BAC Information

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BAC

Clone NameB6Ng01-334N14
ChromosomeX (Build37)
Map Location 15,723,088 - 15,925,414
singlet/doubletdoublet
Overlap geneLOC100043949
Upstream genenone
Downstream geneLOC100043950, Cypt6, LOC100038939, LOC668993, Maoa, Maob, Ndph, LOC100043063, Efhc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334N14.bB6Ng01-334N14.g
ACCGA120253GA120254
length3921,110
definitionB6Ng01-334N14.b B6Ng01-334N14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,925,017 - 15,925,414)(15,723,088 - 15,724,210)
sequence
attaaattcttaggcaaatggatgtattttattttattttattactttaa
atgaatgaaacagaatgaaaaattaaggtaactgtcatttatacttgcca
caagaaggaaaaccagttttctccaatagagtgacactgattaatcaatg
attctaggtcacacctcatgatatattgtccaaatataattgactccaca
gttgctttgtttttgtctgcctgtttgggtggtggttgtttggttatagt
tattttgtcctttatttgactttttttttcattcaggtttggttttattt
ttcttggttttttgtatttttttcttgtattggatttttgtttttagaga
aagaactaaaagctagataggtagggagggatagaggatctg
gaattctctgttcagtttctgtagcccccccccctttttttttttttttt
ttttttttttgctttttgagttctttatatattttggatattagccctct
aatcagatgtgggattggtgaagatatttttttctaatatataggttgca
aatttattctattgactatgtcctttaccttacagaagagtttctgtttt
atggggtcccatttatcaattcttgaaacaattagaggacagaccaggga
aataatgactggactgttaataaaagattaaatgatgatgataatgatgg
aatcttctcttcttctttccatggattgttcaattatctttaatagtttt
tctaggattgcacagggatgacactgtccattgttggctgagccctccta
tatcaaataacaatcaattaaatgtcatatagtcatgtatactggcaatc
tgatagacgactttcctcagctgaggttctgcattcccacgtaaatctag
tttacatcgagctgataatactatctagtacaatattaattaaaggaaca
atttatcaaagctttctgcggcagcagatgggagtgggtacagagaccca
cagccagacattatgtgatttagggaaagccaccccagagacacagacag
ctatgggctcagtgaataggtctgagctggcacagaactctcagaggaag
actaatgatagagcctaccaccctgaatatgagtgcaacagaagaaaatg
tcacatcaaacctaccatgatatagtactcttcaaaaaaattcctaaaat
cgaataaaaatgaaaataaaacatatcaaatttatgggacagaattattt
cagtcttaagagcttagagagattattgcttgcataaaaattatcataga
aaacttaaataggaagcttgatgatacgcattaggccttggaaaaacaga
tacatgaaaccccaaacagagatggacaaattggaagaaattattaatat
cgaccagaaataatgaaatgaaaccaaaagagagtgagtgatattttgtc
tcctttgaaaagataagaagattgacaaacttagtccaatggtccctaag
tcccttaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_15925017_15925414
seq2: B6Ng01-334N14.b_48_445 (reverse)

seq1  CAGATCCTCTATCCCTCCCTACCTATCTAGCTTTTAGTTCTTTCTCTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCTCTATCCCTCCCTACCTATCTAGCTTTTAGTTCTTTCTCTAAA  50

seq1  AACAAAAATCCAATACAAGAAAAAAATACAAAAAACCAAGAAAAATAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAATCCAATACAAGAAAAAAATACAAAAAACCAAGAAAAATAAAA  100

seq1  CCAAACCTGAATGAAAAAAAAAGTCAAATAAAGGACAAAATAACTATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCTGAATGAAAAAAAAAGTCAAATAAAGGACAAAATAACTATAAC  150

seq1  CAAACAACCACCACCCAAACAGGCAGACAAAAACAAAGCAACTGTGGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAACCACCACCCAAACAGGCAGACAAAAACAAAGCAACTGTGGAGT  200

seq1  CAATTATATTTGGACAATATATCATGAGGTGTGACCTAGAATCATTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATATTTGGACAATATATCATGAGGTGTGACCTAGAATCATTGATT  250

seq1  AATCAGTGTCACTCTATTGGAGAAAACTGGTTTTCCTTCTTGTGGCAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTGTCACTCTATTGGAGAAAACTGGTTTTCCTTCTTGTGGCAAGT  300

seq1  ATAAATGACAGTTACCTTAATTTTTCATTCTGTTTCATTCATTTAAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGACAGTTACCTTAATTTTTCATTCTGTTTCATTCATTTAAAGTA  350

seq1  ATAAAATAAAATAAAATACATCCATTTGCCTAAGAATTTAATGAATTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAAATAAAATACATCCATTTGCCTAAGAATTTAATGAATTC  398

seq1: chrX_15723088_15724210
seq2: B6Ng01-334N14.g_65_1174

seq1  GAATTCTCTGTTCAGTTTCTGTAGCCCCCCCCCCTTTTTTTTTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTCAGTTTCTGTAGCCCCCCCCCCTTTTTTTTTTTTTTTT  50

