacctcatttcaggaagaagcccatacc
tagagctggaaacctagtgaactgcccaaaggcagtcatggttcttgaaa
ggaaaatatccaactgctacttttactaactcaaaataatctctaagcat
attgaaacatctataaatctacccacaattagatagctccacccatcatc
aagaaaactttctttacaacacaatgagacagaaaaacacaactgataaa
atgcagagaacaatagaccatgcgataacacatctcatgtattgcatcta
caacacaacttctgtatctaggactca

gaattctctgtttatctctgtacctcatttttaaaattgagttatttggt
ttttggagtctaactttttgagcttgttctatattttgaatattagccct
ctatacagaggatgtagcattagtgaggatcttttctcaatctgttgtgt
gccatttcgtcctattaacagtgtcctttgccttacagaagctttgcagt
ttcatgaagtcccatttatcaactgttgatcttgaggcctgaagtattgg
agttatggtcaggaaattgtctcctataccaatgagttcaaagctctttc
tcactttatcttctattaggtttaatgtatctgtttatatattgaggtcc
tttaatccacttggacttaagtttgtgcagggtaatagtaaatatggatc
tatttgcatacttcttcatgcagacatccagctagaccagcatcattgga
tggagatgttttcttttttccattgtatggttttgggttctttggtgaaa
atcaagggtccttagatctgtgggcatatttttaggtcttctattctatt
ccattgatcaacctgtctttctgtaccaatgccatgtagtttttatcaat
actgctctatagcacagcttgaggtctggaatggtgattcctaaataaat
tcttttattatttaagatggttttgtctatgctgagtttttactttttcg
atatgaagttgagaatttttctttttaagtctgtaaacatgtgttggaat
tttgatagagattgtattaaatatgtagattgctttttgataaagattgg
gcattttcactatgttaatcctacccattttcgtgagcattggaggtctt
tccatcttcttatacctttcagtttctttcctcgggaacttgaagttcct
tattgtaaaatcttttacttgcttgtttagagttatacagattattttat
aatatttgtggctattgtgaacgtggttttttcctctaatttctttttcc
tgcatgataatcagtagtataaaggaaggtttgatgattcattcagttag
tttttattcttggccaactttgacagaggttgtactgctaagcctacagg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_129649878_129651006
seq2: B6Ng01-330D21.b_45_1171

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGGAT  150

seq1  GACAGAGTTTTTATCTCAACCTTATATTAATTATTAAAGAGGGTCATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGTTTTTATCTCAACCTTATATTAATTATTAAAGAGGGTCATTCT  200

seq1  TTAAAGATTTCTGAACACTGATTGACATGCAGTGAGCTCTAACAACCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATTTCTGAACACTGATTGACATGCAGTGAGCTCTAACAACCCTG  250

seq1  TGCTGCTATGATGATGATGATGATACCTGGTCAACAATATAGAAACTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTATGATGATGATGATGATACCTGGTCAACAATATAGAAACTGCA  300

seq1  TTTGATTACTTTAAATGAAATTTAGAAAGTTATAGTCAAATCTGGAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTACTTTAAATGAAATTTAGAAAGTTATAGTCAAATCTGGAAAAA  350

seq1  AAGAGGACAGGTCTTTTTAAGTTATAGCTAAACAGCATGCTTTTTACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGACAGGTCTTTTTAAGTTATAGCTAAACAGCATGCTTTTTACATT  400

seq1  CATGTCATGATCCAATCCACTTTGTACCTCAACTTGCAGTCTCTCAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCATGATCCAATCCACTTTGTACCTCAACTTGCAGTCTCTCAGAGT  450

seq1  CAGACAATAGCTTCCTGTTCCTTTCATCATTTATGCATAGTGTCACTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAATAGCTTCCTGTTCCTTTCATCATTTATGCATAGTGTCACTGTT  500

seq1  TTTCCCAAAATGAACTAGTGTACTTTTCACTCAAATGACTATTTTCTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAAAATGAACTAGTGTACTTTTCACTCAAATGACTATTTTCTTGG  550

seq1  CAAGTGGGTTACTAAGAATTGCCTAAGGCTAGAAGGAGATTTTGAGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGGTTACTAAGAATTGCCTAAGGCTAGAAGGAGATTTTGAGAAGG  600

seq1  AATAATATACACATCAAGAATTTCAGGTAATGAAAGCTTCATAGCTAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATACACATCAAGAATTTCAGGTAATGAAAGCTTCATAGCTAGGA  650

seq1  ACTACTTTTCATGGAACCAGAAGGTGCTATAGAACCTTCCAAAAGAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTTCATGGAACCAGAAGGTGCTATAGAACCTTCCAAAAGAGAAA  700

seq1  ACCAGCCAACGGTTCTACTTAGCTATGATGCCAATGAACCATAACAAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCCAACGGTTCTACTTAGCTATGATGCCAATGAACCATAACAAGAG  750

seq1  TGCACATGGCACCATTAACCTTAATGGTACAATAGCTAGACACATACCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATGGCACCATTAACCTTAATGGTACAATAGCTAGACACATACCCT  800

seq1  GATAGGAACCATTTTCTAATTGAACCTCATTTCAGGAAGAAGCCCATACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGAACCATTTTCTAATTGAACCTCATTTCAGGAAGAAGCCCATACC  850

seq1  TAGAGCTGGAAACCTAGTGAACTGCCC-AAGGCAGTCATGGTTCTTG-AA  898
      ||||||||||||||||||||||||||| ||||||||||||||||||| ||
seq2  TAGAGCTGGAAACCTAGTGAACTGCCCAAAGGCAGTCATGGTTCTTGAAA  900

seq1  GGAAAATATCCAACTGCTACTTTTACTAACTCAAAATAATCTCTAAGCAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATATCCAACTGCTACTTTTACTAACTCAAAATAATCTCTAAGCAT  950

seq1  ATTTGAAACATCTATAAATCTACCCACAAATTAGGATAGCTCCACCCATC  998
      | ||||||||||||||||||||||||| ||||| ||||||||||||||||
seq2  A-TTGAAACATCTATAAATCTACCCAC-AATTA-GATAGCTCCACCCATC  997

seq1  ATCAAGGAAAACTTTCTTTACAACACAATGGAGACAG-AAAACACAACTG  1047
      ||||| ||||||||||||||||||||||| ||||||| ||||||||||||
seq2  ATCAA-GAAAACTTTCTTTACAACACAAT-GAGACAGAAAAACACAACTG  1045

seq1  ATAAAATGCAGAGAACAATAGACCATGCGAT-ACACATTCTCATGTATTG  1096
      ||||||||||||||||||||||||||||||| ||||| ||||||||||||
seq2  ATAAAATGCAGAGAACAATAGACCATGCGATAACACA-TCTCATGTATTG  1094

seq1  CATCTACAACACAACTCCTGTATCTAAGACTCA  1129
      |||||||||||||||| ||||||||| ||||||
seq2  CATCTACAACACAACTTCTGTATCTAGGACTCA  1127


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