BAC Information

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BAC

Clone NameB6Ng01-338O07
ChromosomeX (Build37)
Map Location 29,093,190 - 29,094,383
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664923, LOC100039364, LOC100039377, LOC100039386, LOC100039127, EG664944, LOC100039423, LOC100039145, LOC664951, LOC100042071, LOC664958, LOC664964, LOC100042087, LOC100039171, LOC100042103
Downstream geneLOC100042109, LOC100042115, LOC100042122, LOC100042135, LOC100042144, LOC664982, LOC100039212, EG664989, LOC664996, LOC100039467, LOC100039481
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-338O07.bB6Ng01-338O07.g
ACCGA123047GA123048
length1,203964
definitionB6Ng01-338O07.b B6Ng01-338O07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcagtacctggttgccagtggcagcttagaactggtatatacc
accttgtttgatgtcaggaagtagcaaggccatcaaaatatttaagaggg
catgaataactatgtacagaatcttcttctctgatggcaggatggatctt
tgatgtaaaaattgttgcagctgaaagcatacttctcataaataacagca
gaaaaatttggataactgatatcagtagagattctataggcagttggaga
cgcttatatttatgttgccccataagttagcagagattattgtgatcact
gctgcttgaggcctgaaatgtcatgaatataaaaatggtatcttttgtca
ttatgtgtcctcagtgtaacagaatatgaaactgaacatgacatggagga
acagtatgacctaaattttcaccttatgttcagatggtctcatagatcct
ggacattaacaatctcatcagaagcatcatggactgtgggtttaatcaag
gccactgatggcagcataatggatatcatcatattttctgtaggcacttt
gagtgagtgacattaatatagttctcagtggtagcagagatcactaatga
caaggtggccaatgacagcaagtaacaaaggccataccatggaatctatt
gccatttatatgtcaatggcattagcatagattaaaagggaagaaaaatt
atgatcataaacctcttatcaggtggcaatatttatcttgacagcgcaat
tccaggggcagtaacaaccatgtacattacatggttgatagcaggcagga
agatcaacagaatttcttatggaagatagaatctcagacatcaatctgat
ctactgtgtcacctcagaacacttacctcaatatgacctctaccattaac
atgaaccttgtaagtcagaacgttctcaaacgacaggagagatcatgggc
catcaccaggtttttcatcagcaatagaaaattaaatggactccatcatt
attgctggtcacaagcatgcagcactcacatcaggtatttttcaggtttc
agttaggattacaaggcatcaaaatagtcttccagttacagcggaacagc
accttacctcattatgaacttaggcagcatattaccatggaacttacaac
aggaattctttatggttgatttatcatagacactcaatgtagcctttcca
tga
gaattctttgtttagctctgagccccatttttaatggtgttatttgctgg
atacttcaatgcatcttagaagctgggaacaaaagagcgatggaagtagt
tacagagacaaaatgtggactggagactgaagaaattaccatccagagac
tgatttacctggggatccatctgtgatggtttgtatattcttggaccagg
gagtggcaccatttggaggtgtggccttgttggaataggtgtgacctggt
tggagtaggtgtgtcactatggttttgggcataagatcctcaccttagtt
tcctggaagtcagtcttccactagtagcctttggatgaagatgtagaact
ctcagctcctcctgcaccatgcctgcctgaatgctgccatgctcccacct
ttatggtaatgaattgaacctctgaatctataagccagccccaattaaat
gttggttttttataagacttgccttggtcatggtttatgttcacagccat
aaaaccctaactaatataccatctcgtatacaatcaccaaacccagacac
tgttgtggatgccaacaactgcttactgacaggagcctgatatagctctc
tcctgacaggctctgccagaaaactaacaaatacataagtggatcctcac
agccatgcacatagggtccccattaaagaacttagagaaaggacctaagg
agctgaagagtttgatgacccataagaggaacaacaaaatgaactagcca
gtactcccagagctcccaggcactaaaccaccaaccaaagagcacatatg
gtgggattcgtggttccagctgcatatacagaacaggatggcctagttag
acatcaatgtgcagagaggccctttgtcctatgaatgttctatgactcaa
tgtgggggaatgccagggccaggaagctggagtggctgggttgataagga
agggagggaggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_29093190_29094383
seq2: B6Ng01-338O07.b_43_1245

seq1  GAATTCCTCAGTACCTGGTTGCCAGTGGCAGCTTAGAACTGGTATATACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGTACCTGGTTGCCAGTGGCAGCTTAGAACTGGTATATACC  50

seq1  ACCTTGTTTGATGTCAGGAAGTAGCAAGGCCATCAAAATATTTAAGAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTTTGATGTCAGGAAGTAGCAAGGCCATCAAAATATTTAAGAGGG  100

seq1  CATGAATAACTATGTACAGAATCTTCTTCTCTGATGGCAGGATGGATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATAACTATGTACAGAATCTTCTTCTCTGATGGCAGGATGGATCTT  150

