MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-341L23
Chromosome	X (Build37)
Map Location	123,302,443 - 123,306,277
singlet/doublet	doublet
Overlap gene	none
Upstream gene	EG665611, EG626048, LOC100040410, LOC100039903, LOC665679
Downstream gene	4932411N23Rik, Gm381, LOC100040472, Gm382, 4921511C20Rik, 4930412D23Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG665611 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665611 MGI:3646259
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 981 ESTs, 7 Proteins

name	EG626048 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626048 MGI:3645883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 937 ESTs, 7 Proteins

name	LOC100040410 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040410
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein

name	LOC100039903 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 86 ESTs

name	LOC665679 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665679
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	4932411N23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237029 MGI:3045322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm381 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214308 MGI:2685227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100040472 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Gm382 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211208 MGI:2685228
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921511C20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245598 MGI:2685229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	4930412D23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73934 MGI:1921184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins

name	EG665611 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272237 GeneID:665611 MGI:3646259
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 981 ESTs, 7 Proteins product : predicted gene, EG665611 transcript_id : XM_978135.2

name	EG626048 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408243 GeneID:626048 MGI:3645883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 936 ESTs, 7 Proteins product : predicted gene, EG626048, transcript variant 2 transcript_id : XM_890604.2

name	EG626048 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272238 GeneID:626048 MGI:3645883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 420 ESTs, 7 Proteins product : predicted gene, EG626048, transcript variant 1 transcript_id : XM_001473380.1

name	LOC100040410 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272248 GeneID:100040410
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : similar to RIKEN cDNA 3110007F17 gene transcript_id : XM_001474637.1

name	LOC100039903 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272240 GeneID:100039903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 86 ESTs product : hypothetical protein LOC100039903 transcript_id : XM_001473395.1

name	4932411N23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343243 GeneID:237029 MGI:3045322
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932411N23 gene transcript_id : NM_177705.2

name	Gm381 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20985343 GeneID:214308 MGI:2685227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : gene model 381, (NCBI) transcript_id : XM_142110.1

name	LOC100040472 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272250 GeneID:100040472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : similar to pol protein transcript_id : XM_001474744.1

name	Gm382 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802851 GeneID:211208 MGI:2685228
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 382, (NCBI) transcript_id : NM_001033241.2

name	4930412D23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272242 GeneID:73934 MGI:1921184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins product : RIKEN cDNA 4930412D23 gene transcript_id : XM_001473476.1

name	EG665611 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94408240 GeneID:665611 MGI:3646259
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 protein_id : XP_983229.1

name	EG626048 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272239 GeneID:626048 MGI:3645883
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 isoform 1 protein_id : XP_001473430.1

name	EG626048 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83003650 GeneID:626048 MGI:3645883
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 isoform 2 protein_id : XP_895697.1

name	LOC100040410 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272249 GeneID:100040410
definition	codon_start : 1 product : similar to RIKEN cDNA 3110007F17 gene protein_id : XP_001474687.1

name	LOC100039903 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272241 GeneID:100039903
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473445.1

name	4932411N23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244162 CCDS:CCDS30382.1 GeneID:237029 MGI:3045322
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 note : novel Myb-like DNA-binding domain containing protein product : hypothetical protein LOC237029 protein_id : NP_808373.1

name	Gm381 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20985344 GeneID:214308 MGI:2685227
definition	codon_start : 1 product : similar to novel gene coding for a KH domain containing protein protein_id : XP_142110.1

name	LOC100040472 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272251 GeneID:100040472
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001474794.1

name	Gm382 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701740 GeneID:211208 MGI:2685228
definition	GO_function : GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC211208 protein_id : NP_001028413.1

name	4930412D23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272243 GeneID:73934 MGI:1921184
definition	codon_start : 1 product : hypothetical protein LOC73934 protein_id : XP_001473526.1

name	LOC665679 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665679
definition	number : 2 pseudo : _no_value

