MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-342I16
Chromosome	X (Build37)
Map Location	123,302,114 - 123,307,660
singlet/doublet	doublet
Overlap gene	none
Upstream gene	EG665611, EG626048, LOC100040410, LOC100039903, LOC665679
Downstream gene	4932411N23Rik, Gm381, LOC100040472, Gm382, 4921511C20Rik, 4930412D23Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG665611 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665611 MGI:3646259
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 981 ESTs, 7 Proteins

name	EG626048 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626048 MGI:3645883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 937 ESTs, 7 Proteins

name	LOC100040410 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040410
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein

name	LOC100039903 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 86 ESTs

name	LOC665679 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665679
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	4932411N23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237029 MGI:3045322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm381 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214308 MGI:2685227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100040472 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Gm382 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211208 MGI:2685228
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921511C20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245598 MGI:2685229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	4930412D23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73934 MGI:1921184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins

name	EG665611 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272237 GeneID:665611 MGI:3646259
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 981 ESTs, 7 Proteins product : predicted gene, EG665611 transcript_id : XM_978135.2

name	EG626048 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408243 GeneID:626048 MGI:3645883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 936 ESTs, 7 Proteins product : predicted gene, EG626048, transcript variant 2 transcript_id : XM_890604.2

name	EG626048 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272238 GeneID:626048 MGI:3645883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 420 ESTs, 7 Proteins product : predicted gene, EG626048, transcript variant 1 transcript_id : XM_001473380.1

name	LOC100040410 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272248 GeneID:100040410
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : similar to RIKEN cDNA 3110007F17 gene transcript_id : XM_001474637.1

name	LOC100039903 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272240 GeneID:100039903
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 86 ESTs product : hypothetical protein LOC100039903 transcript_id : XM_001473395.1

name	4932411N23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343243 GeneID:237029 MGI:3045322
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932411N23 gene transcript_id : NM_177705.2

name	Gm381 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20985343 GeneID:214308 MGI:2685227
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : gene model 381, (NCBI) transcript_id : XM_142110.1

name	LOC100040472 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272250 GeneID:100040472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : similar to pol protein transcript_id : XM_001474744.1

name	Gm382 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802851 GeneID:211208 MGI:2685228
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 382, (NCBI) transcript_id : NM_001033241.2

name	4930412D23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272242 GeneID:73934 MGI:1921184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins product : RIKEN cDNA 4930412D23 gene transcript_id : XM_001473476.1

name	EG665611 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94408240 GeneID:665611 MGI:3646259
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 protein_id : XP_983229.1

name	EG626048 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272239 GeneID:626048 MGI:3645883
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 isoform 1 protein_id : XP_001473430.1

name	EG626048 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83003650 GeneID:626048 MGI:3645883
definition	codon_start : 1 product : similar to 40S ribosomal protein S12 isoform 2 protein_id : XP_895697.1

name	LOC100040410 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272249 GeneID:100040410
definition	codon_start : 1 product : similar to RIKEN cDNA 3110007F17 gene protein_id : XP_001474687.1

name	LOC100039903 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272241 GeneID:100039903
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473445.1

name	4932411N23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244162 CCDS:CCDS30382.1 GeneID:237029 MGI:3045322
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 note : novel Myb-like DNA-binding domain containing protein product : hypothetical protein LOC237029 protein_id : NP_808373.1

name	Gm381 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20985344 GeneID:214308 MGI:2685227
definition	codon_start : 1 product : similar to novel gene coding for a KH domain containing protein protein_id : XP_142110.1

name	LOC100040472 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272251 GeneID:100040472
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001474794.1

name	Gm382 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701740 GeneID:211208 MGI:2685228
definition	GO_function : GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC211208 protein_id : NP_001028413.1

name	4930412D23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272243 GeneID:73934 MGI:1921184
definition	codon_start : 1 product : hypothetical protein LOC73934 protein_id : XP_001473526.1

name	LOC665679 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665679
definition	number : 2 pseudo : _no_value

name	LOC665679 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665679
definition	number : 1 pseudo : _no_value

name	4921511C20Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272234 GeneID:245598 MGI:2685229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921511C20 gene pseudo : _no_value transcript_id : XR_035167.1

