BAC Information

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BAC

Clone NameB6Ng01-332C05
ChromosomeX (Build37)
Map Location 110,208,283 - 110,209,485
singlet/doubletsinglet
Overlap geneChm
Upstream geneTex16, LOC622570, 4933403O08Rik, EG385407, Apool, Satl1, EG623341, 2010106E10Rik, Zfp711, Pof1b, LOC623412, EG623428, LOC100039112
Downstream geneEG664918, Dach2, LOC237016, EG664945
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332C05.bB6Ng01-332C05.g
ACCGA118325GA118326
length1,1871,178
definitionB6Ng01-332C05.b B6Ng01-332C05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagtgagaatttctcacttctctcattataatagaagttaaga
acgcagaaattgtttcaggaaaacaggaaaaattcaaatttagagattgg
ttcagttattaagctgccactacaattaagagctgaaagaaaatacacaa
agcaacataatatccatccaatatattcttcagatgattgtgtatatttg
gagtacatccgaaccctttgatgttattaaccccaaagaacggacagtaa
agtaatataagcttaattagtagagtacagttccaacaatgagtcagatt
ttactgaaactgcctaccaacattggactgaatttcaactttgccctggt
gacatcaaatagtattatagatcaattaagagtcatgaaacattttggct
tgtagccctcatcgtacatagcctttaaaaaagcaatttcagttcctatc
aaggtaggaatcagcagttgtaattttttaatacagctgcaaaacaatag
gacccattaatagctgaacttttgacagcactattcaagatgatttatga
gtttgtatataatttgattattctattaattctgctgattactgcttcag
ctaataaagtgaaggtcacttctaaaataaatcttcattacatttcacag
aaagtaactgcctccaactagttgttttctttaattaaaaactaatgtaa
caagaaagaagataggcttcagggtcattcatctgttgtactgtgtggat
ataatatacacaagacaagtccagtgtaatacaaagtatcccttcatcaa
ataccttacttacaaaagcattatatttatttatactaatactgaaatta
taaaactcaactgtattaagtgttttaaaatgaaaaacatacaaagaata
tctgaaaatagtccctaaacacatattataaaatgtaaagtagtgttttc
acttctaaaactatgtatgtgcggttctgcacgggagaagaacagcgggt
cactgctttaaccacatctttcctgaggtagaaaggagactgttctatgc
tccataagatagtaatgggcacaggccctgagaaggttggagagaagaat
cagaggaaaatgtcaggctcaaattaatacatatctatgatctattttac
accaagaacatctggtctaattaatgctcattatatt

gaattctcacctgaggaataccgaaaggctgagaaacacctgaaaaaaat
gttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgaga
ttccatctcacacaagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctagcggttcctc
agaaaattggacatagtactaccggaggatcccgcaatacctctcctggg
catatatccagaagatgtcccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctgtaaagaacccaga
tgcccctcaacagaggaatggatacaaaaaatgtgttacatttacacaat
ggagtactactcagctattaaaaagaatgaatttaggaaattcctaggca
aatggatggacccggagggcatcatcctgagtgaggtaacccaatcacaa
aagaactcaaatgaaatgtactcactgataagtggatattagcccagaca
cttagtgtagcgagatatacggtacaagatgcaaaacacatgaaactgaa
gaagaaggaagatcaaagtgtggacactttgctccttcttagaattggaa
acaatcacccatggaaggagttacagagacaaagtttcgagctgagacaa
aaggatagaccatctagagactgccgtatccagggatccatcccataatt
agcctccaaacgctgacaccatggcatacactagcaagcctttgttacaa
ggaccgtgatatagctgtctcttgtgagactaggccggggcctagcaaac
acagaagtggattctcacagtcaactattggctggatcacagggccctca
atggaggagctagagaaagtatcccaggagctaaagagattatgcaaccc
tataagtgaaacaacagtatgaactaaccagtacccagagcttcttgact
ctagctgagtatgtatcaaagatggctagtcggcatcatggaagaagagc
ccatgttcagcacttatatgccccagtacagggctacgcagggcaaaaat
ggaaagtgttgggatagggggagatggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_110208283_110209485
seq2: B6Ng01-332C05.b_45_1231

seq1  GAATTCTCAGTGAGAATTTCTCACTTCTCTCATTATAATAGAAGTTAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTGAGAATTTCTCACTTCTCTCATTATAATAGAAGTTAAGA  50

seq1  ACGCAGAAATTGTTTCAGGAAAACAGGAAAAATTCAAATTTAGAGATTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAGAAATTGTTTCAGGAAAACAGGAAAAATTCAAATTTAGAGATTGG  100

seq1  TTCAGTTATTAAGCTGCCACTACAATTAAGAGCTGAAAGAAAATACACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTATTAAGCTGCCACTACAATTAAGAGCTGAAAGAAAATACACAA  150

seq1  AGCAACATAATATCCATCCAATATATTCTTCAGATGATTGTGTATATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACATAATATCCATCCAATATATTCTTCAGATGATTGTGTATATTTG  200