name	LOC665679 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665679
definition	number : 1 pseudo : _no_value

name	4921511C20Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272234 GeneID:245598 MGI:2685229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921511C20 gene pseudo : _no_value transcript_id : XR_035167.1

clone name	MSMg01-195N23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-524F05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-304N06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-079F14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-098J13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-140A21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-158N04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-181N24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-357B18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-412F23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-453F03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-453O14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-518L08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-262O21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-101C05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-368J06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-386G14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-500N14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-511L11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-523O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119L13
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-341L23.b	B6Ng01-341L23.g
ACC	GA125042	GA125043
length	1,050	840
definition	B6Ng01-341L23.b	B6Ng01-341L23.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(123,303,836 - 123,306,277)	(123,302,443 - 123,304,655)
sequence	gaattcttccattttaacacatttttgtattaatttggtcaactttctca taataaattcaattcaatcttgtatgtttatattaaaatattgatctctt ctttgcaaacttgtgaacatgagttttccctgttttccatttgaccagtt tttttttcaataaaattcctccattttcccatgtttatgctaattttttt ctttttatctaaatgctgtttaagaacatctcaaattttatcaaaaaatg attctctccattttctctaataggcaaaatatgttttctttgctttcctt tctaactgaaggttttttccatcgaattcttccattataaaacatttttc tataagttttgtcaattttctcaaaaatacatttgaataacatcttgtaa ttttttaaaattagatattttcctcaattacgtttccaattctatcccaa aagtcccccataccctccctcgcactcccctatcttacaatgatcacatc agctgtctctcatagtgaacatgagttttctccattttcgatttgaccaa tcgtttttcaatcaatttcctccattttaaccacatttttctgtacagtt ttcacttttatcagaaatagtgtataagaacatctcgaaatttatcagaa aatgtttctctcctttttctttaatgaaaaagaatatgttttctacgttt tcctctttacccggtgatttttcaatctattatttccattttaacacatt ttttaaaatattttttttcaatttttgtcacaaatacattcgaatataat cttttattttatcgtaatatgatgatctctagttttgaaaatagtgaaca tgaaattttctaagttttccatttgaacagcctgtttttccatcaatttc atccattttaaccccatttttttcctgtagttttcttacattttttatca gaataatgtattagacatctcgatttcatccaaataatatttctctcaat tttctctaatagaaaatatgttatacgcttctttctacagtagcgttttc	gaattctttggaaaacgctactggtagaaaggaaagcgtattaaacatat ttttctaataggagaaaattgagagaaatattatttgatgaaattcgaga tgttctaatacattatttctgataaaaatgtaagaaaactacaggaaaaa atggggttaaaatggatgaaattgatggaaaaacaggctgttcaaatgga aaacttagaaaattcatgttcactattttcaaaactagagatcatcatat tacgataaaataaaagattatattcgaatgtatttgtgacaaaattgaaa aaaatattttaaaaatgtgttaaaatggaaataatagattgaaaaatcac cgggtaaagaggaaaacgtagaaaacatattctttttcattagagaaaaa ggagagaaacattttctgataaatttcgagatgttcttatacactatttc tgataaaatgaaaactgtacagaaaaatgtggttaaaatggaggaaattg attgaaaaacgattggtcaaatcgaaaatggagaaaactcatgttcacta tgagagacagctgatgtgatcattgtaagataggggagtgcgagggaggg tatgggggacttttgggatagaattggaaacgtaattgaggaaaatatct aattttaaaaaattacaagatgttattcaaatgtatttttgagaaaattg acaaaacttatagaaaaaatgttttataatggaagaattcgatgggaaaa aacccttcagttagaaaaggaaagcaaagaaaacatattttttgccctat tagaggaaaatggaagagaaatcatttttttgataaaatt