seq1  TTTTTTTTTTGCTTTTTGAGTTCTTTATATATTTTGGATATTAGCCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTGCTTTTTGAGTTCTTTATATATTTTGGATATTAGCCCTCT  100

seq1  AATCAGATGTGGGATTGGTGAAGATATTTTTTTCTAATATATAGGTTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGATGTGGGATTGGTGAAGATATTTTTTTCTAATATATAGGTTGCA  150

seq1  AATTTATTCTATTGACTATGTCCTTTACCTTACAGAAGAGTTTCTGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTCTATTGACTATGTCCTTTACCTTACAGAAGAGTTTCTGTTTT  200

seq1  ATGGGGTCCCATTTATCAATTCTTGAAACAATTAGAGGACAGACCAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTCCCATTTATCAATTCTTGAAACAATTAGAGGACAGACCAGGGA  250

seq1  AATAATGACTGGACTGTTAATAAAAGATTAAATGATGATGATAATGATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGACTGGACTGTTAATAAAAGATTAAATGATGATGATAATGATGG  300

seq1  AATCTTCTCTTCTTCTTTCCATGGATTGTTCAATTATCTTTAATAGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCTCTTCTTCTTTCCATGGATTGTTCAATTATCTTTAATAGTTTT  350

seq1  TCTAGGATTGCACAGGGATGACACTGTCCATTGTTGGCTGAGCCCTCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGATTGCACAGGGATGACACTGTCCATTGTTGGCTGAGCCCTCCTA  400

seq1  TATCAAATAACAATCAATTAAATGTCATATAGTCATGTATACTGGCAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATAACAATCAATTAAATGTCATATAGTCATGTATACTGGCAATC  450

seq1  TGATAGACGACTTTCCTCAGCTGAGGTTCTGCATTCCCACGTAAATCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGACGACTTTCCTCAGCTGAGGTTCTGCATTCCCACGTAAATCTAG  500

seq1  TTTACATCGAGCTGATAATACTATCTAGTACAATATTAATTAAAGGAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATCGAGCTGATAATACTATCTAGTACAATATTAATTAAAGGAACA  550

seq1  ATTTATCAAAGCTTTCTGCGGCAGCAGATGGGAGTGGGTACAGAGACCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCAAAGCTTTCTGCGGCAGCAGATGGGAGTGGGTACAGAGACCCA  600

seq1  CAGCCAGACATTATGTGATTTAGGGAAAGCCACCCCAGAGACACAGACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGACATTATGTGATTTAGGGAAAGCCACCCCAGAGACACAGACAG  650

seq1  CTATGGGCTCAGTGAATAGGTCTGAGCTGGCACAGAACTCTCAGAGGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGGCTCAGTGAATAGGTCTGAGCTGGCACAGAACTCTCAGAGGAAG  700

seq1  ACTAAGGATAGAGCCTACCACCCTGAATATGAGTGCAACAGAAGAAAATG  750
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGATAGAGCCTACCACCCTGAATATGAGTGCAACAGAAGAAAATG  750

seq1  TCACATCAAACCTACCATGATATAGTACTCTTCAAAAAAATTCCTAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCAAACCTACCATGATATAGTACTCTTCAAAAAAATTCCTAAAAT  800

seq1  CGAATAAAAATGAAAATAAAACATATCAAAATTTATGGGACAGAATTATT  850
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CGAATAAAAATGAAAATAAAACATATC-AAATTTATGGGACAGAATTATT  849

seq1  TCAGTCTTAAGAGCTTAGAGAGATAATTGCTTGCATAAAAATTATCATAG  900
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCAGTCTTAAGAGCTTAGAGAGATTATTGCTTGCATAAAAATTATCATAG  899

seq1  AAAACTTAAATAGGAAGCTTGATGATACGCATTAAGGCCTTGGAAAAACA  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  AAAACTTAAATAGGAAGCTTGATGATACGCATT-AGGCCTTGGAAAAAC-  947

seq1  AGATAACATGAAACCCCAAAACAGAAGATGGACAAATGGGAAGAAATAAT  1000
      |||| |||||||||||| |||||| |||||||||||| ||||||||| ||
seq2  AGAT-ACATGAAACCCC-AAACAG-AGATGGACAAATTGGAAGAAATTAT  994

seq1  AAATATCAGACCAGAAAATAATGAAATAGAAACAAAAAGAAGAGTGAAGT  1050
       |||||| |||||| |||||||||||| ||||| ||||| |||||| |||
seq2  TAATATC-GACCAG-AAATAATGAAAT-GAAACCAAAAG-AGAGTG-AGT  1039

seq1  GAATAATTTGTCTC--TTGAAAAGATAAGGAAGATTGACAAAAACTTAGC  1098
      | ||| ||||||||  |||||||||||| ||||||||||  |||||||| 
seq2  G-ATATTTTGTCTCCTTTGAAAAGATAA-GAAGATTGAC--AAACTTAGT  1085

seq1  CAAATTGTCCCTAAGTCCCCTAAGC  1123
      | ||| ||||||||||||| |||||
seq2  CCAATGGTCCCTAAGTCCCTTAAGC  1110