clone name	MSMg01-195N23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-524F05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-304N06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-079F14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-098J13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-140A21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-158N04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-181N24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-357B18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-412F23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-453F03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-453O14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-518L08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-262O21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-101C05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-368J06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-386G14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-500N14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-511L11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-523O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015E17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-342I16.b	B6Ng01-342I16.g
ACC	GA125594	GA125595
length	1,121	1,014
definition	B6Ng01-342I16.b	B6Ng01-342I16.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(123,304,067 - 123,307,660)	(123,302,114 - 123,312,522)
sequence	gaattcctccattttaaaacattttttataattttttcaattttctcaca aatacattctaataaaatcttctattttaacttgcaacgaagatctctac tttctcaaatagtgaacattatttttctatgtcttcaataatacaagcct ttttccataaatttttatacaacttatccaaatttttgtataatttttgc atttttaccaaatatgctgtataagaacatctcgaattttatcagaaaat gattctatccaatttttctaataggaaaaacaggttttctatgtttgcct ttctaccagtagtttttttttttcattgaattcttccattttaacacatt tttgtattaatttggtcaactttctcataataaattcaattcaatcatgt atgtttatattaaaatattgatctcttctttgcaaaacttgtgaacatga gttttccctgttttccatttgaccaggtttttttttctatcaaattcctc catttttccacgtttattgtaattttttactttttatccaaatgctgttt aagaacatttcgaattttatcagaaaatgattctctccattttctctatt aggaaaaatatgttttctttgttttcctttctaactgaaggtttttccat cgaattcttccattataaaacatttttctataaattttgtcaattttctc aaaaatatatttgaataacatcttgtattttttttaaattaggtattttc ctcaattacgtttccaattctatcccaaaagtcccccataccctccctcg cactcccctatcttacaatgatgacctcagctgtctctcatagtgaacat gagttttctccattttcgatttgaccaatcgtttttcaatcaatttcctc cattttaaccacatttttctgtacagttttcactttatcagaaaatagtg tatagacatctcgaaatttatcagagatgtttctctcctttttctctatg aaagaatatgtttctacgtttcctcttacccggtgattttcatctatatc atttacacgttaatattttttttcatttgtccaatcattcgaatatatct ttaatttatcgtaatggatga	gaattcaatgaaaaaaaaaactactggtagaaaggtaaacatagaaaact tgtttttcctattagaaaaattggatagaaacattttctgataaaattcg agatgttctcatacagcatatttggtaaaaatgcaaaaattataaaaaaa atacacagaaattgtaaaaaaattgatggaaaaaggcttgtattattcaa gacgtagaaaaatcatgttcactatttgagaaagtagagatcttcgttgc aagttaaaatagacgattttcgtagaatgtatttgtgagaaaattgaaaa aaattataaaaaaatgttttaaaatggaggaattctttggaaaacactac tggtagaaaggaaagcgtattaaacatatttttcttttagtagaaaattg agagaaacattatttgatgaaattcgagatgttctaatacattatttctg ataaaaatgtaagaaaactataggaaaaaatgtggttaaaatggatgaaa ttgatgggaaaacaggctgttcaaatggaaaacttagaaaattcatgttc actatttgcaaaagcagagatcatcatattatgatgaaataaaagattat attcgaatgcatttgtgacaaaattgaaaaaatattttaaaaatgtgtta aaatggaaataatagatgaaaaaacaccgggtaaagaggacaacgtagaa aacatattctttttcattagagaaaaaggagagcaacattttctgataaa tttcgagatgttcttatacattatttctgataaaagtgaaaactacggaa aaatgtggttaaaatggaggaaattgtttgaaaaagcgattggtgaaatc gaaaatggagaaaactcatgttcactatgtgagaaagcagaggtcatcat gtagataggggagtgggaggcaggtattggggacttttgggatagaatgg aaacgtattgaggaaatacctaattttaaatactgatgttattcatgtat tttagaaatgacaa
quality values	Open. Hide. 62 47 38 31 62 62 62 62 62 39 24 62 62 62 47 56 62 62 62 43 44 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 59 43 59 62 62 62 62 62 54 59 59 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 54 54 62 62 54 54 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 54 54 62 59 59 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 56 43 46 59 56 49 54 56 54 56 56 43 34 56 59 46 62 62 62 59 62 62 62 59 62 59 62 62 62 62 54 62 59 59 59 56 62 56 59 59 59 62 62 59 62 59 62 62 62 62 62 62 59 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 56 62 62 56 56 56 56 62 50 56 62 56 56 56 56 62 62 56 62 56 56 56 56 56 50 50 62 51 62 62 62 62 54 54 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 56 56 56 56 62 56 56 62 62 56 62 62 52 62 62 62 52 52 62 62 52 62 62 62 62 43 52 46 52 62 38 62 62 62 62 62 62 62 40 62 62 52 52 58 54 48 52 52 54 42 40 52 52 48 54 52 52 54 52 52 40 48 52 30 46 38 52 50 48 52 52 52 47 52 52 54 52 47 44 52 45 52 48 40 58 54 54 54 40 58 54 31 52 54 52 58 54 54 42 37 44 47 47 42 52 52 58 42 48 48 30 42 33 39 48 52 58 58 50 46 51 49 58 41 47 48 40 50 51 58 50 58 49 51 50 32 48 46 42 50 48 50 32 41 50 48 48 48 51 32 37 39 16 50 50 50 48 52 47 31 50 58 32 49 50 40 31 50 43 40 51 50 40 51 50 50 37 49 58 58 49 40 50 51 58 58 47 50 40 24 43 41 32 58 40 43 39 30 42 54 33 39 32 37 51 58 58 41 52 37 33 20 54 46 54 49 37 45 38 40 50 44 40 37 54 36 32 51 35 37 39 45 53 42 32 54 30 34 34 54 54 51 47 49 45 19 28 47 52 32 29 42 29 51 20 39 28 54 54 41 53 53 42 33 18 44 38 35 40 41 40 39 54 30 37 45 18 37 31 41 34 35 34 32 34 53 25 19 46 49 42 32 31 39 51 49 49 34 31 34 25 18 51 52 31 45 53 53 31 31 28 28 33 30 28 39 51 51 38 29 31 27 30 30 28 30 21 25 25 21 37 31 30 32 31 26 43 31 30 29 31 33 32 41 28 42 32 31 26 31 31 31 38 32 13 30 32 43 30 25 21 31 31 14 11 46 48 37 32 25 30 32 22 31 46 48 22 31 18 31 18 46 29 34 35 32 32 22 26 32 31 20 18 46 46 46 24 31 24 25 27 30 19 29 29 48 27 19 25 18 27 28 23 23 48 48 29 20 18 28 24 19 26 18 32 48 48 48 31 22 13 25 11 16 18 21 31 31 44 44 26 27 17 24 33 48 31 6 15 31 31 10 12 40 39 17 16 24 27 19 26 11 34 17 34 9 16 4 11 32 32 19 27 14 23 43 14 24 29 7 23 22 21 15 11 9 5 9 17 32 21 32 20 7 3 5 10 10 21 13 40 40 34 16 9 6 9 16 30 10 18 27 19 17 7 22 16 16 13 20 28 10 21 8 11 9 11 27 18 29 47 21 22 17 17 16 16 19 11 11 28 9 16 10 8 16 20 9 21 21 15 12 18 6 13 5 7 22 5 4 3 3 21 30 15 6 3 5 6 6 4 3 3 3 2 4 13 28 28 28 30 28 27 15 16 8 17 29 13 21 9 9 4 3 18 9 5 4 6 8 23 9 24 10 16 10 9 25 7 8 13 29 25 5 5 9 15 7 9 9 19 6 4 14 3 5 4 4 6 8 16 4	Open. Hide. 62 47 56 47 62 59 44 62 62 62 62 62 62 62 49 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 54 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 56 42 54 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 56 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 54 62 62 62 62 58 58 58 54 46 58 58 58 58 54 58 58 58 54 58 58 58 58 58 58 54 54 52 58 58 58 58 58 58 58 58 52 54 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 54 58 58 52 58 58 58 58 58 52 58 58 54 58 58 58 58 53 53 58 58 58 48 58 54 53 58 50 37 42 58 50 58 58 52 58 52 58 51 50 53 58 51 45 58 58 58 58 49 47 58 58 58 52 47 41 49 50 53 53 58 58 58 26 58 54 50 54 46 32 41 58 51 58 52 51 43 50 39 58 58 37 52 58 50 58 58 58 58 58 31 42 52 53 58 58 41 37 58 58 58 43 50 49 34 53 52 41 39 58 58 40 38 58 41 53 54 35 42 53 42 53 53 36 46 30 41 53 54 54 54 54 40 49 30 54 51 34 51 51 32 35 54 35 42 53 40 49 31 31 35 40 51 44 35 51 26 53 54 54 40 37 34 53 37 37 45 45 33 54 54 54 32 37 22 51 52 37 37 51 32 51 54 54 49 25 31 52 40 31 41 26 32 29 32 34 29 45 53 53 36 52 32 42 33 22 40 53 35 34 53 42 36 28 45 40 45 31 45 26 33 51 38 42 31 33 33 42 25 42 41 32 31 51 34 42 31 33 31 23 33 51 51 33 29 34 39 31 46 46 32 32 31 33 37 8 33 22 46 46 46 32 28 43 24 38 37 31 32 30 48 48 31 31 33 25 30 11 37 31 46 27 21 30 31 13 47 31 27 28 48 47 47 30 24 31 21 31 22 21 37 34 31 42 37 48 25 31 31 18 41 48 48 32 32 33 27 32 26 33 48 48 31 30 32 34 22 32 38 21 25 33 21 32 26 31 31 32 32 35 34 22 32 48 31 11 29 15 9 25 10 25 21 31 17 27 33 13 43 7 5 29 12 29 16 15 21 48 43 22 14 9 21 17 48 30 33 21 23 15 9 26 25 12 11 20 9 30 43 43 24 8 11 32 39 43 9 17 32 19 6 7 6 5 21 14 21 8 14 15 22 13 24 16 14 30 16 16 28 21 21 13 28 29 18 6 5 20 21 28 9 13 22 38 38 12 3 3 5 8 10 15 14 8 13 10 27 9 6 5 8 19 6 11 3 12 9 17 10 18 34 24 4 5 9 19 7 3 9 6 9 21 24