quality values	Open. Hide. 49 31 46 35 62 62 62 62 62 33 18 62 62 62 47 56 54 41 25 47 41 62 62 62 62 62 47 62 59 59 59 43 49 43 62 62 62 59 59 59 47 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 54 58 58 58 54 58 58 52 58 54 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 54 58 58 58 58 54 58 58 58 58 58 58 41 52 58 54 58 45 41 58 58 58 52 58 54 58 54 58 58 58 58 42 42 41 58 58 58 58 51 58 58 58 58 51 49 54 58 51 47 58 58 58 58 51 58 54 49 47 49 58 58 58 49 50 51 41 44 41 54 53 58 58 58 58 58 51 54 58 52 41 52 51 58 58 58 58 58 52 51 47 58 58 58 35 53 54 50 44 39 58 58 51 41 49 49 34 58 49 50 39 47 58 39 58 31 47 40 58 51 53 51 40 40 58 35 52 58 49 50 51 53 51 28 46 15 24 31 26 54 31 54 42 53 49 50 49 52 50 40 54 54 54 27 49 38 41 25 36 53 39 49 32 54 54 54 52 33 53 52 38 42 29 33 25 54 54 33 42 39 40 47 47 53 54 53 35 46 30 39 37 44 51 36 32 33 54 44 52 53 15 33 31 19 52 53 53 32 31 26 37 31 53 32 33 41 31 42 42 51 32 27 32 31 53 52 52 31 31 34 31 34 42 36 39 51 51 51 46 17 32 51 51 42 31 34 32 51 46 51 51 51 51 31 33 33 39 23 51 51 40 24 34 23 31 32 38 32 46 29 22 25 42 28 31 21 32 30 42 46 36 43 33 35 34 31 32 33 46 46 31 42 31 46 46 30 41 35 37 39 9 34 41 31 39 23 31 31 23 35 31 28 32 31 41 31 36 30 30 46 46 22 29 29 48 47 25 24 29 24 13 19 24 33 31 30 21 37 11 44 13 38 48 44 25 26 18 33 32 21 31 44 48 33 21 37 31 32 48 29 17 24 11 23 28 35 22 33 8 26 14 39 40 39 19 13 16 24 28 23 22 21 33 47 18 13 15 23 16 28 17 26 24 21 5 5 6 25 31 31 24 25 26 43 48 39 43 39 21 8 26 8 30 13 28 28 28 38 31 19 26 12 16 11 19 6 18 34 40 32 34 13 6 9 14 19 16 27 24 7 7 21 15 27 8 17 7 18 15 7 24 8 15 28 27 19 25 9 11 3 27 13 20 21 16 10 8 28 29 18 16 11 15 6 6 14 28 7 14 12 17 10 11 9 9 17 25 28 9 11 5 9 3 7 4 17 6 4 16 17 17 15 3 5 8 22 11 3 3 2 3 14 17 11 12 3 3 2 16 13 21 13 8 22 11 13 6 17 10 8 9 17 28 17 12 14	Open. Hide. 62 49 51 47 62 62 62 62 62 62 35 37 38 38 49 35 46 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 54 62 56 62 62 62 62 56 62 62 62 62 62 62 62 56 62 62 62 62 47 62 62 47 47 62 62 62 62 62 62 62 62 62 62 47 62 62 62 52 62 52 62 62 62 62 48 62 62 62 48 47 62 62 62 52 62 62 58 52 54 58 54 52 58 58 54 54 51 37 45 58 54 54 58 58 53 58 54 54 42 52 54 54 58 58 58 35 58 50 58 54 52 52 52 54 54 58 46 54 58 52 58 35 48 52 49 58 58 58 50 58 58 49 58 58 47 58 58 54 25 58 38 37 52 42 51 58 58 58 58 49 30 53 58 51 58 51 54 49 52 32 32 34 43 46 31 51 52 50 38 50 41 37 46 35 22 23 40 50 50 40 40 49 28 30 38 40 40 22 21 39 38 28 33 25 30 58 42 21 42 46 50 37 48 26 29 46 47 34 28 35 19 13 49 36 32 29 28 50 50 25 36 33 33 54 29 13 25 33 39 31 49 51 49 18 25 25 37 25 39 28 39 14 19 18 15 12 15 29 37 42 28 26 26 17 18 32 39 25 31 15 9 38 9 32 29 19 13 25 21 37 29 35 46 39 37 29 42 26 26 20 17 6 18 37 24 42 28 32 32 32 25 21 13 12 13 9 21 18 7 12 15 34 19 12 17 21 32 31 17 31 38 24 18 21 22 14 20 34 38 25 41 32 25 26 11 15 20 11 30 28 29 32 29 10 11 9 32 25 53 35 31 25 20 12 18 22 5 33 31 33 25 39 30 8 6 15 9 21 24 27 27 6 6 23 19 19 30 28 32 42 32 31 18 31 8 6 28 32 12 6 31

