BAC Information

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BAC

Clone NameB6Ng01-332M04
ChromosomeX (Build37)
Map Location 31,463,701 - 31,464,660
singlet/doubletsinglet
Overlap genenone
Upstream geneEG546176, LOC100040482, LOC629997, 1700017G21Rik, LOC665014, EG546205, LOC100040533, LOC100039328, LOC100040552, LOC100040575, LOC100040585, LOC100039362, LOC100040606, LOC100040612
Downstream geneLOC673784, LOC100040650, LOC100040662, LOC100039419, LOC100039429, LOC100040698, LOC630028, LOC100040722, LOC100040732, LOC100040743, LOC385298, LOC100039460, LOC100040781, LOC100039515, LOC100039522, LOC100039473
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332M04.bB6Ng01-332M04.g
ACCGA118770GA118771
length1,210976
definitionB6Ng01-332M04.b B6Ng01-332M04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggtttgctgagttaaagagataaacagcccttcgtatataaa
aaagagaacaatcttacatggccttggatgctcttaagactgccctgatg
ttatccccagctatgggactcctagatgtgactgagaacaaaggtattgc
caaaagaagttcttactcagagattgggaccctggaaaaagacctgtggc
atacttgtaaaaaattagacctggtggctgtaggatggcctgcttgtctg
cacatagtggcttctggtcaaggacgcagataaattgactctgagacaaa
acttggcacatgtcctagaaagtgtggttcagcccccatgaccgatggct
gactaacgctcttaaaagcattatccaactgttcccctgacggatggaca
cattgtcagagctttttgttgactgaacgagtgaccttcgctccccctgc
tatcctcaatctcactactgcctgagacttcacctactcatcattgtgct
gacattctggcagaaggaactcatactcgaaatgatctaaaggatcagat
cagccttggcctgagagtttgagctggtacacggatggcagtagcctgga
ggttgaaggtaagcggaaggcggggacagcagtgcagtggtggacagaaa
gcaagtgatctaggccagcagcctccctaaagggacttcagcccagaaag
ctaaacttgtggctttaatacaagctctataaatggtaaaaaaaaaaaag
tctacacggacagcacgtatgctcttgccactgtacagagcaatatacag
acaaagagaactgttgacatctgcagagaaagatcctaaaatgctgtggc
taaaaaaatcagatggtaaatctaaccgcccaggcatcctaaagagcaat
gatcctgacagtctgaagactatcaagttatagacaaattaagactggta
aaagaaaccctgtataaaatagtagaaactgaaaaaaagaaaactagtcc
tctcatgagagacagacctgacatctactgaaaaatagactttactgaaa
aaatatgtgtataataccttctgatctgtgacgtctcagatggataaagc
tttctataaactgaactgctcgaagtcatcaggagatataaaattcaggt
tcgatgccagccaatgtcagatatggttctgcattggtgccagcttacag
ccaggtgtgt
gaattctcacctgaggaataccaaatgtctgagaagaacctgataaaatg
tccagcatccttagtcatcatggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaatttcaaaaattgaggtgacagc
agatgctggggaggatgtggagaaagaggaacactcctccattgttggtg
ggattgaaagcttgtacaacccctctggaaatcaatctggggggttcctt
agaaaattggacatagtactactggaagatgcagcaatacctctcctctt
cttatatccagaagatgttccaactggtaagaaagacacatgttccatta
tgttcatagcagccttatttataatagccagaagctggaaagaacctaga
tgtccctcaagagaggaatggatacaaaaaatgtggtacatttacacaat
ggagaattgtcatttttaaggtcgtatttaggtgaccatactgttgagat
ttcatgagtgtagtctacttatcacttatttggagcatagatattgattt
tgcattttctttgattgttatgccgatgttctctattgaatcttctgcac
ctgagattctctcttccatctcttatgtttgttgctgatgcttgcatcta
tggttccagatttctttcctagcttttctatctccagcgttgcctcactt
ggtgttttctttttgtgtctacttccctttttaagtcttggatggtttta
ttcaattccattacttgtttggtcctgttttcctgcaattctttaaggga
tttttgtgcttcctttttaaggtcttctacctgtttagctgtgttctcct
gtatttctttacgtgagttattaatgtccttcttgatgtcctctaccatc
atcatgagagatgctattaaatcaggaactatcttttcgggtgtgttggg
gttgcccagataggtgggggtgggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_31463701_31464660
seq2: B6Ng01-332M04.g_83_1041

