BAC Information

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BAC

Clone NameB6Ng01-338F08
ChromosomeX (Build37)
Map Location 141,527,573 - 141,528,423
singlet/doubletsinglet
Overlap geneZcchc16
Upstream geneLOC666628, LOC666633, LOC100039378, LOC100039243, Alg13, LOC100039407, Trpc5, LOC100039436, LOC666655
Downstream geneLOC623591, Lhfpl1, Amot, EG434860, LOC100039313, LOC623697, LOC623731
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338F08.bB6Ng01-338F08.g
ACCGA122671GA122672
length1,052857
definitionB6Ng01-338F08.b B6Ng01-338F08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatagctgagtagtactccattgtgtaaatgtatc
acattttctgtatccattcctctgttgagggacatctgagttctttccag
cttctggctattataaattaggctgctatgaatatagtggagcatgtgtc
cttattaccagttaaaacatcttctgagtataggtccaggagaggtattg
ctgaatcttctggtagggagaacgaagattttcaacttaaacggccagga
aatatcttcaacaaaattagagaagaacctaacctaaagaaaaggatgcc
caagaacatacaagaagcctacagaactccaaataggctagaccagaaaa
gaaattcctcctgactcataataatcaaaacaacaaatgcactaaataga
gatagaatattaaaagcagtaagggaaaaaggtcaagtaacataaaaagg
cagacctattagaattacaccagacttcttaccagagattatgaaagcca
gaagatactggacagatgtatacagatcctaagagaacacaaatgtcagc
ccaggctactatacccagaaaactcttaattaccatacatggagaaaaca
aagtattcaatgacaaaaccaaattcacacaatttctttccaggaatcca
tccctttaaaggataataaagggaaaactccaacacaaggagggaaatta
tgccctagaaaaagcaagaaagttatccttcaacaaacctagaagaagag
atagctgcaagaatagcatccaaactctaacaacaaaaataacaagatgc
aacaactactttcccttaatatctcttaatatcaatggactcaattccca
aataaaaagacagactaacagactggttacataaacaggacccaacattt
tgctgcatacaggaaacttacctcgggaatatagacagatactacctcag
agtaaaagctggaaatcattttctaagcaaatggtctgaagaaacaagct
ggagtagccattctaatatcaaggagtcggtgggggggagggaaggagga
ag
gaattcttgatctggcctcagtgagagagactttagaccccagggagtgt
ggaggcctggcaggagagtgggctaggagtggggttggaagatcctcttg
gatacagaggagagtaggaatgggctgaggaactgtgggagggtagacca
ggaaggtggtaatgattggattgtaaaaaaggtaaaagtaaaaaaaaaaa
aatgaagaagaagaagaagaagtctttaacctatttgcagtcacccgtcc
tcttctggaaccctatgcaacaacaacaaaaataaagatcattgtcattt
gtaaaaaaactaatgtaatataggaaaactgctagtatgcaaagtcttca
atgtttctatacatggtttggacattatttaaggtgatatcgattacctt
ggtctggtttttatatgttatatagacacattcatatagcatgttctata
ccactacatatgtggcatttgtcataaggaataagtgaaagcaaagtgtc
tttctctttctaatctaattgctcatgtgtgtgtgtgtgtgtgggtttat
acatatatatatatcaaactgtttatgtcagaaatgaaaatatttgaaaa
atatactgcatctataatgaagaatatctttgtttagtttaatacattac
caaagtttggtgaaggagtctgtgagcttgactatatgacaatagaaaac
tctcaagttataaagccaaagacaacagggactcaatagatttccttttg
ttccagtagatggcctcatacatatgccaactaattatacttactgggtt
atcaaaaccaataataaaatgagcgatatgaaattgggaggaagtcttgt
tagatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_141527573_141528423
seq2: B6Ng01-338F08.g_69_925 (reverse)

