BAC Information

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BAC

Clone NameB6Ng01-334D13
ChromosomeX (Build37)
Map Location 127,479,338 - 127,680,967
singlet/doubletdoublet
Overlap genenone
Upstream geneDiap2, LOC100040092, LOC665773
Downstream geneLOC665799, LOC670449, LOC245600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334D13.bB6Ng01-334D13.g
ACCGA119780GA119781
length1,0981,129
definitionB6Ng01-334D13.b B6Ng01-334D13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,679,870 - 127,680,967)(127,479,338 - 127,480,483)
sequence
gaattcattctgttatatgtttttggcagcttgaaactctatatatttta
gttttgctctattccctaaatgcagattgcttgatggtgtgtaagagagc
taattagatataaataccaaccagcacccaaataacaaggatcataatga
tcatacagtgaacagctgtgccattcaataaattggtttcttttctaata
ctgccccaattcaaacattttccagctccaaaaatgtttttcccttcata
ggccagattcattttttaaaaaacctgctaatgcaggacttcagaagggc
agaaaatttgagattttgtgaacttttgttataaaagctataaacttatt
tttatgactacctttgatttcttgactgatcatatattgtataacagtaa
tgcttataagatgcatgcaagaacaaaatagattaatagtaaatagtcat
ctatatatatgaaatgtatgaaattttgttcttttgctttaaaaaatatt
tatttctttctattttattttggggatgcatgtatgtgcacataccacag
tgtggagtacctgcagaggccatgagagggcaacagatcccatggaactg
gagttttaggtggttgtgagctgccatatggattttgggaaccaaaacct
gatcaaaagcaatggctcttaactactgagccatttctatttagtttgga
ttttaccattttctgttttgatctataattaaaaatggaaggagcatttc
agttttactttagctctatattttatttatttgagtacataagttttagt
acctattttgtatctagtcctatcaaagtgaaaataaatacaagagaaaa
tttcatccatccttcagtgagtgtacagtctagtatggggtggggacaaa
ttcccttcatatcatttaattaagtaaatatagatggtgattttcgttgg
aagagcaaaaagaaattcaggcattgtagaaatccttgaggactagatct
tacctgagaacacatgtatcaggaaattgttttctgaggaagtaatatgt
taactgaaactaagttaagcttatggaaaatagtaacttcatgcttct

gaattcatcctggggatactaagaaggtgggagaaattggaggagggtaa
tgagtgatacttgaattgttgtaattgcagtattcaagttaacatgggat
attttatctcttctgaatcatctccagtcttgtcaacaacaaattagaaa
tttagaatattttatctaatattcattgacatgtttgcttttattataag
caatgagatgatgaagctaaaagaaacttagggtaggtactaacaacaaa
agatcaacaaaccattaactagtatgccacaactagtcatatcatcagct
aagtcacattttttgacgctccattttctcatctattaaaataaaggagt
ttgacatgcctaagctgtattctctttcctttttggttgagtatttgcct
gaatcttcctcgtttgcatatggaatgtggtaaagttgcttaaaatagtc
atattattgaaatagtgtgtacattaatttctttcctactgtgtggtaga
gacccaatcacattctgcatacaactagaaagacttatttagtggaaacc
tgtaacaattctttgtgaagcaaataaacctttgtaatgcaaatgcttgt
atttaatgtttctattttgcaattttccattttgatatatcaagtatgct
tactcccaagtataactaaacattacatgaaaatgaaaattcatacccaa
tatattttttcttctttttagcttggtagaaaaattactttcctttcctg
cacttaactatgctagtcagacattgtgaataactatctgtggtcaaaca
aatggttaaggttttagtctagttctatgactttactgggtggatatctt
atgccagaatttgttgttctgggcatcagttacgtcatctgtacagatag
aacagtaatagttgctatcttgtagtatttgtatagattaaatactataa
aagagacatcttgcttcacctatgtttcacccatagtgtgctatattcca
ctgtatcatgctatctcaaacaaatttcatgtgtgtatctataatatgct
acatagtactatttttcatgattgggctagacccatcgtgatgcataaat
aatgcatctttgtgtgaatcttcaataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_127679870_127680967
seq2: B6Ng01-334D13.b_49_1146 (reverse)

seq1  AGAAGCATGAAGTTACTAATTTTCATAAGCTTAACTTAGTTTCAGTTAAC  50
      |||||||||||||||||| ||| |||||||||||||||||||||||||||
seq2  AGAAGCATGAAGTTACTATTTTCCATAAGCTTAACTTAGTTTCAGTTAAC  50

seq1  ATATTACTTCCTCAGAAAAC-ATTTCCTGATACATGTG-TCTCAGGTAAG  98
      |||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  ATATTACTTCCTCAGAAAACAATTTCCTGATACATGTGTTCTCAGGTAAG  100