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_123304067_123307660
seq2: B6Ng01-342I16.b_45_1165 (reverse)

seq1  TCATCATATTACGATAAAATAAAAGATTATATTCGAATGTATTTGTGACA  50
      |||||  |||||||| |||| ||||| |||||||||||| |||   ||||
seq2  TCATC-CATTACGAT-AAATTAAAGA-TATATTCGAATG-ATT--GGACA  44

seq1  AAATTGAAAAAAAATATTTTAAAAACGTGTTAAAATGGAAATAATAGATT  100
      ||  ||||||||||||||     |||||||  |||||   || |||||| 
seq2  AA--TGAAAAAAAATATT-----AACGTGT--AAATG---AT-ATAGAT-  80

seq1  GAAAAATCACCGGGTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCAT  150
        ||||||||||||| |||||| |||||||| ||||||||||  ||||| 
seq2  -GAAAATCACCGGGT-AAGAGG-AAACGTAG-AAACATATTC--TTTCA-  123

seq1  TAGAGAAAAAGGAGAGAAACATTTTCTGATAAATTTTGAGATGTTCTTAT  200
      ||||||||||||||||||||| | |||||||||||| |||||||   |||
seq2  TAGAGAAAAAGGAGAGAAACA-TCTCTGATAAATTTCGAGATGT--CTAT  170

seq1  ACACTA-TTTCTGATAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAA  249
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  ACACTATTTTCTGAT-AAAGTGAAAACTGTACAGAAAAATGTGGTTAAAA  219

seq1  TGGAGGAAATTGATTGAAAAACGATTGGTCAAATCGAAAATGGAGAAAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAATTGATTGAAAAACGATTGGTCAAATCGAAAATGGAGAAAAC  269

seq1  TCATGTTCACTATGAGAGACAGCTGAGGTCATCATTGTAAGATAGGGGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTCACTATGAGAGACAGCTGAGGTCATCATTGTAAGATAGGGGAG  319

seq1  TGCGAGGGAGGGTATGGGGGACTTTTGGGATAGAATTGGAAACGTAATTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAGGGAGGGTATGGGGGACTTTTGGGATAGAATTGGAAACGTAATTG  369

seq1  AGGAAAATACCTAATTTAAAAAAAATACAAGATGTTATTCAAATATATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAATACCTAATTTAAAAAAAATACAAGATGTTATTCAAATATATTT  419

seq1  TTGAGAAAATTGACAAAATTTATAGAAAAATGTTTTATAATGGAAGAATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAAATTGACAAAATTTATAGAAAAATGTTTTATAATGGAAGAATT  469

seq1  CGATGGAAAAACCTTCAGTTAGAAAGGAAAACAAAGAAAACATATTTTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGGAAAAACCTTCAGTTAGAAAGGAAAACAAAGAAAACATATTTTTC  519

seq1  CTAATAGAGAAAATGGAGAGAATCATTTTCTGATAAAATTCGAAATGTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAGAGAAAATGGAGAGAATCATTTTCTGATAAAATTCGAAATGTTC  569

seq1  TTAAACAGCATTTGGATAAAAAGTAAAAAATTACAATAAACGTGGAAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAGCATTTGGATAAAAAGTAAAAAATTACAATAAACGTGGAAAAA  619

seq1  TGGAGGAATTTGATAGAAAAAAAAACCTGGTCAAATGGAAAACAGGGAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAATTTGATAGAAAAAAAAACCTGGTCAAATGGAAAACAGGGAAA  669

seq1  ACTCATGTTCACAAGTTTTGCAAAGAAGAGATCAATATTTTAATATAAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGTTCACAAGTTTTGCAAAGAAGAGATCAATATTTTAATATAAAC  719

seq1  ATACATGATTGAATTGAATTTATTATGAGAAAGTTGACCAAATTAATACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGATTGAATTGAATTTATTATGAGAAAGTTGACCAAATTAATACA  769

seq1  AAAATGTGTTAAAATGGAAGAATTCAATGAAAAAAAAAAAACTCCTGGTA  849
      ||||||||||||||||||||||||||||| ||||||||||||| ||||||
seq2  AAAATGTGTTAAAATGGAAGAATTCAATG-AAAAAAAAAAACTACTGGTA  818

seq1  GAAAGGCAAACATAGAAAACCTGTTTTTCCTATTAGAAAAATTGGATAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCAAACATAGAAAACCTGTTTTTCCTATTAGAAAAATTGGATAGA  868

seq1  AACATTTTCTCATAAAATTCGAGATGTTCTTATACAGCATATTTGGTAAA  949
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTCTGATAAAATTCGAGATGTTCTTATACAGCATATTTGGTAAA  918

seq1  AATGCAAAAATTATACAAAAATATGGATAAGTTGTAAAAAAATTGATGGA  999
      |||||||||||||||||||||| ||||||||||||| ||||||| |||||
seq2  AATGCAAAAATTATACAAAAATTTGGATAAGTTGTATAAAAATTTATGGA  968