seq1  CCCTCTAACATGACTTCCTCCCAATTTCATATC-CTCATTTTATTATTGG  49
      || ||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  CCATCTAACAAGACTTCCTCCCAATTTCATATCGCTCATTTTATTATTGG  50

seq1  TTTTGATAACCCAGTAAGTATAATTAGTTGGCATATGTATGAGGCCATCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATAACCCAGTAAGTATAATTAGTTGGCATATGTATGAGGCCATCT  100

seq1  ACTGGAAC-AAAGGAAATCTATTGAGTCCCTGTTGTC-TTGGCTTTATAA  147
      |||||||| |||||||||||||||||||||||||||| ||||||||||||
seq2  ACTGGAACAAAAGGAAATCTATTGAGTCCCTGTTGTCTTTGGCTTTATAA  150

seq1  CTTGAGAGTTTTCTATTGTCATATAGTCAAGCTCACAGACTCCTTCACC-  196
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTGAGAGTTTTCTATTGTCATATAGTCAAGCTCACAGACTCCTTCACCA  200

seq1  AACTTTGGTAATGTATTAAACT-AACAAAGATATTCTTCATTATAGATGC  245
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AACTTTGGTAATGTATTAAACTAAACAAAGATATTCTTCATTATAGATGC  250

seq1  AGTATATTTTTCAAATA-TTTCATTTCTGACATAAACAGTTTGATATATA  294
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGTATATTTTTCAAATATTTTCATTTCTGACATAAACAGTTTGATATATA  300

seq1  TATATGTATAAACCCACACACACACACACACATGAGCAATTAGATTAGAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTATAAACCCACACACACACACACACATGAGCAATTAGATTAGAA  350

seq1  AGAGAAAGACACTTTGCTTTCACTTATTCCTTATGACAAATGCCACATAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGACACTTTGCTTTCACTTATTCCTTATGACAAATGCCACATAT  400

seq1  GTAGTGGTATAGAACATGCTATATGAATGTGTCTATATAACATATAAAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGGTATAGAACATGCTATATGAATGTGTCTATATAACATATAAAAA  450

seq1  CCAGACCAAGGTAATCGATATCACCTTAAATAATGTCCAAACCATGTATA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACCAAGGTAATCGATATCACCTTAAATAATGTCCAAACCATGTATA  500

seq1  GAAACATTGAAGACTTTGCATACTAGCAGTTTTCCTATATTACATTAGTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATTGAAGACTTTGCATACTAGCAGTTTTCCTATATTACATTAGTT  550

seq1  TTTTTACAAATGACAATGATCTTTATTTTTGTTGTTGTTGCATAGGGTTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACAAATGACAATGATCTTTATTTTTGTTGTTGTTGCATAGGGTTC  600

seq1  CAGAAGAGGACGGGTGACTGCAAATAGGTTAAAGACTTCTTCTTCTTCTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGGACGGGTGACTGCAAATAGGTTAAAGACTTCTTCTTCTTCTT  650

seq1  CTTCATTTTTTTTTTTTTACTTTTACCTTTTTTACAATCCAATCATTACC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTTTTTTTTTTTACTTTTACCTTTTTTACAATCCAATCATTACC  700

seq1  ACCTTCCTGGTCTACCCTCCCACAGTTCCTCAGCCCATTCCTACTCTCCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCTGGTCTACCCTCCCACAGTTCCTCAGCCCATTCCTACTCTCCT  750

seq1  CTGTATCCAAGAGGATCTTCCAACCCCACTCCTAGCCCACTCTCCTGCCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCCAAGAGGATCTTCCAACCCCACTCCTAGCCCACTCTCCTGCCA  800

seq1  GGCCTCCACACTCCCTGGGGTCTAAAGTCTCTCTCACTGAGGCCAGATCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCCACACTCCCTGGGGTCTAAAGTCTCTCTCACTGAGGCCAGATCA  850

seq1  AGAATTC  851
      |||||||
seq2  AGAATTC  857