seq1  AATCTAGTCCTCAAGGATTTTCTACAATGCCTGAATTTCTTTTTGCTCTT  148
       |||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  -ATCTAGTCCTCAAGGA-TTTCTACAATGCCTGAATTTCTTTTTGCTCTT  148

seq1  CCAACGAAAATCACCATCTATATTTACTTAATTAAATGATATGAAGGGAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACGAAAATCACCATCTATATTTACTTAATTAAATGATATGAAGGGAA  198

seq1  TTTGTCCCCACCCCATACTAGACTGTACACTCACTGAAGGATGGATGAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCCCACCCCATACTAGACTGTACACTCACTGAAGGATGGATGAAA  248

seq1  TTTTCTCTTGTATTTATTTTCACTTTGATAGGACTAGATACAAAATAGGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTTGTATTTATTTTCACTTTGATAGGACTAGATACAAAATAGGT  298

seq1  ACTAAAACTTATGTACTCAAATAAATAAAATATAGAGCTAAAGTAAAACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAACTTATGTACTCAAATAAATAAAATATAGAGCTAAAGTAAAACT  348

seq1  GAAATGCTCCTTCCATTTTTAATTATAGATCAAAACAGAAAATGGTAAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCTCCTTCCATTTTTAATTATAGATCAAAACAGAAAATGGTAAAA  398

seq1  TCCAAACTAAATAGAAATGGCTCAGTAGTTAAGAGCCATTGCTTTTGATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACTAAATAGAAATGGCTCAGTAGTTAAGAGCCATTGCTTTTGATC  448

seq1  AGGTTTTGGTTCCCAAAATCCATATGGCAGCTCACAACCACCTAAAACTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTGGTTCCCAAAATCCATATGGCAGCTCACAACCACCTAAAACTC  498

seq1  CAGTTCCATGGGATCTGTTGCCCTCTCATGGCCTCTGCAGGTACTCCACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCATGGGATCTGTTGCCCTCTCATGGCCTCTGCAGGTACTCCACA  548

seq1  CTGTGGTATGTGCACATACATGCATCCCCAAAATAAAATAGAAAGAAATA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTATGTGCACATACATGCATCCCCAAAATAAAATAGAAAGAAATA  598

seq1  AATATTTTTTAAAGCAAAAGAACAAAATTTCATACATTTCATATATATAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTTAAAGCAAAAGAACAAAATTTCATACATTTCATATATATAG  648

seq1  ATGACTATTTACTATTAATCTATTTTGTTCTTGCATGCATCTTATAAGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTATTTACTATTAATCTATTTTGTTCTTGCATGCATCTTATAAGCA  698

seq1  TTACTGTTATACAATATATGATCAGTCAAGAAATCAAAGGTAGTCATAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTATACAATATATGATCAGTCAAGAAATCAAAGGTAGTCATAAA  748

seq1  AATAAGTTTATAGCTTTTATAACAAAAGTTCACAAAATCTCAAATTTTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTTTATAGCTTTTATAACAAAAGTTCACAAAATCTCAAATTTTCT  798

seq1  GCCCTTCTGAAGTCCTGCATTAGCAGGTTTTTTAAAAAATGAATCTGGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCTGAAGTCCTGCATTAGCAGGTTTTTTAAAAAATGAATCTGGCC  848

seq1  TATGAAGGGAAAAACATTTTTGGAGCTGGAAAATGTTTGAATTGGGGCAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGGGAAAAACATTTTTGGAGCTGGAAAATGTTTGAATTGGGGCAG  898

seq1  TATTAGAAAAGAAACCAATTTATTGAATGGCACAGCTGTTCACTGTATGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGAAAAGAAACCAATTTATTGAATGGCACAGCTGTTCACTGTATGA  948

seq1  TCATTATGATCCTTGTTATTTGGGTGCTGGTTGGTATTTATATCTAATTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATGATCCTTGTTATTTGGGTGCTGGTTGGTATTTATATCTAATTA  998

seq1  GCTCTCTTACACACCATCAAGCAATCTGCATTTAGGGAATAGAGCAAAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTTACACACCATCAAGCAATCTGCATTTAGGGAATAGAGCAAAAC  1048

seq1  TAAAATATATAGAGTTTCAAGCTGCCAAAAACATATAACAGAATGAATTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATATAGAGTTTCAAGCTGCCAAAAACATATAACAGAATGAATTC  1098


seq1: chrX_127479338_127480483
seq2: B6Ng01-334D13.g_65_1193

seq1  GAATTCATCCTGGGGATACTAAGAAGGTGGGAGAAATTGGAGGAGGGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCTGGGGATACTAAGAAGGTGGGAGAAATTGGAGGAGGGTAA  50

seq1  TGAGTGATACTTGAATTGTTGTAATTGCAGTATTCAAGTTAACATGGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGATACTTGAATTGTTGTAATTGCAGTATTCAAGTTAACATGGGAT  100