seq1  AACAGGCTTGTATTATTGAAGACGTAGAAAAATAATGTTCACTATTTGAG  1049
      || |||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAAAGGCTTGTATTATTGAAGACATAGAAAAATAATGTTCACTATTTGAG  1018

seq1  AAAGTAGAGATCTTCGTTGCAAGTTAAAATAGAAGATTTTATTAGAATGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGAGATCTTCGTTGCAAGTTAAAATAGAAGATTTTATTAGAATGT  1068

seq1  ATTTGTGAGATAATTAAAAAAAATTATAAAAAATGTTTTAAAATGGAGGA  1149
      |||||||||| ||||  |||||||||||||||||||||||||||||||||
seq2  ATTTGTGAGAAAATT-GAAAAAATTATAAAAAATGTTTTAAAATGGAGGA  1117

seq1  ATTCTTTGGAAAACACTACTGGTAGAAAGGAATGCGTATTAAACATATTT  1199
      ||||                                              
seq2  ATTC----------------------------------------------  1121

seq1  TTCTAATAGGAGAAAATTGAGAGAAATATTATTTGATGAAATTCGAGATG  1249
                                                        
seq2  --------------------------------------------------  1121

seq1  TTCTAATACATTATTTTTGATAAAAATGTAAGAAAACTACAGGAAAAAAT  1299
                                                        
seq2  --------------------------------------------------  1121

seq1  GTGGTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTTCAAATGGAAA  1349
                                                        