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_123303836_123306277
seq2: B6Ng01-341L23.b_51_1100 (reverse)

seq1  GAAAACACTACTGGTAGAAAGGAATGCGTATTAAACATATTTTTCTAATA  50
      |||||| ||||| ||||||||  | ||||||  |||||| ||||||| ||
seq2  GAAAACGCTACT-GTAGAAAG--AAGCGTAT--AACATA-TTTTCTATTA  44

seq1  GGAGAAAATTGAGAGAAACATTATTT-GATGAAATTCGAGATGTTCTAAT  99
       ||||||||||||||||| ||||||| ||||||| |||||||| ||||||
seq2  -GAGAAAATTGAGAGAAATATTATTTGGATGAAA-TCGAGATG-TCTAAT  91

seq1  ACATTATTTCTGAT-AAAAATGTAAGAAAACTACAGG-AAAAAATGTGGT  147
      |||||| ||||||| |||||||||||||||||||||| |||||||| |||
seq2  ACATTA-TTCTGATAAAAAATGTAAGAAAACTACAGGAAAAAAATGGGGT  140

seq1  TAAAATGGATGAAATTGATGGAAAAACAGGCTGTTCAAATGGAAAACTTA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGGATGAAATTGATGGAAAAACAGGCTGTTCAAATGGAAAACTTA  190

seq1  GAAAA-TTCATGTTCACTATTTTCAAAACTATAGATCATCATATTACGAT  246
      ||||| ||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAAAATTTCATGTTCACTATTTTCAAAACTAGAGATCATCATATTACGAT  240

seq1  AAAATAAAAGATTATATTCGAATGTATTTGTGAC-AAAATTGAAAAAAAA  295
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAAATAAAAGATTATATTCGAATGTATTTGTGACAAAAATTGAAAAAAAA  290

seq1  TATTTT-AAAAACGTGTTAAAATGGAAATAATAGATTGAAAAATCACCGG  344
      |||||| ||||| |||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAAAAATGTGTTAAAATGGAAATAATAGATTGAAAAATCACCGG  340

seq1  GTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTAGAGAAAAAGGA  394
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTAAAGAAAAAGGA  390

seq1  GAGAAACATTTTCTGATAAATTTTGAGATGTTCTTATACACTATTTCTGA  444
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAGAAACATTTTCTGATAAATTTCGAGATGTTCTTATACACTATTTCTGA  440

seq1  TAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGAT  490

seq1  TGAAAAACGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATG  540

seq1  AGAGACAGCTGAGGTCATCATTGTAAGATAGGGGAGTGCGAGGGAGGGTA  594
      |||||||||||| || ||||||||||||||||||||||||||||||||||
seq2  AGAGACAGCTGATGTGATCATTGTAAGATAGGGGAGTGCGAGGGAGGGTA  590

seq1  TGGGGGACTTTTGGGATAGAATTGGAAACGTAATTGAGGAAAATACCTAA  644
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGGGGACTTTTGGGATAGAATTGGAAACGTAATTGAGGAAAATATCTAA  640

