BAC Information

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BAC

Clone NameB6Ng01-331N10
ChromosomeX (Build37)
Map Location 64,107,593 - 64,108,751
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC671840, Slitrk2, LOC666824
Downstream geneLOC627734, EG666828, Gm1140, LOC666842, LOC619873
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331N10.bB6Ng01-331N10.g
ACCGA118104GA118105
length1,2091,155
definitionB6Ng01-331N10.b B6Ng01-331N10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcttgcacttgcacataaggcttgtttactagttaggcgcag
tggaagccagcaccatcttataatggcgattgctcacggcacggctctcc
acaaaccaccactttattataccatcctaacccataactacattctaacc
attgtcattaaaatcacagataaagttagcaacacagagagaaaaggaga
ctattacagaaaactaaaaccaatcaaattgcagagttgaggattccagt
cccagtggacctaatactcaggcgacattgcagaagaggtgccagaaaga
ttattagacccagagtatctggaagtttgctgtgggactgtgtctcttaa
taatgacagatgctacacccatgactgccaaaaattgagctgaagaaaga
ataaaataggcatgccagagtagatggagaaaagcccacaagtcttccac
tctacatgaagaaaaaatgaaggccatgaaggaattctgagactgaagaa
atagttttcttcactgaagataattccaattagtgatctaatacctggat
ttcaggtcatgccaggaatatacatatatatgtaaaaacaattcaaataa
agaggatatgaatttggaagaggataatgaggggcatatgagatgatttg
gagggaagaaagagcataaagaaatggtgccaacaggggaaaaattcctg
aatagaacagcaatggcttgtgctgtaagatcgagaattgacaaatggga
cctcatgaaactgcaaagcttctgtaaggcaaaggacactgtcaataaga
caaaaagaccaccaacagactgggaaaggatctttacctatcctaaatca
gatagggggactaatatcccaatatatataaagaactgaagaaggtagac
tttcagaaaatcagataaccccatttaaaaaatggagctcagagctaaac
aaagaatttctcaacctgagtaatactgaatggatgagaagcacctgaaa
aaattgttcagcattccttaatcatcatggaatgccaaattcaaaaccac
ccctgaagattcgaaccttcaccacccagtcagatgttctaggaatcaaa
agtcaagggtgacttgcagattgcctgtacgaagcaatgctgagaagagt
ccactccttcattggcttgtgtgggtaatgtcgaagcgtgtattactaac
tcaactctg

gaattcttcttttcttagcctgctagttcaccagaacaaattaagattaa
ccagaatacctcatgaaatttaatgagttcatttctgacttgccatttca
attaaacgacatataggtaataggtagaaatatgatttctgctttgtttt
aatgtaaataattcagcattcagtatgatcttctctggttagaaatggag
acggactcctcagggctgtttcaccattgatgccaaatttctccttggga
actacttcaagttttgtaaagtatatgattttcaaattagtacaatatac
atttcagtatactttcaggtctaagagaggcctattagacactacttagt
cttgagaaccaaaactacttgggaaaatgcattatgaaaaatgtcttcca
aggtagactttttttcaatatccatagttataaatatggacgactatttt
tttatatcttccaaatagtagaacacaagcttttagaattatgattctat
ttcaaggtattaaaatacaaaagaggaatcaattgtgaatccaaacaaga
aaaaaataatgcttccagtttgtgtcatgtggctttgttttcaggtactg
ttttgaacaaaagaaccttactaaaataattagcattgttcttttggttc
aaaaatgcattaaattatttatattcagtatgtgttattttacttaaagg
tggtattaattcaagtctgtgtaacaaggaaacaggagaaaaggagaaag
aagtggcagagcctccaacacctccctccctctagcttttttctccctct
caaaaatatcaccactaccacttgcaggagaaacagcaacatgaatgaaa
taccaaaaactgaaactcaaaatcaagaaactggaaaaataaataaatca
cagtttgtttttttaagaaaacttagtttaagttttgcctcatatttccc
ttgtctaatgtttcaaagtatttctaaagtctaacatctatgaaatttgg
aatataaagttaaaataataattgccttttgatagttattttctgagcac
ttcttgattggaaggtatcatgccttccagtgtgaaacattaagtcatga
tcattcatgtggctggacattttccaattcatgacataatctttatctgt
agaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_64107593_64108751
seq2: B6Ng01-331N10.g_69_1223 (reverse)

seq1  TTTCTACAGATAAAAATATATGTCATGATTAGAAAATATGCTCAG-CACA  49
      |||||||||||||| || |||||||||| | | ||| |||  ||| ||||
seq2  TTTCTACAGATAAAGAT-TATGTCATGAATTGGAAA-ATGTCCAGCCACA  48

seq1  TGAAATGACCCATGAC-TAATGTTTCACACT-GAAAGCATGATACTTTCC  97
      || |||||  |||||| |||||||||||||| ||| ||||||||| ||||
seq2  TG-AATGA-TCATGACTTAATGTTTCACACTGGAAGGCATGATACCTTCC  96