seq2  --------------------------------------------------  1121

seq1  ACTTAGAAAATTCATGTTCACTATTTTCAAAACTATAGATCATCATATTA  1399
                                                        
seq2  --------------------------------------------------  1121

seq1  CGATAAAATAAAAGATTATATTCGAATGTATTTGTGACAAAATTGAAAAA  1449
                                                        
seq2  --------------------------------------------------  1121

seq1  ATATTTTAAAAATGTGTTAAAATGGAAATAATAGATTGAAAAATCACCGG  1499
                                                        
seq2  --------------------------------------------------  1121

seq1  GTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTAGAGAAAAAGGA  1549
                                                        
seq2  --------------------------------------------------  1121

seq1  GAGAAACATTTTCTGATAAATTTCGAGATGTTCTTATACACTATATCTGA  1599
                                                        
seq2  --------------------------------------------------  1121

seq1  TAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGAT  1649
                                                        
seq2  --------------------------------------------------  1121

seq1  TGAAAATCGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATG  1699
                                                        
seq2  --------------------------------------------------  1121

seq1  AGAGACAGCTGAGGTCATCATTGTAAGATAGGGGAGTGCGAGGGAGGGTA  1749
                                                        
seq2  --------------------------------------------------  1121

seq1  TGGGGGACTTTTGGGATTGAATTGGAAACGTAATTGAGGAAAATACCTAA  1799
                                                        
seq2  --------------------------------------------------  1121

seq1  TTTTAAAAAAATACAAGATGTTATTCAAATATATTTTTGAGAAAATTGAC  1849
                                                        
seq2  --------------------------------------------------  1121

seq1  AAAATTTATAGAAAAATGTTTTATAATGGAAGAATTCGATGGAAAAACCT  1899
                                                        
seq2  --------------------------------------------------  1121

seq1  TCAGTTAGAAAGGAAAACAAAGAAAACATATTTTTCCTAATAGAGAAAAT  1949
                                                        
seq2  --------------------------------------------------  1121

seq1  GGAGAGAATCATTTTCTGATAAAATTCGAGATGTTCTTAAACAGCATTTG  1999
                                                        
seq2  --------------------------------------------------  1121

seq1  GATAAAAAGAAAAAAAAAATTACAATAAATGAGGAAAAATGGAGGAATTT  2049
                                                        
seq2  --------------------------------------------------  1121

seq1  GATAGAAAAAAAACCTGGTCAAATGGAAAACAGGGAAAACTCATGTTCAC  2099
                                                        
seq2  --------------------------------------------------  1121

seq1  AAGTTTGCAAAGAAGAGATCAATATTTTAATATAAAAATACAAGATTGAA  2149
                                                        
seq2  --------------------------------------------------  1121

seq1  TTGAATTTATTATGAGAAAGTTGACCAAATTAATACAAAAATGTGTTAAA  2199
                                                        
seq2  --------------------------------------------------  1121

seq1  ATGGAAGAATTCAATGAAAAAAAAACTACTGGTAGAAAGGCAAACATAGA  2249
                                                        
seq2  --------------------------------------------------  1121

seq1  AAACCTGTTTTTCCTATTAGAAAAATTGGATAGAAACATTTTCTGGTAAA  2299
                                                        
seq2  --------------------------------------------------  1121

seq1  ATTCGAGATGTTCTTATACAGCATATTTGGTAAAAATGCAAAAATTATAC  2349
                                                        
seq2  --------------------------------------------------  1121

seq1  AAAAATATGGATAAGTTGTATAAAAATTTATGGAAAAAGGCTTGTATTAT  2399
                                                        
seq2  --------------------------------------------------  1121

seq1  TGAAGACGTAGAAAAATAATGTTCACTATTTGAGAAAGTAGAGATCTTCG  2449
                                                        
seq2  --------------------------------------------------  1121

seq1  TTGCAAGTTAAAATAGAAGATTTTATTAGAATGTATTTGTGAGAAAATTG  2499
                                                        
seq2  --------------------------------------------------  1121

seq1  AAAAAAAATATAAAAAAATGTTTTAAAATGGAGGAATTCTTTGGAAAACA  2549
                                                        
seq2  --------------------------------------------------  1121

seq1  CTACTGGTAGAAAGGAATGCGTATTAAACATATTTTTCTAATAGGAGAAA  2599
                                                        
seq2  --------------------------------------------------  1121

seq1  ATTGAGAGAAACATTATTTGATGAAATTCGAGATGTTCTAATACATTATT  2649
                                                        
seq2  --------------------------------------------------  1121

seq1  TCTGGAAAAAATGTAAGAAAACTACAGGAAAAAATGTGGTTAAAATGGAG  2699
                                                        
seq2  --------------------------------------------------  1121

seq1  GAAATTGATTGAAAAACGATTGGTGATATCGAAAATGGAGAAAACTCATG  2749
                                                        
seq2  --------------------------------------------------  1121

seq1  TTCACTATGAGAGAAAGCTGAGGTCATCAATGTAAGATAAGGGAGTGCGA  2799
                                                        
seq2  --------------------------------------------------  1121

seq1  GGGAGGGTATGGGGTACTTTTGGGATAGAATTTGAAACGTAATTGAGGAA  2849
                                                        
seq2  --------------------------------------------------  1121

seq1  AATACCTAATTTAATAAAAATACAAGATGGTATTCAAATATATTTTTGAG  2899
                                                        
seq2  --------------------------------------------------  1121

seq1  AAAATTGACAAAATTTATAGAAAAATGTTTTATAATGGAAGAATTCGATG  2949
                                                        
seq2  --------------------------------------------------  1121

seq1  GAAAAACCTTCAGTTAGAAAGGAAAACAAAGAAAACATATTTTTCCGAAT  2999
                                                        
seq2  --------------------------------------------------  1121

seq1  AGAGAAAATGGAGAGAATCATTTTCTGATAAAATTCGAGATGTTCTTAAA  3049
                                                        
seq2  --------------------------------------------------  1121

seq1  CAGCATTTGGATAAAAAGAAAAAAAAATTACAATAAATGAGGAAAAATGG  3099
                                                        
seq2  --------------------------------------------------  1121

seq1  AGGAATTTGATAGAAAAAAAACCTGGTCAAATGGAAAACAGGGAAAACTC  3149
                                                        
seq2  --------------------------------------------------  1121

seq1  ATGTTCACAAGTTTGCAAAGAAGAGATCAATATTTTAATATAAAAATACA  3199
                                                        
seq2  --------------------------------------------------  1121

seq1  AGATTGAATTGAATTTATTATGAGAAAATTGACCAAATTAATACAAAAAT  3249
                                                        
seq2  --------------------------------------------------  1121

seq1  GTGTTAAAATGGAAGAATTTAATGAAAAAAAACTACTGGTAGAAAGGCAA  3299
                                                        
seq2  --------------------------------------------------  1121

seq1  ACATAGAAAACCTGTTTTTTCTATTAGAAAAATTGGATAGAAACATTTTC  3349
                                                        
seq2  --------------------------------------------------  1121

seq1  TGATAAAATTCGAGATGTTCTTATACAGCATATTTGGTAAAAATGCAAAA  3399
                                                        
seq2  --------------------------------------------------  1121

seq1  ATTATACAAAAATATGGATAAGTTGTAAAAAAATTGATGGAAAAAGGCTA  3449
                                                        
seq2  --------------------------------------------------  1121

seq1  GTATTATTGAAGACGTAGAAAAATAATGTTCACTATTTGAGAAAGTAGAG  3499
                                                        
seq2  --------------------------------------------------  1121

seq1  ATCTTCGTTGCAAGTTAAAATAGAAGATTTTATTAGAATGTATCTGTGAG  3549
                                                        
seq2  --------------------------------------------------  1121

seq1  AATATTGAAAAAATTATAAAAAAATGTTTTAAAATGGAGGAATTC  3594
                                                   
seq2  ---------------------------------------------  1121

seq1: chrX_123302114_123312522
seq2: B6Ng01-342I16.g_66_1079

seq1  GAATTCAATGAAAAAAAAAAAACTCCTGGTAGAAAGGCAAACATAGAAAA  50
                                                        
seq2  --------------------------------------------------  0

seq1  CCTGTTTTTCCTATTAGAAAAATTGGATAGAAACATTTTCTGATAAAATT  100
                                                        
seq2  --------------------------------------------------  0

seq1  CGAGATGTTCTTATACAGCATATTTGGTAAAAATGCAAAAATTATACAAA  150
                                                        
seq2  --------------------------------------------------  0

seq1  AATATGGATAAGTTGTAAAAAAATTGATGGAAAAAGGCTTGTATTATTGA  200
                                                        
seq2  --------------------------------------------------  0

seq1  AGACGTAGAAAAATAATGTTCACTATTTGAGAAAGTAGAGATCTTCGTTG  250
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGTTAAAATAGAAGATTTTATTAGAATGTATTTGTGAGATAATTAAAA  300
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATTATAAAAAATGTTTTAAAATGGAGGAATTCTTTGGAAAACACTAC  350
                                                        
seq2  --------------------------------------------------  0

seq1  TGGTAGAAAGGAATGCGTATTAAACATATTTTTCTAATAGGAGAAAATTG  400
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGAAACATTATTTGATGAAATTCGAGATGTTCTAATACATTATTTCTG  450
                                                        
seq2  --------------------------------------------------  0

seq1  ATAAAAATGTAAGAAAACTACAGGAAAAAATGTGGTTAAAATGGATGAAA  500
                                                        
seq2  --------------------------------------------------  0

seq1  TTGATGGAAAAACAGGCTGTTCAAATGGAAAACTTAGAAAATTCATGTTC  550
                                                        
seq2  --------------------------------------------------  0

seq1  ACTATTTTCAAAACTAGAGATCATCATATTACGATAAAATAAAAGATTAT  600
                                                        
seq2  --------------------------------------------------  0

seq1  ATTCGAATGTATTTGTGACAAAATTGAAAAAAATATTTTAAAAACGTGTT  650
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATGTAAATAATAGATTGAAAAATCACCGGGTAAAGAGGAAAACGTAG  700
                                                        
seq2  --------------------------------------------------  0

seq1  AAAACATATTCTTTTTCATTAGAGAAAAAGGATAGAAACATTTTCTGATA  750
                                                        
seq2  --------------------------------------------------  0

seq1  AATTTCGAGATGTTCTTATACACTATTTCTGATAAAAGTGAAAACTGTAC  800
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAAAATGTGGTTAAAATGGAGGAAATTGATTGAAAAACGATTGGTCAA  850
                                                        
seq2  --------------------------------------------------  0

seq1  ATCGAAAATGGAGAAAACTCATGTTCACTATGAGAGACAGCTGATGTGAT  900
                                                        
seq2  --------------------------------------------------  0

seq1  CATTGTAAGATAGGGTAGTGCGAGGGAGGGTATGGGGGACTTTTGGGATA  950
                                                        
seq2  --------------------------------------------------  0

seq1  GAATTGGAAACGTAATTGAGGAAAATATCTAATTTTAAAAAAATACAAAA  1000
                                                        
seq2  --------------------------------------------------  0

seq1  TGTTATTCAAATATATTTTTGAGAAAATTGACAAAATTTATAGAAAAATG  1050
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTATAATGGAAGAATTCGATGGAAAAACCTTCAGTTACAATGGAAAAC  1100
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGGAAACATATTTTTCCTAATAGAGAAAATGGAGAGAATCATTTTCTG  1150
                                                        
