BAC Information

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BAC

Clone NameB6Ng01-334L19
ChromosomeX (Build37)
Map Location 127,964,576 - 127,965,695
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665773, LOC665799, LOC670449
Downstream geneLOC245600, EG631264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334L19.bB6Ng01-334L19.g
ACCGA120168GA120169
length1,1961,112
definitionB6Ng01-334L19.b B6Ng01-334L19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatagactggaccagaaaataaattcctcctgacacaaaata
atcaaaacaacaaatgcactaaataaaaatagaatattaaaagcagtaag
gggaaaaggtcaagtaacatataaaggcaggcctactagaattacaccag
acttttcaccagagactatgaaagccagaagatcctggacagatgttata
cagacattaagagaacacaaatgccaacccaggctactatacccagcaaa
actctcaattgccatagatggaaaaaacaaagtattccatgctaaaccaa
attcacacaatatctttccatgaatccagcccttaaaaacataataaagg
gaaaacaccaacacaaggacagaaactacaccctagaaaaagcaagaaag
taacccttcaacaaacttcaaaaaagagagccacaagaacagaatctgaa
ctttaataacaaaaataacaggaagcaataataacttttctttaatttct
ctgaacgtcaatggaatcaattgcccaataaaaagacatagactaataga
ctggctacacaaacaagacctaacattttgttgcttacaggaaatccacc
tagggaaaaggacagatactacctcaaagtgaaaggctggaaaacaattt
tgtaagcaaatgatccgaagaaacaagctggagtagccattctaatatca
aataaaattgacttccagactgaagttatcaaaaaagacaaggaggggca
cttcatactcatcaaaggtaaaatctaccaagatgaactctcaattctca
atatctatgctccaaatgcaagggcagccacattcattaaagaaacttta
gtaagctgaacgcacacattgtacctgcaaaacacaaataatctaattta
aaaaatttttaaaatgcagtgcacagaaaaacagaatcatggaaatgcaa
atcaaaacaaccctgagactccaccttacaccaatcagatggcactggtc
tcaatatggaaatagtctacatgagatcagctatacactactgggtaata
cacaagatgctcacatatacagaatagatgtgccactattattcacagta
ctttttttttaattaataggcagaggctagatgacaaattccttcattgg
agattgatcagacatgtgtgatacatttttaccgatagagaataac

gaattccaaataagattcaattaacaaaaattcaatttgcacacaactct
tcaagaacacatctgtttcctaaaatcagctacacctgtggatcatttgc
aaaacctctggaggccgaaaaggattcttcataaaagctatgatgctgga
attcaaatcactctagtctctatacacagttgtgtgtgtgtgtataggaa
aactacacacacatgtctgtgcatggaggtcagaagttgacataggtccc
cttgtaatattcaccacattttattttatttttagacagggtttttcaat
atcacacacctattagttagtgaaagctatcaggccagaattctcctgtc
tctgcttcccaaacattgggattttgtactaccatgcctcatgttttatg
tcattgctgagaatctgagctcaggttctccagcttggacctcaagcact
ctactgactctggtgtttctactgcccctttactccacagttttggaata
aaccttttgttggtcaaaataatctatactttctaagaattctctttcca
gaagaattaacaacagcctacaatggttagattatatctggagtatgaaa
gaatgtattcaaccaaagagtccccttagaatcactatgaaaatggaaag
aaataataacaagcctctgatttctggtgtggcatgtaaggttcctagaa
gtcaacatgccatcctaataaggcaaaagctgtgatgactcataaatcaa
taactctttttagctcatcaatgtttaggtcattggacaacttctgtccc
ctaatttggagagggagagaaacagaagaagggaattgtgtacatcatag
aagtaaccagtgcccaggtaggaaaaatggaaatcaaactggtcaaatac
tgggaagcttaatgttgacaagtttaattggtaacaaattttcagaggac
ctggtcatatatatttaatcaatgacagaaagctgactgggaagtcagaa
aaaaatgtaagcagcatactgtaaagaacatataagttctcagagacata
taaaatatgtcactaggtgatggaggaatgctagtgatgagagcaattgg
cctattttgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_127964576_127965695
seq2: B6Ng01-334L19.g_64_1175

seq1  GAATTCCAAATAAGATTCAATTAACAAAAATTCAATTTGCACACAACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATAAGATTCAATTAACAAAAATTCAATTTGCACACAACTCT  50

seq1  TCAAGAACACATCTGTTTCCTAAAATCAGCTACACCTGTGGATCATTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAACACATCTGTTTCCTAAAATCAGCTACACCTGTGGATCATTTGC  100

seq1  AAAACCTCTGGAGGCCGAAAAGGATTCTTCATAAAAGCTATGATGCTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTCTGGAGGCCGAAAAGGATTCTTCATAAAAGCTATGATGCTGGA  150