seq1  TTTAAAAAAAATACAAGATGTTATTCAAATATATTTTTGAGAAAATTGAC  694
      ||| |||||| ||||||||||||||||||| |||||||||||||||||||
seq2  TTTTAAAAAATTACAAGATGTTATTCAAATGTATTTTTGAGAAAATTGAC  690

seq1  AAAATTTATAGAAAAATGTTTTATAATGGAAGAATTCGATGG-AAAAACC  743
      |||| ||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAAACTTATAGAAAAATGTTTTATAATGGAAGAATTCGATGGAAAAAACC  740

seq1  TTCAGTTAGAAAGGAAAACAAAGAAAACATATTTTTCCTAATAGAGAAAA  793
      ||||||||||||||||| ||||||||||||||||| |||| |||||||||
seq2  TTCAGTTAGAAAGGAAAGCAAAGAAAACATATTTTGCCTATTAGAGAAAA  790

seq1  TGGAGAGAATCATTTTCTGATAAAATTCGAAATGTTCTTAAACAGCATTT  843
      |||||||||||||||| |||||||||| || |||||||||||||||||||
seq2  TGGAGAGAATCATTTTTTGATAAAATTTGAGATGTTCTTAAACAGCATTT  840

seq1  GGATAAAAAGTAAAAAATTACAATAAACGTGGAAAAATGGAGGAATTTGA  893
       ||||||||| |||||||||  |||||| ||| ||||||||||||||| |
seq2  AGATAAAAAGAAAAAAATTAGCATAAACATGGGAAAATGGAGGAATTTTA  890

seq1  TAGAAAAAAAAACCTGGTCAAATGGAAAACAGGGAAAACTCATGTTCACA  943
      | |||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAAAAA-CTGGTCAAATGGAAAACAGGGAAAACTCATGTTCACA  939

seq1  AGTTTTGCAAAGAAGAGATCAATATTTTAATATAAACATACATGATTGAA  993
      || ||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AG-TTTGCAAAGAAGAGATCAATATTTTAATATAAACATACAAGATTGAA  988

seq1  TTGAATTTATTATGAGAAAGTTGACCAAATTAATACAAAAATGTGTTAAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTATTATGAGAAAGTTGACCAAATTAATACAAAAATGTGTTAAA  1038

seq1  ATGGAAGAATTCAATGAAAAAAAAAAAACTCCTGGTAGAAAGGCAAACAT  1093
      ||||||||||||                                      
seq2  ATGGAAGAATTC--------------------------------------  1050