seq2  --------------------------------------------------  0

seq1  ATAAAATTCGAGATGTTCTTAAACAGCATTTGGATAAAAAGAAAAAAATT  1200
                                                        
seq2  --------------------------------------------------  0

seq1  ACAATAAACATGGAAAAATGGAGGAATTTGATAGAAAAAAAAACCTGGTC  1250
                                                        
seq2  --------------------------------------------------  0

seq1  AAATGGAAAACAGGGAAAACTCATGTTCACAAGTTTGCAAAGAAGAGATC  1300
                                                        
seq2  --------------------------------------------------  0

seq1  AATATTTTAATATAAACATACAAGATTGAATTGAATTTATTATGAGAAAG  1350
                                                        
seq2  --------------------------------------------------  0

seq1  TTGACCAAATTAATACAAAAATGTGTTAAAATGGAAGAATTCAATG-AAA  1399
                                          |||||||||| |||
seq2  ------------------------------------GAATTCAATGAAAA  14

seq1  AAAAAACTACTGGTAGAAAGGCAAACATAGAAAACCTGTTTTTCCTATTA  1449
      ||||||||||||||||||||| ||||||||||||| ||||||||||||||
seq2  AAAAAACTACTGGTAGAAAGGTAAACATAGAAAACTTGTTTTTCCTATTA  64

seq1  GAAAAATTGGATAGAAACATTTTCTGATAAAATTCGAGATGTTCTTATAC  1499
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAAAAATTGGATAGAAACATTTTCTGATAAAATTCGAGATGTTCTCATAC  114

seq1  AGCATATTTGGTAAAAATGCAAAAATTAT-ACAAAAATATGGATAAGTTG  1548
      ||||||||||||||||||||||||||||| | |||||||   | || |||
seq2  AGCATATTTGGTAAAAATGCAAAAATTATAAAAAAAATACACAGAAATTG  164

seq1  TAAAAAAATTGATGGAAAAAGGCTTGTATTATTGAAGACGTAGAAAAATA  1598
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  TAAAAAAATTGATGGAAAAAGGCTTGTATTATTCAAGACGTAGAAAAATC  214

seq1  ATGTTCACTATTTGAGAGAGTAGAGATCTTCATTGCAAGTTAAAATAGA-  1647
      ||||||||||||||||| ||||||||||||| ||||||||||||||||| 
seq2  ATGTTCACTATTTGAGAAAGTAGAGATCTTCGTTGCAAGTTAAAATAGAC  264

seq1  GATTTTATTAGAATGTATTTGTGAGAAAATTGAAAAAAAATTAT-AAAAA  1696
      ||||||  |||||||||||||||||||||||| ||||||||||| |||||
seq2  GATTTTCGTAGAATGTATTTGTGAGAAAATTG-AAAAAAATTATAAAAAA  313

seq1  ATGTTTTAAAATGGAGGAATTCTTTGGAAAACACTACTGGTAGAAAGGAA  1746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTAAAATGGAGGAATTCTTTGGAAAACACTACTGGTAGAAAGGAA  363

seq1  TGCGTATTAAACATATTTTTCTAATAGGAGAAAATTGAGAGAAACATTAT  1796
       |||||||||||||||||||||  ||| ||||||||||||||||||||||
seq2  AGCGTATTAAACATATTTTTCTTTTAGTAGAAAATTGAGAGAAACATTAT  413

seq1  TTGATGAAATTCGAGATGTTCTAATACATTATTTCTGATAAAAATGTAAG  1846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGAAATTCGAGATGTTCTAATACATTATTTCTGATAAAAATGTAAG  463

seq1  AAAACTACAGGAAAAAATGTGGTTAAAATGGATGAAATTGATGGAAAAAC  1896
      ||||||| |||||||||||||||||||||||||||||||||||| |||||
seq2  AAAACTATAGGAAAAAATGTGGTTAAAATGGATGAAATTGATGGGAAAAC  513

seq1  AGGCTGTTCAAATGGAAAACTTAGAAAATTCATGTTCACTATTTTCAAAA  1946
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGGCTGTTCAAATGGAAAACTTAGAAAATTCATGTTCACTATTTGCAAAA  563

seq1  CTATAGATCATCATATTACGATAAAATAAAAGATTATATTCGAATGTATT  1996
        | |||||||||||||| ||| ||||||||||||||||||||||| |||
seq2  GCAGAGATCATCATATTATGATGAAATAAAAGATTATATTCGAATGCATT  613

seq1  TGTGACAAAATTGAAAAAAAATATTTTAAAAACGTGTTAAAATGGAAATA  2046
      |||||||||||||  ||||||||||||||||| |||||||||||||||||
seq2  TGTGACAAAATTG--AAAAAATATTTTAAAAATGTGTTAAAATGGAAATA  661

seq1  ATAGATTGAAAAATCACCGGGTAAAGAGGAAAACGTAGAAAACATATTCT  2096
      ||||| ||||||| |||||||||||||||| |||||||||||||||||||
seq2  ATAGA-TGAAAAAACACCGGGTAAAGAGGACAACGTAGAAAACATATTCT  710

seq1  TTTTCATTAGAGAAAAAGGAGAGAAACATTTTCTGATAAATTTTGAGATG  2146
      ||||||||||||||||||||||| ||||||||||||||||||| ||||||
seq2  TTTTCATTAGAGAAAAAGGAGAGCAACATTTTCTGATAAATTTCGAGATG  760

seq1  TTCTTATACACTATTTCTGATAAAAGTGAAAACTGTACAGAAAAATGTGG  2196
      |||||||||| ||||||||||||||||||||||  ||| |||||||||||
seq2  TTCTTATACATTATTTCTGATAAAAGTGAAAAC--TACGGAAAAATGTGG  808

seq1  TTAAAATGGAGGAAATTGATTGAAAAA-CGATTGGTCAAATCGAAAATGG  2245
      |||||||||||||||||| |||||||| |||||||| |||||||||||||
seq2  TTAAAATGGAGGAAATTGTTTGAAAAAGCGATTGGTGAAATCGAAAATGG  858

seq1  AGAAAACTCATGTTCACTATGAGAGACAGCTGAGGTCATCATTGTAAGAT  2295
      ||||||||||||||||||||| |||| ||| |||||||||| ||| ||||
seq2  AGAAAACTCATGTTCACTATGTGAGAAAGCAGAGGTCATCA-TGT-AGAT  906