seq1  GAGTACATCCGAACCCTTTGATGTTATTAACCCCAAAGAACGGACAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACATCCGAACCCTTTGATGTTATTAACCCCAAAGAACGGACAGTAA  250

seq1  AGTAATATAAGCTTAATTAGTAGAGTACAGTTCCAACAATGAGTCAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATATAAGCTTAATTAGTAGAGTACAGTTCCAACAATGAGTCAGATT  300

seq1  TTACTGAAACTGCCTACCAACATTGGACTGAATTTCAACTTTGCCCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAAACTGCCTACCAACATTGGACTGAATTTCAACTTTGCCCTGGT  350

seq1  GACATCAAATAGTATTATAGATCAATTAAGAGTCATGAAACATTTTGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAAATAGTATTATAGATCAATTAAGAGTCATGAAACATTTTGGCT  400

seq1  TGTAGCCCTCATCGTACATAGCCTTTAAAAAAGCAATTTCAGTTCCTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCCTCATCGTACATAGCCTTTAAAAAAGCAATTTCAGTTCCTATC  450

seq1  AAGGTAGGAATCAGCAGTTGTAATTTTTTAATACAGCTGCAAAACAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGGAATCAGCAGTTGTAATTTTTTAATACAGCTGCAAAACAATAG  500

seq1  GACCCATTAATAGCTGAACTTTTGACAGCACTATTCAAGATGATTTATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCATTAATAGCTGAACTTTTGACAGCACTATTCAAGATGATTTATGA  550

seq1  GTTTGTATATAATTTGATTATTCTATTAATTCTGCTGATTACTGCTTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTATATAATTTGATTATTCTATTAATTCTGCTGATTACTGCTTCAG  600

seq1  CTAATAAAGTGAAGGTCACTTCTAAAATAAATCTTCATTACATTTCACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAAGTGAAGGTCACTTCTAAAATAAATCTTCATTACATTTCACAG  650

seq1  AAAGTAACTGCCTCCAACTAGTTGTTTTCTTTAATTAAAAACTAATGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAACTGCCTCCAACTAGTTGTTTTCTTTAATTAAAAACTAATGTAA  700

seq1  CAAGAAAGAAGATAGGCTTCAGGGTCATTCATCTGTTGTACTGTGTGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAGAAGATAGGCTTCAGGGTCATTCATCTGTTGTACTGTGTGGAT  750

seq1  ATAATATACACAAGACAAGTCCAGTGTAATACAAAGTATCCCTTCATCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATACACAAGACAAGTCCAGTGTAATACAAAGTATCCCTTCATCAA  800

seq1  ATACCTTACTTACAAAAGCATTATATTTATTTATACTAATACTGAAATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTACTTACAAAAGCATTATATTTATTTATACTAATACTGAAATTA  850

seq1  TAAAACTCAACTGTATTAAGTGTTTTAAAATGAAAAACATACAAAGAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCAACTGTATTAAGTGTTTTAAAATGAAAAACATACAAAGAATA  900

seq1  TCTGAAAATAGTCCCTAAACACATATTATAAAATGTAAAGTAGTGTTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAATAGTCCCTAAACACATATTATAAAATGTAAAGTAGTGTTTTC  950

seq1  ACTTCTAAAACTATGTATGTGCGGTTCTGCACGGGGAGAAGGAACAGCGG  1000
      |||||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  ACTTCTAAAACTATGTATGTGCGGTTCTGCAC-GGGAGAA-GAACAGCGG  998

seq1  GTCACTGCTTTAACCACATCTTTCCTGGAGGTAGAAA-GAGACTG-TCTA  1048
      |||||||||||||||||||||||||| |||||||||| ||||||| ||||
seq2  GTCACTGCTTTAACCACATCTTTCCT-GAGGTAGAAAGGAGACTGTTCTA  1047

seq1  TGCTCCATAAGATAAGTAATGGGCACAGGGCCCTGAG-AGGTTGGAGAGA  1097
      ||||||||||||| ||||||||||||| ||||||||| ||||||||||||
seq2  TGCTCCATAAGAT-AGTAATGGGCACA-GGCCCTGAGAAGGTTGGAGAGA  1095

seq1  --GATCAGAGGAAAAAATGGTCAGGGCTCATATTAATACATTATTCTTAT  1145
         ||||||||||||    |||| |||||| ||||||||||      | |
seq2  AGAATCAGAGGAAAA---TGTCA-GGCTCAAATTAATACAT-----ATCT  1136

seq1  TTAATCTATTTTTACACACAGAACATTCTGTGTCCTAGATTTAATGCTTC  1195
       | ||||| ||||||||  |||||| |||| |||    | ||||||| ||
seq2  ATGATCTA-TTTTACACCAAGAACA-TCTG-GTC---TAATTAATGC-TC  1179

seq1  ATTTTATT  1203
      ||| ||||
seq2  ATTATATT  1187


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