seq1  AGAAAACCTGTTTTTCCTATTAGAAAAATTGGATAGAAACATTTTCTCAT  1143
                                                        
seq2  --------------------------------------------------  1050

seq1  AAAATTCGAGATGTTCTTATACAGCATATTTGGTAAAAATGCAAAAATTA  1193
                                                        
seq2  --------------------------------------------------  1050

seq1  TACAAAAATATGGATAAGTTGTAAAAAAATTGATGGAAACAGGCTTGTAT  1243
                                                        
seq2  --------------------------------------------------  1050

seq1  TATTGAAGACGTAGAAAAATAATGTTCACTATTTGAGAAAGTAGAGATCT  1293
                                                        
seq2  --------------------------------------------------  1050

seq1  TCGTTGCAAGTTAAAATAGAAGATTTTATTAGAATGTATTTGTGAGATAA  1343
                                                        
seq2  --------------------------------------------------  1050

seq1  TTAAAAAAAATTATAAAAAATGTTTTAAAATGGAGGAATTCTTTGGAAAA  1393
                                                        
seq2  --------------------------------------------------  1050

seq1  CACTACTGGTAGAAAGGAATGCGTATTAAACATATTTTTCTAATAGGAGA  1443
                                                        
seq2  --------------------------------------------------  1050

seq1  AAATTGAGAGAAATATTATTTGATGAAATTCGAGATGTTCTAATACATTA  1493
                                                        
seq2  --------------------------------------------------  1050

seq1  TTTTTGATAAAAATGTAAGAAAACTACAGGAAAAAATGTGGTTAAAATGG  1543
                                                        
seq2  --------------------------------------------------  1050

seq1  ATGAAATTGATGGAAAAACAGGCTGTTCAAATGGAAAACTTAGAAAATTC  1593
                                                        
seq2  --------------------------------------------------  1050

seq1  ATGTTCACTATTTTCAAAACTATAGATCATCATATTACGATAAAATAAAA  1643
                                                        
seq2  --------------------------------------------------  1050

seq1  GATTATATTCGAATGTATTTGTGACAAAATTGAAAAAATATTTTAAAAAT  1693
                                                        
seq2  --------------------------------------------------  1050

seq1  GTGTTAAAATGGAAATAATAGATTGAAAAATCACCGGGTAAAGAGGAAAA  1743
                                                        
seq2  --------------------------------------------------  1050

seq1  CGTAGAAAACATATTCTTTTTCATTAGAGAAAAAGGAGAGAAACATTTTC  1793
                                                        
seq2  --------------------------------------------------  1050

seq1  TGATAAATTTCGAGATGTTCTTATACACTATATCTGATAAAAGTGAAAAC  1843
                                                        
seq2  --------------------------------------------------  1050

seq1  TGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGATTGAAAATCGATTG  1893
                                                        
seq2  --------------------------------------------------  1050

seq1  GTCAAATCGAAAATGGAGAAAACTCATGTTCACTATGAGAGACAGCTGAG  1943
                                                        
seq2  --------------------------------------------------  1050

seq1  GTCATCATTGTAAGATAGGGGAGTGCGAGGGAGGGTATGGGGGACTTTTG  1993
                                                        
seq2  --------------------------------------------------  1050

seq1  GGATTGAATTGGAAACGTAATTGAGGAAAATACCTAATTTTAAAAAAATA  2043
                                                        
seq2  --------------------------------------------------  1050

seq1  CAAGATGTTATTCAAATATATTTTTGAGAAAATTGACAAAATTTATAGAA  2093
                                                        
seq2  --------------------------------------------------  1050

seq1  AAATGTTTTATAATGGAAGAATTCGATGGAAAAACCTTCAGTTAGAAAGG  2143
                                                        
seq2  --------------------------------------------------  1050

seq1  AAAACAAAGAAAACATATTTTTCCTAATAGAGAAAATGGAGAGAATCATT  2193
                                                        
seq2  --------------------------------------------------  1050

seq1  TTCTGATAAAATTCGAGATGTTCTTAAACAGCATTTGGATAAAAAGAAAA  2243
                                                        
seq2  --------------------------------------------------  1050

seq1  AAAAAATTACAATAAATGAGGAAAAATGGAGGAATTTGATAGAAAAAAAA  2293
                                                        
seq2  --------------------------------------------------  1050

seq1  CCTGGTCAAATGGAAAACAGGGAAAACTCATGTTCACAAGTTTGCAAAGA  2343
                                                        
seq2  --------------------------------------------------  1050

seq1  AGAGATCAATATTTTAATATAAAAATACAAGATTGAATTGAATTTATTAT  2393
                                                        
seq2  --------------------------------------------------  1050

seq1  GAGAAAGTTGACCAAATTAATACAAAAATGTGTTAAAATGGAAGAATTC  2442
                                                       
seq2  -------------------------------------------------  1050

seq1: chrX_123302443_123304655
seq2: B6Ng01-341L23.g_66_905

seq1  GAATTCTTTGGAAAACACTACTGGTAGAAAGGAATGCGTATTAAACATAT  50
      |||||||||||||||| ||||||||||||||||| |||||||||||||||
seq2  GAATTCTTTGGAAAACGCTACTGGTAGAAAGGAAAGCGTATTAAACATAT  50

seq1  TTTTCTAATAGGAGAAAATTGAGAGAAACATTATTTGATGAAATTCGAGA  100
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTCTAATAGGAGAAAATTGAGAGAAATATTATTTGATGAAATTCGAGA  100