seq1  AGGGGAGTGCGAGGGAGGGTATGGGGGACTTTTGGGATAGAATTGGAAAC  2345
      ||||||||| |||| | ||||| ||||||||||||||||||| |||||||
seq2  AGGGGAGTGGGAGGCA-GGTATTGGGGACTTTTGGGATAGAA-TGGAAAC  954

seq1  GTAATTGAGGAAAATACCTAATTTAAAAAAAATACAAGATGTTATTCAAA  2395
      || ||||||| |||||||||||||     ||||||  ||||||||||  |
seq2  GT-ATTGAGG-AAATACCTAATTT----TAAATAC-TGATGTTATTC--A  995

seq1  TATATTTTTGAGAAAATTGACAAAATTTATAGAAAAATGTTTTATAATGG  2445
      | ||||||  |||||  ||||||                           
seq2  TGTATTTT--AGAAA--TGACAA---------------------------  1014

seq1  AAGAATTCGATGGAAAAACCTTCAGTTAGAAAGGAAAACAAAGAAAACAT  2495
                                                        
seq2  --------------------------------------------------  1014

seq1  ATTTTTCCTAATAGAGAAAATGGAGAGAATCATTTTCTGATAAAATTCGA  2545
                                                        
seq2  --------------------------------------------------  1014

seq1  AATGTTCTTAAACAGCATTTGGATAAAAAGTAAAAAATTACAATAAACGT  2595
                                                        
seq2  --------------------------------------------------  1014

seq1  GGAAAAATGGAGGAATTTGATAGAAAAAAAAACCTGGTCAAATGGAAAAC  2645
                                                        
seq2  --------------------------------------------------  1014

seq1  AGGGAAAACTCATGTTCACAAGTTTTGCAAAGAAGAGATCAATATTTTAA  2695
                                                        
seq2  --------------------------------------------------  1014

seq1  TATAAACATACATGATTGAATTGAATTTATTATGAGAAAGTTGACCAAAT  2745
                                                        
seq2  --------------------------------------------------  1014

seq1  TAATACAAAAATGTGTTAAAATGGAAGAATTCAATGAAAAAAAAAAAACT  2795
                                                        
seq2  --------------------------------------------------  1014

seq1  CCTGGTAGAAAGGCAAACATAGAAAACCTGTTTTTCCTATTAGAAAAATT  2845
                                                        
seq2  --------------------------------------------------  1014

seq1  GGATAGAAACATTTTCTCATAAAATTCGAGATGTTCTTATACAGCATATT  2895
                                                        
seq2  --------------------------------------------------  1014

seq1  TGGTAAAAATGCAAAAATTATACAAAAATATGGATAAGTTGTAAAAAAAT  2945
                                                        
seq2  --------------------------------------------------  1014

seq1  TGATGGAAACAGGCTTGTATTATTGAAGACGTAGAAAAATAATGTTCACT  2995
                                                        
seq2  --------------------------------------------------  1014

seq1  ATTTGAGAAAGTAGAGATCTTCGTTGCAAGTTAAAATAGAAGATTTTATT  3045
                                                        
seq2  --------------------------------------------------  1014

seq1  AGAATGTATTTGTGAGATAATTAAAAAAAATTATAAAAAATGTTTTAAAA  3095
                                                        
seq2  --------------------------------------------------  1014

seq1  TGGAGGAATTCTTTGGAAAACACTACTGGTAGAAAGGAATGCGTATTAAA  3145
                                                        
seq2  --------------------------------------------------  1014

seq1  CATATTTTTCTAATAGGAGAAAATTGAGAGAAATATTATTTGATGAAATT  3195
                                                        
seq2  --------------------------------------------------  1014

seq1  CGAGATGTTCTAATACATTATTTTTGATAAAAATGTAAGAAAACTACAGG  3245
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAAAATGTGGTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTTCAA  3295
                                                        
seq2  --------------------------------------------------  1014

seq1  ATGGAAAACTTAGAAAATTCATGTTCACTATTTTCAAAACTATAGATCAT  3345
                                                        
seq2  --------------------------------------------------  1014

seq1  CATATTACGATAAAATAAAAGATTATATTCGAATGTATTTGTGACAAAAT  3395
                                                        
seq2  --------------------------------------------------  1014

seq1  TGAAAAAATATTTTAAAAATGTGTTAAAATGGAAATAATAGATTGAAAAA  3445
                                                        
seq2  --------------------------------------------------  1014

seq1  TCACCGGGTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTAGAGA  3495
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAAGGAGAGAAACATTTTCTGATAAATTTCGAGATGTTCTTATACACTA  3545
                                                        
seq2  --------------------------------------------------  1014

seq1  TATCTGATAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGA  3595
                                                        
seq2  --------------------------------------------------  1014

seq1  AATTGATTGAAAATCGATTGGTCAAATCGAAAATGGAGAAAACTCATGTT  3645
                                                        
seq2  --------------------------------------------------  1014

seq1  CACTATGAGAGACAGCTGAGGTCATCATTGTAAGATAGGGGAGTGCGAGG  3695
                                                        
seq2  --------------------------------------------------  1014

seq1  GAGGGTATGGGGGACTTTTGGGATTGAATTGGAAACGTAATTGAGGAAAA  3745
                                                        
seq2  --------------------------------------------------  1014

seq1  TACCTAATTTTAAAAAAATACAAGATGTTATTCAAATATATTTTTGAGAA  3795
                                                        
seq2  --------------------------------------------------  1014

seq1  AATTGACAAAATTTATAGAAAAATGTTTTATAATGGAAGAATTCGATGGA  3845
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAACCTTCAGTTAGAAAGGAAAACAAAGAAAACATATTTTTCCTAATAG  3895
                                                        