seq1  ATTCAAATCACTCTAGTCTCTATACACAGTTGTGTGTGTGTGTATAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATCACTCTAGTCTCTATACACAGTTGTGTGTGTGTGTATAGGAA  200

seq1  AACTACACACACATGTCTGTGCATGGAGGTCAGAAGTTGACATAGGTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACACACACATGTCTGTGCATGGAGGTCAGAAGTTGACATAGGTCCC  250

seq1  CTTGTAATATTCACCACATTTTATTTTATTTTTAGACAGGGTTTTTCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAATATTCACCACATTTTATTTTATTTTTAGACAGGGTTTTTCAAT  300

seq1  ATCACACACCTATTAGTTAGTGAAAGCTATCAGGCCAGAATTCTCCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACACCTATTAGTTAGTGAAAGCTATCAGGCCAGAATTCTCCTGTC  350

seq1  TCTGCTTCCCAAACATTGGGATTTTGTACTACCATGCCTCATGTTTTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCCCAAACATTGGGATTTTGTACTACCATGCCTCATGTTTTATG  400

seq1  TCATTGCTGAGAATCTGAGCTCAGGTTCTCCAGCTTGGACCTCAAGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCTGAGAATCTGAGCTCAGGTTCTCCAGCTTGGACCTCAAGCACT  450

seq1  CTACTGACTCTGGTGTTTCTACTGCCCCTTTACTCCACAGTTTTGGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGACTCTGGTGTTTCTACTGCCCCTTTACTCCACAGTTTTGGAATA  500

seq1  AACCTTTTGTTGGTCAAAATAATCTATACTTTCTAAGAATTCTCTTTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTTGTTGGTCAAAATAATCTATACTTTCTAAGAATTCTCTTTCCA  550

seq1  GAAGAATTAACAACAGCCTACAATGGTTAGATTATATCTGGAGTATGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTAACAACAGCCTACAATGGTTAGATTATATCTGGAGTATGAAA  600

seq1  GAATGTATTCAACCAAAGAGTCCCCTTAGAATCACTATGAAAATGGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTATTCAACCAAAGAGTCCCCTTAGAATCACTATGAAAATGGAAAG  650

seq1  AAATAATAACAAGCCTCTGATTTCTGGTGTGGCATGTAAGGTTCCTAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAACAAGCCTCTGATTTCTGGTGTGGCATGTAAGGTTCCTAGAA  700

seq1  GTCAACATGCCATCCTAATAAGGCAAAAGCTGTGATGACTCATAAATCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACATGCCATCCTAATAAGGCAAAAGCTGTGATGACTCATAAATCAA  750

seq1  TAACTCTTTTTAGCTCATCAATGTTTAGGTCATTGGACAACTTCTGTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTTTTTAGCTCATCAATGTTTAGGTCATTGGACAACTTCTGTCCC  800

seq1  CTAATTTGGAGAGGGAGAGAAACAGAAGAAGGGAATTGTGTACATCATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTGGAGAGGGAGAGAAACAGAAGAAGGGAATTGTGTACATCATAG  850

seq1  AAGTAACCAGTGCCCAGGTAGGAAAAATGGAAATCAAACTGGTCAAATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACCAGTGCCCAGGTAGGAAAAATGGAAATCAAACTGGTCAAATAC  900

seq1  TGGGAAGCTTAATGTTGACAAGTTTAATTGGTAACAAATTTTCAGAAGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGGAAGCTTAATGTTGACAAGTTTAATTGGTAACAAATTTTCAG-AGGA  949

seq1  CCTGGTCATATAATATTTAATCAATGACAGAAAGCTGACTGGGAAGTTCA  1000
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  CCTGGTCATAT-ATATTTAATCAATGACAGAAAGCTGACTGGGAAG-TCA  997

seq1  GAAAAAAATGTAAGCAGCATACTTGTAAAGAACATATAAAGTTCTCAAGA  1050
      |||||||||||||||||||||| |||||||||||||| |||||||| |||
seq2  GAAAAAAATGTAAGCAGCATAC-TGTAAAGAACATAT-AAGTTCTC-AGA  1044

seq1  GACATATAAAATATGTCACTAGGTGATGGAGAGATGGCTTAGTGATTGAG  1100
      |||||||||||||||||||||||||||||||  |||   |||||| ||||
seq2  GACATATAAAATATGTCACTAGGTGATGGAGGAATG--CTAGTGA-TGAG  1091

seq1  AGC-AGTGGCTATTTTTGCAG  1120
      ||| | ||||   ||||||||
seq2  AGCAATTGGCCTATTTTGCAG  1112


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