seq1  TGTTCTAATACATTATTTCTGATAAAAATGTAAGAAAACTACAGGAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAATACATTATTTCTGATAAAAATGTAAGAAAACTACAGGAAAAA  150

seq1  ATGTGGTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTTCAAATGGA  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTTCAAATGGA  200

seq1  AAACTTAGAAAATTCATGTTCACTATTTTCAAAACTAGAGATCATCATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAGAAAATTCATGTTCACTATTTTCAAAACTAGAGATCATCATAT  250

seq1  TACGATAAAATAAAAGATTATATTCGAATGTATTTGTGACAAAATTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGATAAAATAAAAGATTATATTCGAATGTATTTGTGACAAAATTGAAA  300

seq1  AAAATATTTTAAAAACGTGTTAAAATGTAAATAATAGATTGAAAAATCAC  350
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  AAAATATTTTAAAAATGTGTTAAAATGGAAATAATAGATTGAAAAATCAC  350

seq1  CGGGTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTAGAGAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTAGAGAAAAA  400

seq1  GGATAGAAACATTTTCTGATAAATTTCGAGATGTTCTTATACACTATTTC  450
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAAACATTTTCTGATAAATTTCGAGATGTTCTTATACACTATTTC  450

seq1  TGATAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATT  500
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAA-TGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATT  499

seq1  GATTGAAAAACGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAAAAACGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACT  549

seq1  ATGAGAGACAGCTGATGTGATCATTGTAAGATAGGGTAGTGCGAGGGAGG  600
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATGAGAGACAGCTGATGTGATCATTGTAAGATAGGGGAGTGCGAGGGAGG  599

seq1  GTATGGGGGACTTTTGGGATAGAATTGGAAACGTAATTGAGGAAAATATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGGGACTTTTGGGATAGAATTGGAAACGTAATTGAGGAAAATATC  649

seq1  TAATTTTAAAAAAATACAAAATGTTATTCAAATATATTTTTGAGAAAATT  700
      ||||||||||||| ||||| ||||||||||||| ||||||||||||||||
seq2  TAATTTTAAAAAATTACAAGATGTTATTCAAATGTATTTTTGAGAAAATT  699

seq1  GACAAAATTTATAG-AAAAATGTTTTATAATGGAAGAATTCGATGG---A  746
      ||||||| |||||| |||||||||||||||||||||||||||||||   |
seq2  GACAAAACTTATAGAAAAAATGTTTTATAATGGAAGAATTCGATGGGAAA  749

seq1  AAAACCTTCAGTTA-CAATGGAAAACAAAGGAAACATATTTTT---CCTA  792
      ||| ||||||||||  || ||||| ||||| ||||||||||||   ||||
seq2  AAACCCTTCAGTTAGAAAAGGAAAGCAAAGAAAACATATTTTTTGCCCTA  799

seq1  ATAGA-GAAAATGG-AGAG-AATCA-TTTTCTGATAAAATTCGAGATGTT  838
       |||| |||||||| |||| ||||| |||| ||||||||||         
seq2  TTAGAGGAAAATGGAAGAGAAATCATTTTTTTGATAAAATT---------  840