seq1  AATCAAGAAGTTGCTTCAG-AAATAACTAATCAAAAGGGCAATTATTATT  146
      |||||||||| ||| |||| |||||||| ||||||| |||||||||||||
seq2  AATCAAGAAG-TGC-TCAGAAAATAACT-ATCAAAA-GGCAATTATTATT  142

seq1  TTACTTTTATATTCCAAATTTCATAGATGTTAGACTTTAGAAATACTTTG  196
      |||  |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTATATTCCAAATTTCATAGATGTTAGACTTTAGAAATACTTTG  192

seq1  AAACATTAGACAA-GGAAATATGAGGCAAAACTTAAACTAAGTTTTCTTA  245
      ||||||||||||| ||||||||||||||||||||||||||||||||||| 
seq2  AAACATTAGACAAGGGAAATATGAGGCAAAACTTAAACTAAGTTTTCTT-  241

seq1  AAAAAAACAAACTGTGATTTATTTATTTTTCCAGTTTCTTGATTTTGAGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACAAACTGTGATTTATTTATTTTTCCAGTTTCTTGATTTTGAGT  291

seq1  TTCAGTTTTTGGTATTTCATTCATGTTGCTGTTTCTCCTGCAAGTGGTAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTTTGGTATTTCATTCATGTTGCTGTTTCTCCTGCAAGTGGTAG  341

seq1  TGGTGATATTTTTGAGAGGGAGAAAAAAGCTAGAGGGAGGGAGGTGTTGG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATATTTTTGAGAGGGAGAAAAAAGCTAGAGGGAGGGAGGTGTTGG  391

seq1  AGGCTCTGCCACTTCTTTCTCCTTTTCTCCTGTTTCCTTGTTACACAGAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTGCCACTTCTTTCTCCTTTTCTCCTGTTTCCTTGTTACACAGAC  441

seq1  TTGAATTAATACCACCTTTAAGTAAAATAACACATACTGAATATAAATAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTAATACCACCTTTAAGTAAAATAACACATACTGAATATAAATAA  491

seq1  TTTAATGCATTTTTGAACCAAAAGAACAATGCTAATTATTTTAGTAAGGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGCATTTTTGAACCAAAAGAACAATGCTAATTATTTTAGTAAGGT  541

seq1  TCTTTTGTTCAAAACAGTACCTGAAAACAAAGCCACATGACACAAACTGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTTCAAAACAGTACCTGAAAACAAAGCCACATGACACAAACTGG  591

seq1  AAGCATTATTTTTTTCTTGTTTGGATTCACAATTGATTCCTCTTTTGTAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTATTTTTTTCTTGTTTGGATTCACAATTGATTCCTCTTTTGTAT  641

seq1  TTTAATACCTTGAAATAGAATCATAATTCTAAAAGCTTGTGTTCTACTAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATACCTTGAAATAGAATCATAATTCTAAAAGCTTGTGTTCTACTAT  691

seq1  TTGGAAGATATAAAAAAATAGTCGTCCATATTTATAACTATGGATATTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGATATAAAAAAATAGTCGTCCATATTTATAACTATGGATATTGA  741

seq1  AAAAAAGTCTACCTTGGAAGACATTTTTCATAATGCATTTTCCCAAGTAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTCTACCTTGGAAGACATTTTTCATAATGCATTTTCCCAAGTAG  791

seq1  TTTTGGTTCTCAAGACTAAGTAGTGTCTAATAGGCCTCTCTTAGACCTGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTCTCAAGACTAAGTAGTGTCTAATAGGCCTCTCTTAGACCTGA  841

seq1  AAGTATACTGAAATGTATATTGTACTAATTTGAAAATCATATACTTTACA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATACTGAAATGTATATTGTACTAATTTGAAAATCATATACTTTACA  891

seq1  AAACTTGAAGTAGTTCCCAAGGAGAAATTTGGCATCAATGGTGAAACAGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGAAGTAGTTCCCAAGGAGAAATTTGGCATCAATGGTGAAACAGC  941

seq1  CCTGAGGAGTCCGTCTCCATTTCTAACCAGAGAAGATCATACTGAATGCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGAGTCCGTCTCCATTTCTAACCAGAGAAGATCATACTGAATGCT  991

seq1  GAATTATTTACATTAAAACAAAGCAGAAATCATATTTCTACCTATTACCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATTTACATTAAAACAAAGCAGAAATCATATTTCTACCTATTACCT  1041

seq1  ATATGTCGTTTAATTGAAATGGCAAGTCAGAAATGAACTCATTAAATTTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCGTTTAATTGAAATGGCAAGTCAGAAATGAACTCATTAAATTTC  1091

seq1  ATGAGGTATTCTGGTTAATCTTAATTTGTTCTGGTGAACTAGCAGGCTAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTATTCTGGTTAATCTTAATTTGTTCTGGTGAACTAGCAGGCTAA  1141

seq1  GAAAAGAAGAATTC  1159
      ||||||||||||||
seq2  GAAAAGAAGAATTC  1155


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