BAC Information

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BAC

Clone NameB6Ng01-331P21
ChromosomeX (Build37)
Map Location 115,071,944 - 115,073,111
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039319, LOC624284, LOC665066, EG624388
Downstream geneENSMUSG00000072994, LOC100039551, Tgifx1, LOC665087
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331P21.bB6Ng01-331P21.g
ACCGA118220GA118221
length1,1801,089
definitionB6Ng01-331P21.b B6Ng01-331P21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctacagttaaattaattaacctaatttctaaattttaatcaata
aagcccagtaaatgaatagaattacggtttgcaaggaaattagaaaatgt
ccaaaccatttttattctaattatctaaaaccaaacatccttaatgcatt
taaaatatattaaaatgatatatacttcttaaagttacttttttccataa
aattaaaaatggcaggtagacatcaactacaagacagtagtacccttatc
tccaaatgaagctatatacttagaggctggcctcaaacatcagtttagta
taattattagtcatggctttttaggccatttatggtttcagaacatatca
tgtattatactcataaagtgagtacagtaaattatttcaagtcataataa
tttcaataaaattgttccaattatttctctggatttgaatttaaaatttc
acccaactgaaatatatttcaatttttttgcctgatattgaaaaacagcg
tctggttctggaatgattcttatgaatgaatttttttccttaatcacaac
agggagaatgtaatatattttaccataaacctatataccctcagtgatag
atttatacaatatattcttttatgctttaaatgccaagggaaaactatac
caaattcctttctgaacattcaaacacttagctagcataccataaaatca
gaattcaatcttaaatatacagtagagcttagccagaaatatacctgagc
attcttccaatacttgattacatatttcaacacacacacacacacacaca
cacacacacacacacaatgttattatttttaaaataatgtgtgatctcat
ctcataaccagttacttaatgctaaatctaaacaatttctgttagtgatt
atcttaatcttttgtattcaaatacatggaatcttaagaatgttatctct
acttctttataagaattagtgatttctctgagctccttcctaggagtgaa
tttcatgacactccttaagaataactactttttatttgaaacatgacatt
taattctttcagagctgattgatgaattttcttggtaaattattattcat
taacttttacaggttacaatgtaactggtactaaatttaaaatagaagaa
tgttatggctttcttaacataggtatcatc

gaattctcacctgaggaatatggaatggcagagaagcacctgaaaaaatg
ttcaacatccgtaatcatcagggaaatgcaaattaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgttgaggatgtggagtaagagaaacactcctccattgatggtg
ggattgtaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaagatccagcagtacctcttcagggc
atatatccagatgatgccccaaccggtaattaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacacaga
tgcccctcaaaagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagttaggtaatccaatcacaa
aagaagtcaaatgatatgtactcactgataagtggatattatcccagaaa
cttaatatatcaagatataagatccaatatgctaaatgcatgaaactcca
gaagaactaagaccaaagtgtggacactttgccccttcttagaattggga
ccaaaacacccatggaaggagttacagagacaaattttggagctgtgtcg
aaaggatggaccatctagaacctgcctatatccagggtttcatcccataa
tgagcttctaaacactgacaccattgcacacactagcctgattttgctat
aacgacccagatatagctgtatcttgtgagactatgccgggccctagcaa
acacaaaagtggatgctcacagtcagctattggaaggatcaaaaggcccc
caatggaggagctagagtagtatccaagagctaagggatctgtatcccta
taggtggaatacattatgaacctacagtaccccggaaccctttcactctt
gttcgaaatagtgatcaaaaagatggcctaatacggcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_115071944_115073111
seq2: B6Ng01-331P21.b_47_1226 (reverse)

seq1  GATGATA-CTATGTTAGGAAAG-CAT-ACATCCTTCTATTTTAAAATTTA  47
      ||||||| |||||||| ||||| ||| |||| |||||||||| |||||||
seq2  GATGATACCTATGTTAAGAAAGCCATAACATTCTTCTATTTT-AAATTTA  49

seq1  GTA-CAG-TACATTTGTA--CTGT-AAAGTAAATG-ATAATAATTTACCA  91
      ||| ||| |||| |||||  |||| ||||| |||| ||||||||||||||
seq2  GTACCAGTTACA-TTGTAACCTGTAAAAGTTAATGAATAATAATTTACCA  98

seq1  AG-AAATTCATCAAATCAGCTCTG-AAGA--TTAATGTCATGTTTCAAAT  137
      || ||||||||| ||||||||||| ||||  | |||||||||||||||||
seq2  AGAAAATTCATC-AATCAGCTCTGAAAGAATTAAATGTCATGTTTCAAAT  147