seq1  ATACCAAATGTCTGAGAAGAACCTGATAAAATGTCCAGCATCCTTAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAATGTCTGAGAAGAACCTGATAAAATGTCCAGCATCCTTAGTCA  50

seq1  TCATGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTC  100

seq1  AGAATGGCTAATTTCAAAAATTGAGGTGACAGCAGATGCTGGGGAGGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGCTAATTTCAAAAATTGAGGTGACAGCAGATGCTGGGGAGGATG  150

seq1  TGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGAAAGCTTGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGAAAGCTTGTAC  200

seq1  AACCCCTCTGGAAATCAATCTGGGGGGTTCCTTAGAAAATTGGACATAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTCTGGAAATCAATCTGGGGGGTTCCTTAGAAAATTGGACATAGT  250

seq1  ACTACTGGAAGATGCAGCAATACCTCTCCTCTTCTTATATCCAGAAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGGAAGATGCAGCAATACCTCTCCTCTTCTTATATCCAGAAGATG  300

seq1  TTCCAACTGGTAAGAAAGACACATGTTCCATTATGTTCATAGCAGCCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACTGGTAAGAAAGACACATGTTCCATTATGTTCATAGCAGCCTTA  350

seq1  TTTATAATAGCCAGAAGCTGGAAAGAACCTAGATGTCCCTCAAGAGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATAGCCAGAAGCTGGAAAGAACCTAGATGTCCCTCAAGAGAGGA  400

seq1  ATGGATACAAAAAATGTGGTACATTTACACAATGGAGAATTGTCATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATGGATACAAAAAATGTGGTACATTTACACAATGGAGAATTGTCA-TTTT  449

seq1  TAAGGTCGTATTTAGGTGACCATACTGTTGAGATTTCATGAGTGTAGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTCGTATTTAGGTGACCATACTGTTGAGATTTCATGAGTGTAGTCT  499

seq1  ACTTATCACTTATTTGGAGCATAGATATTGATTTTGCATTTTCTTTGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATCACTTATTTGGAGCATAGATATTGATTTTGCATTTTCTTTGATT  549

seq1  GTTATGCCGATGTTCTCTATTGAATCTTCTGCACCTGAGATTCTCTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGCCGATGTTCTCTATTGAATCTTCTGCACCTGAGATTCTCTCTTC  599

seq1  CATCTCTTATGTTTGTTGCTGATGCTTGCATCTATGGTTCCAGATTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTTATGTTTGTTGCTGATGCTTGCATCTATGGTTCCAGATTTCTT  649

seq1  TCCTACCTTTTCTATCTCCAGCGTTGCCTCACTTGGGGTTTTCTTTTTGT  700
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  TCCTAGCTTTTCTATCTCCAGCGTTGCCTCACTTGGTGTTTTCTTTTTGT  699

seq1  GTCTACTTCCCTTTTTAAGTCTTGGATGGTTTTATTCAATTCCATTACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACTTCCCTTTTTAAGTCTTGGATGGTTTTATTCAATTCCATTACTT  749

seq1  GTTTGGTCTTGTTTTCCTGCAATTCTTTAAGGGATTTTTGTGCTTCCTTT  800
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTCCTGTTTTCCTGCAATTCTTTAAGGGATTTTTGTGCTTCCTTT  799

seq1  TTAAGGTCTTCTACCTGTTTAGCTGTGTTCTCCTGTATTTCTTTACGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTCTTCTACCTGTTTAGCTGTGTTCTCCTGTATTTCTTTACGTGA  849

seq1  GTTATTAATGTCCTTCTTGATGTCCTCTACCATCATCATGAGAGATGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTAATGTCCTTCTTGATGTCCTCTACCATCATCATGAGAGATGCTA  899

seq1  TTAAATCAGGAACTATCTTTTCGGGTGTGTTGGGG-TGCCCAGGATAGGG  949
      ||||||||||||||||||||||||||||||||||| |||||| |||||| 
seq2  TTAAATCAGGAACTATCTTTTCGGGTGTGTTGGGGTTGCCCA-GATAGGT  948

seq1  TGGGGTGGGAG  960
       ||||||||||
seq2  GGGGGTGGGAG  959