seq1  TGATGTAAAAATTGTTGCAGCTGAAAGCATACTTCTCATAAATAACAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTAAAAATTGTTGCAGCTGAAAGCATACTTCTCATAAATAACAGCA  200

seq1  GAAAAATTTGGATAACTGATATCAGTAGAGATTCTATAGGCAGTTGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTTGGATAACTGATATCAGTAGAGATTCTATAGGCAGTTGGAGA  250

seq1  CGCTTATATTTATGTTGCCCCATAAGTTAGCAGAGATTATTGTGATCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTATATTTATGTTGCCCCATAAGTTAGCAGAGATTATTGTGATCACT  300

seq1  GCTGCTTGAGGCCTGAAATGTCATGAATATAAAAATGGTATCTTTTGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTGAGGCCTGAAATGTCATGAATATAAAAATGGTATCTTTTGTCA  350

seq1  TTATGTGTCCTCAGTGTAACAGAATATGAAACTGAACATGACATGGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGTCCTCAGTGTAACAGAATATGAAACTGAACATGACATGGAGGA  400

seq1  ACAGTATGACCTAAATTTTCACCTTATGTTCAGATGGTCTCATAGATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATGACCTAAATTTTCACCTTATGTTCAGATGGTCTCATAGATCCT  450

seq1  GGACATTAACAATCTCATCAGAAGCATCATGGACTGTGGGTTTAATCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTAACAATCTCATCAGAAGCATCATGGACTGTGGGTTTAATCAAG  500

seq1  GCCACTGATGGCAGCATAATGGATATCATCATATTTTCTGTAGGCACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGATGGCAGCATAATGGATATCATCATATTTTCTGTAGGCACTTT  550

seq1  GAGTGAGTGACATTAATATAGTTCTCAGTGGTAGCAGAGATCACTAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGTGACATTAATATAGTTCTCAGTGGTAGCAGAGATCACTAATGA  600

seq1  CAAGGTGGCCAATGACAGCAAGTAACAAAGGCCATACCATGGAATCTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGGCCAATGACAGCAAGTAACAAAGGCCATACCATGGAATCTATT  650

seq1  GCCATTTATATGTCAATGGCATTAGCATAGATTAAAAGGGAAGAAAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTATATGTCAATGGCATTAGCATAGATTAAAAGGGAAGAAAAATT  700

seq1  ATGATCATAAACCTCTTATCAGGTGGCAATATTTATCTTGACAGCGCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCATAAACCTCTTATCAGGTGGCAATATTTATCTTGACAGCGCAAT  750

seq1  TCCAGGGGCAGTAACAACCATGTACATTACATGGTTGATAGCAGGCAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGGCAGTAACAACCATGTACATTACATGGTTGATAGCAGGCAGGA  800

seq1  AGATCAACAGAATTTCTTATGGAAGATAGAATCTCAGACATCAATCTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAACAGAATTTCTTATGGAAGATAGAATCTCAGACATCAATCTGAT  850

seq1  CTACTGTGTCACCTCAGAACACTTACCTCAATATGACCTCTACCATTAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTGTCACCTCAGAACACTTACCTCAATATGACCTCTACCATTAAC  900

seq1  ATGAACCTTGTAAGTCAGAACGTTCTCAAACGACAGGAGAGATCAT-GGC  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGAACCTTGTAAGTCAGAACGTTCTCAAACGACAGGAGAGATCATGGGC  950

seq1  CATCACCAGGTTTTTCATCAGCAATAGAAAAATAAATGGACTCCATCATT  999
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CATCACCAGGTTTTTCATCAGCAATAGAAAATTAAATGGACTCCATCATT  1000

seq1  ATTGCTGGTCAC-AGCATGCAGCACTCACATCAAGGTA-TTTTCAGGTTT  1047
      |||||||||||| ||||||||||||||||||| ||||| |||||||||||
seq2  ATTGCTGGTCACAAGCATGCAGCACTCACATC-AGGTATTTTTCAGGTTT  1049

seq1  CAGTTAGGATTAC-AGGCATCAAAATAGTC-TCCAGTAACAGC-GAACAG  1094
      ||||||||||||| |||||||||||||||| |||||| ||||| ||||||
seq2  CAGTTAGGATTACAAGGCATCAAAATAGTCTTCCAGTTACAGCGGAACAG  1099

seq1  CA-CTTACCTCATTATGAACTTAGGCAGCAATAATTACCATGGACTTTAC  1143
      || |||||||||||||||||||||||||||   |||||||||||  ||||
seq2  CACCTTACCTCATTATGAACTTAGGCAGCA--TATTACCATGGAACTTAC  1147

seq1  AACAG--ATTC-TTATGGTTGATTTATCATAGACA-TC-ATGTAGCTTTT  1188
      |||||  |||| ||||||||||||||||||||||| || ||||||| |||
seq2  AACAGGAATTCTTTATGGTTGATTTATCATAGACACTCAATGTAGCCTTT  1197

seq1  CAATGA  1194
      | ||||
seq2  CCATGA  1203