seq1  CTTAAACAGCATTTGGATAAAAAGAAAAAAATTACAATAAACATGGAAAA  888
                                                        
seq2  --------------------------------------------------  840

seq1  ATGGAGGAATTTGATAGAAAAAAAAACCTGGTCAAATGGAAAACAGGGAA  938
                                                        
seq2  --------------------------------------------------  840

seq1  AACTCATGTTCACAAGTTTGCAAAGAAGAGATCAATATTTTAATATAAAC  988
                                                        
seq2  --------------------------------------------------  840

seq1  ATACAAGATTGAATTGAATTTATTATGAGAAAGTTGACCAAATTAATACA  1038
                                                        
seq2  --------------------------------------------------  840

seq1  AAAATGTGTTAAAATGGAAGAATTCAATGAAAAAAAAACTACTGGTAGAA  1088
                                                        
seq2  --------------------------------------------------  840

seq1  AGGCAAACATAGAAAACCTGTTTTTCCTATTAGAAAAATTGGATAGAAAC  1138
                                                        
seq2  --------------------------------------------------  840

seq1  ATTTTCTGATAAAATTCGAGATGTTCTTATACAGCATATTTGGTAAAAAT  1188
                                                        
seq2  --------------------------------------------------  840

seq1  GCAAAAATTATACAAAAATATGGATAAGTTGTAAAAAAATTGATGGAAAA  1238
                                                        
seq2  --------------------------------------------------  840

seq1  AGGCTTGTATTATTGAAGACGTAGAAAAATAATGTTCACTATTTGAGAGA  1288
                                                        
seq2  --------------------------------------------------  840

seq1  GTAGAGATCTTCATTGCAAGTTAAAATAGAGATTTTATTAGAATGTATTT  1338
                                                        
seq2  --------------------------------------------------  840

seq1  GTGAGAAAATTGAAAAAAAATTATAAAAAATGTTTTAAAATGGAGGAATT  1388
                                                        
seq2  --------------------------------------------------  840

seq1  CTTTGGAAAACACTACTGGTAGAAAGGAATGCGTATTAAACATATTTTTC  1438
                                                        
seq2  --------------------------------------------------  840

seq1  TAATAGGAGAAAATTGAGAGAAACATTATTTGATGAAATTCGAGATGTTC  1488
                                                        
seq2  --------------------------------------------------  840

seq1  TAATACATTATTTCTGATAAAAATGTAAGAAAACTACAGGAAAAAATGTG  1538
                                                        
seq2  --------------------------------------------------  840

seq1  GTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTTCAAATGGAAAACT  1588
                                                        
seq2  --------------------------------------------------  840

seq1  TAGAAAATTCATGTTCACTATTTTCAAAACTATAGATCATCATATTACGA  1638
                                                        
seq2  --------------------------------------------------  840

seq1  TAAAATAAAAGATTATATTCGAATGTATTTGTGACAAAATTGAAAAAAAA  1688
                                                        
seq2  --------------------------------------------------  840

seq1  TATTTTAAAAACGTGTTAAAATGGAAATAATAGATTGAAAAATCACCGGG  1738
                                                        
seq2  --------------------------------------------------  840

seq1  TAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTAGAGAAAAAGGAG  1788
                                                        
seq2  --------------------------------------------------  840

seq1  AGAAACATTTTCTGATAAATTTTGAGATGTTCTTATACACTATTTCTGAT  1838
                                                        
seq2  --------------------------------------------------  840

seq1  AAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGATT  1888
                                                        
seq2  --------------------------------------------------  840

seq1  GAAAAACGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATGA  1938
                                                        
seq2  --------------------------------------------------  840

seq1  GAGACAGCTGAGGTCATCATTGTAAGATAGGGGAGTGCGAGGGAGGGTAT  1988
                                                        
seq2  --------------------------------------------------  840

seq1  GGGGGACTTTTGGGATAGAATTGGAAACGTAATTGAGGAAAATACCTAAT  2038
                                                        
seq2  --------------------------------------------------  840

seq1  TTAAAAAAAATACAAGATGTTATTCAAATATATTTTTGAGAAAATTGACA  2088
                                                        
seq2  --------------------------------------------------  840

seq1  AAATTTATAGAAAAATGTTTTATAATGGAAGAATTCGATGGAAAAACCTT  2138
                                                        
seq2  --------------------------------------------------  840

seq1  CAGTTAGAAAGGAAAACAAAGAAAACATATTTTTCCTAATAGAGAAAATG  2188
                                                        
seq2  --------------------------------------------------  840

seq1  GAGAGAATCATTTTCTGATAAAATT  2213
                               
seq2  -------------------------  840

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Alignment Information