seq1  ATTTTATCTCTTCTGAATCATCTCCAGTCTTGTCAACAACAAATTAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATCTCTTCTGAATCATCTCCAGTCTTGTCAACAACAAATTAGAAA  150

seq1  TTTAGAATATTTTATCTAATATTCATTGACATGTTTGCTTTTATTATAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAATATTTTATCTAATATTCATTGACATGTTTGCTTTTATTATAAG  200

seq1  CAATGAGATGATGAAGCTAAAAGAAACTTAGGGTAGGTACTAACAACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGATGATGAAGCTAAAAGAAACTTAGGGTAGGTACTAACAACAAA  250

seq1  AGATCAACAAACCATTAACTAGTATGCCACAACTAGTCATATCATCAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAACAAACCATTAACTAGTATGCCACAACTAGTCATATCATCAGCT  300

seq1  AAGTCACATTTTTTGACGCTCCATTTTCTCATCTATTAAAATAAAGGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACATTTTTTGACGCTCCATTTTCTCATCTATTAAAATAAAGGAGT  350

seq1  TTGACATGCCTAAGCTGTATTCTCTTTCCTTTTTGGTTGAGTATTTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATGCCTAAGCTGTATTCTCTTTCCTTTTTGGTTGAGTATTTGCCT  400

seq1  GAATCTTCCTCGTTTGCATATGGAATGTGGTAAAGTTGCTTAAAATAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTCCTCGTTTGCATATGGAATGTGGTAAAGTTGCTTAAAATAGTC  450

seq1  ATATTATTGAAATAGTGTGTACATTAATTTCTTTCCTACTGTGTGGTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATTGAAATAGTGTGTACATTAATTTCTTTCCTACTGTGTGGTAGA  500

seq1  GACCCAATCACATTCTGCATACAACTAGAAAGACTTATTTAGTGGAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAATCACATTCTGCATACAACTAGAAAGACTTATTTAGTGGAAACC  550

seq1  TGTAACAATTCTTTGTGAAGCAAATAAACCTTTGTAATGCAAATGCTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACAATTCTTTGTGAAGCAAATAAACCTTTGTAATGCAAATGCTTGT  600

seq1  ATTTAATGTTTCTATTTTGCAATTTTCCATTTTGATATATCAAGTATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGTTTCTATTTTGCAATTTTCCATTTTGATATATCAAGTATGCT  650

seq1  TACTCCCAAGTATAACTAAACATTACATGAAAATGAAAATTCATACCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCCAAGTATAACTAAACATTACATGAAAATGAAAATTCATACCCAA  700

seq1  TATATTTTTTCTTCTTTTTAGCTTGGTAGAAAAATTACTTTCCTTTCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTTTCTTCTTTTTAGCTTGGTAGAAAAATTACTTTCCTTTCCTG  750

seq1  CACTTAACTATGCTAGTCAGACATTGTGAATAACTATCTGTGGTCAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAACTATGCTAGTCAGACATTGTGAATAACTATCTGTGGTCAAACA  800

seq1  AATGGTTAAGGTTTTAGTCTAGTTCTATGACTTTACTGGGTGGATATCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTAAGGTTTTAGTCTAGTTCTATGACTTTACTGGGTGGATATCTT  850

seq1  ATGCCAGAATTTGTTGTTCTGGGCATCAGTTACGTCATCTGTACAGATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGAATTTGTTGTTCTGGGCATCAGTTACGTCATCTGTACAGATAG  900

seq1  AACAGTAATAGTTGCTATCTTGTAGTATTTGTATAAGAATTAAATACTAT  950
      |||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  AACAGTAATAGTTGCTATCTTGTAGTATTTGTATA--GATTAAATACTAT  948

seq1  AAAAGAGACATCTTGCTTCACCTAATGTTTCACCCATAGTGTGCTTATTA  1000
      ||||||||||||||||||||||| |||||||||||||||||||| |||  
seq2  AAAAGAGACATCTTGCTTCACCT-ATGTTTCACCCATAGTGTGC-TAT--  994

seq1  ATTCCACTGTATCATTGCTATTCTCAAACAAAATTTTCAATGTGTGTATT  1050
      |||||||||||||| ||||| |||||||||||  |||| ||||||||| |
seq2  ATTCCACTGTATCA-TGCTA-TCTCAAACAAA--TTTC-ATGTGTGTA-T  1038

seq1  CTATTTATATGCTTACATAGTACTATTTTTCATGGATTGTGCTAGACACC  1100
      ||| | |||||| |||||||||||||||||||| ||||| ||||||| ||
seq2  CTA-TAATATGC-TACATAGTACTATTTTTCAT-GATTGGGCTAGAC-CC  1084

seq1  ATCGTGATGCATAAATAATGCATCTTTGTGTAGAATCTTCCATACA  1146
      ||||||||||||||||||||||||||||||| |||||||| |||||
seq2  ATCGTGATGCATAAATAATGCATCTTTGTGT-GAATCTTCAATACA  1129


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