seq1  -AAAAGTAGTTTATCTT-AGGAGTGTCATGAAATTCACTCCTAGGAAGGA  185
       ||||||||||  |||| ||||||||||||||||||||||||||||||||
seq2  AAAAAGTAGTTATTCTTAAGGAGTGTCATGAAATTCACTCCTAGGAAGGA  197

seq1  GCTCAGAGAAATCACTAATTCTTATAAAGAAGTAGAGATAACATTCTTAA  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAGAAATCACTAATTCTTATAAAGAAGTAGAGATAACATTCTTAA  247

seq1  GATTCCATGTATTTGAATACAAAAGATTAAGATAATCACTAACAGAAATT  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCATGTATTTGAATACAAAAGATTAAGATAATCACTAACAGAAATT  297

seq1  GTTTAGATTTAGCATTAAGTAACTGGTTATGAGATGAGATCACACATTAT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGATTTAGCATTAAGTAACTGGTTATGAGATGAGATCACACATTAT  347

seq1  TTTAAAAATAATAACATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATAATAACATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  397

seq1  GTGTTGAAATATGTAATCAAGTATTGGAAGAATGCTCAGGTATATTTCTG  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGAAATATGTAATCAAGTATTGGAAGAATGCTCAGGTATATTTCTG  447

seq1  GCTAAGCTCTACTGTATATTTAAGATTGAATTCTGATTTTATGGTATGCT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGCTCTACTGTATATTTAAGATTGAATTCTGATTTTATGGTATGCT  497

seq1  AGCTAAGTGTTTGAATGTTCAGAAAGGAATTTGGTATAGTTTTCCCTTGG  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGTGTTTGAATGTTCAGAAAGGAATTTGGTATAGTTTTCCCTTGG  547

seq1  CATTTAAAGCATAAAAGAATATATTGTATAAATCTATCACTGAGGGTATA  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAGCATAAAAGAATATATTGTATAAATCTATCACTGAGGGTATA  597

seq1  TAGGTTTATGGTAAAATATATTACATTCTCCCTGTTGTGATTAAGGAAAA  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTATGGTAAAATATATTACATTCTCCCTGTTGTGATTAAGGAAAA  647

seq1  AAATTCATTCATAAGAATCATTCCAGAACCAGACGCTGTTTTTCAATATC  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATTCATAAGAATCATTCCAGAACCAGACGCTGTTTTTCAATATC  697

seq1  AGGCAAAAAAATTGAAATATATTTCAGTTGGGTGAAATTTTAAATTCAAA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAAAAATTGAAATATATTTCAGTTGGGTGAAATTTTAAATTCAAA  747

seq1  TCCAGAGAAATAATTGGAACAATTTTATTGAAATTATTATGACTTGAAAT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGAAATAATTGGAACAATTTTATTGAAATTATTATGACTTGAAAT  797

seq1  AATTTACTGTACTCACTTTATGAGTATAATACATGATATGTTCTGAAACC  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACTGTACTCACTTTATGAGTATAATACATGATATGTTCTGAAACC  847

seq1  ATAAATGGCCTAAAAAGCCATGACTAATAATTATACTAAACTGATGTTTG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGGCCTAAAAAGCCATGACTAATAATTATACTAAACTGATGTTTG  897

seq1  AGGCCAGCCTCTAAGTATATAGCTTCATTTGGAGATAAGGGTACTACTGT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCCTCTAAGTATATAGCTTCATTTGGAGATAAGGGTACTACTGT  947

seq1  CTTGTAGTTGATGTCTACCTGCCATTTTTAATTTTATGGAAAAAAGTAAC  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGTTGATGTCTACCTGCCATTTTTAATTTTATGGAAAAAAGTAAC  997

seq1  TTTAAGAAGTATATATCATTTTAATATATTTTAAATGCATTAAGGATGTT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAAGTATATATCATTTTAATATATTTTAAATGCATTAAGGATGTT  1047

seq1  TGGTTTTAGATAATTAGAATAAAAATGGTTTGGACATTTTCTAATTTCCT  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTAGATAATTAGAATAAAAATGGTTTGGACATTTTCTAATTTCCT  1097

seq1  TGCAAACCGTAATTCTATTCATTTACTGGGCTTTATTGATTAAAATTTAG  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACCGTAATTCTATTCATTTACTGGGCTTTATTGATTAAAATTTAG  1147

seq1  AAATTAGGTTAATTAATTTAACTGTAGGAATTC  1168
      |||||||||||||||||||||||||||||||||
seq2  AAATTAGGTTAATTAATTTAACTGTAGGAATTC  1180


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