seq2  --------------------------------------------------  1014

seq1  AGAAAATGGAGAGAATCATTTTCTGATAAAATTCGAGATGTTCTTAAACA  3945
                                                        
seq2  --------------------------------------------------  1014

seq1  GCATTTGGATAAAAAGAAAAAAAAAATTACAATAAATGAGGAAAAATGGA  3995
                                                        
seq2  --------------------------------------------------  1014

seq1  GGAATTTGATAGAAAAAAAACCTGGTCAAATGGAAAACAGGGAAAACTCA  4045
                                                        
seq2  --------------------------------------------------  1014

seq1  TGTTCACAAGTTTGCAAAGAAGAGATCAATATTTTAATATAAAAATACAA  4095
                                                        
seq2  --------------------------------------------------  1014

seq1  GATTGAATTGAATTTATTATGAGAAAGTTGACCAAATTAATACAAAAATG  4145
                                                        
seq2  --------------------------------------------------  1014

seq1  TGTTAAAATGGAAGAATTCAATGAAAAAAAAACTACTGGTAGAAAGGCAA  4195
                                                        
seq2  --------------------------------------------------  1014

seq1  ACATAGAAAACCTGTTTTTCCTATTAGAAAAATTGGATAGAAACATTTTC  4245
                                                        
seq2  --------------------------------------------------  1014

seq1  TGGTAAAATTCGAGATGTTCTTATACAGCATATTTGGTAAAAATGCAAAA  4295
                                                        
seq2  --------------------------------------------------  1014

seq1  ATTATACAAAAATATGGATAAGTTGTATAAAAATTTATGGAAAAAGGCTT  4345
                                                        
seq2  --------------------------------------------------  1014

seq1  GTATTATTGAAGACGTAGAAAAATAATGTTCACTATTTGAGAAAGTAGAG  4395
                                                        
seq2  --------------------------------------------------  1014

seq1  ATCTTCGTTGCAAGTTAAAATAGAAGATTTTATTAGAATGTATTTGTGAG  4445
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAATTGAAAAAAAATATAAAAAAATGTTTTAAAATGGAGGAATTCTTTG  4495
                                                        
seq2  --------------------------------------------------  1014

seq1  GAAAACACTACTGGTAGAAAGGAATGCGTATTAAACATATTTTTCTAATA  4545
                                                        
seq2  --------------------------------------------------  1014

seq1  GGAGAAAATTGAGAGAAACATTATTTGATGAAATTCGAGATGTTCTAATA  4595
                                                        
seq2  --------------------------------------------------  1014

seq1  CATTATTTCTGGAAAAAATGTAAGAAAACTACAGGAAAAAATGTGGTTAA  4645
                                                        
seq2  --------------------------------------------------  1014

seq1  AATGGAGGAAATTGATTGAAAAACGATTGGTGATATCGAAAATGGAGAAA  4695
                                                        
seq2  --------------------------------------------------  1014

seq1  ACTCATGTTCACTATGAGAGAAAGCTGAGGTCATCAATGTAAGATAAGGG  4745
                                                        
seq2  --------------------------------------------------  1014

seq1  AGTGCGAGGGAGGGTATGGGGTACTTTTGGGATAGAATTTGAAACGTAAT  4795
                                                        
seq2  --------------------------------------------------  1014

seq1  TGAGGAAAATACCTAATTTAATAAAAATACAAGATGGTATTCAAATATAT  4845
                                                        
seq2  --------------------------------------------------  1014

seq1  TTTTGAGAAAATTGACAAAATTTATAGAAAAATGTTTTATAATGGAAGAA  4895
                                                        
seq2  --------------------------------------------------  1014

seq1  TTCGATGGAAAAACCTTCAGTTAGAAAGGAAAACAAAGAAAACATATTTT  4945
                                                        
seq2  --------------------------------------------------  1014

seq1  TCCGAATAGAGAAAATGGAGAGAATCATTTTCTGATAAAATTCGAGATGT  4995
                                                        
seq2  --------------------------------------------------  1014

seq1  TCTTAAACAGCATTTGGATAAAAAGAAAAAAAAATTACAATAAATGAGGA  5045
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAATGGAGGAATTTGATAGAAAAAAAACCTGGTCAAATGGAAAACAGGG  5095
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAACTCATGTTCACAAGTTTGCAAAGAAGAGATCAATATTTTAATATAA  5145
                                                        
seq2  --------------------------------------------------  1014

seq1  AAATACAAGATTGAATTGAATTTATTATGAGAAAATTGACCAAATTAATA  5195
                                                        
seq2  --------------------------------------------------  1014

seq1  CAAAAATGTGTTAAAATGGAAGAATTTAATGAAAAAAAACTACTGGTAGA  5245
                                                        
seq2  --------------------------------------------------  1014

seq1  AAGGCAAACATAGAAAACCTGTTTTTTCTATTAGAAAAATTGGATAGAAA  5295
                                                        
seq2  --------------------------------------------------  1014

seq1  CATTTTCTGATAAAATTCGAGATGTTCTTATACAGCATATTTGGTAAAAA  5345
                                                        
seq2  --------------------------------------------------  1014

seq1  TGCAAAAATTATACAAAAATATGGATAAGTTGTAAAAAAATTGATGGAAA  5395
                                                        
seq2  --------------------------------------------------  1014

seq1  AAGGCTAGTATTATTGAAGACGTAGAAAAATAATGTTCACTATTTGAGAA  5445
                                                        
seq2  --------------------------------------------------  1014

seq1  AGTAGAGATCTTCGTTGCAAGTTAAAATAGAAGATTTTATTAGAATGTAT  5495
                                                        
seq2  --------------------------------------------------  1014

seq1  CTGTGAGAATATTGAAAAAATTATAAAAAAATGTTTTAAAATGGAGGAAT  5545
                                                        
seq2  --------------------------------------------------  1014

seq1  TCTTTGGAAAACACTACTGGTAGAAAGGAAAGCGTATTAAACATGTTTTT  5595
                                                        
seq2  --------------------------------------------------  1014

seq1  CTAATAGGAGAAAATTGAGAGAAACATTATTTGATGAAATTCGAGATGCT  5645
                                                        
seq2  --------------------------------------------------  1014

seq1  CTAATACATTATTTCTGATAAAAATGTAAGAAAACTACAGGAAAAAAAAG  5695
                                                        
seq2  --------------------------------------------------  1014

seq1  GGTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTACAAATGGAAAAC  5745
                                                        
seq2  --------------------------------------------------  1014

seq1  TTAGAAAATTCATCTTCACTATTTGCAAAAGCAGAGATCATCATATTACG  5795
                                                        
seq2  --------------------------------------------------  1014

seq1  ATAAAATAAAAGATTATATTCGAATGTATTTGTGACAAAATTCAAAAAAA  5845
                                                        
seq2  --------------------------------------------------  1014

seq1  ATATTTTAAAAATGTGTTAAAATGGAAATATTAGAGTGAAAAAACACCGG  5895
                                                        
seq2  --------------------------------------------------  1014

seq1  GTAAAGAGGAAAACGTAGAAAACATATTCTTTTCCATTAGACAAAAAGGA  5945
                                                        
seq2  --------------------------------------------------  1014

seq1  GAGAAACATTTTCTGATAAATTTCGAGATGTTCTTATACACTATTTCTGA  5995
                                                        
seq2  --------------------------------------------------  1014

seq1  TAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGGAGGAAATTGAT  6045
                                                        
seq2  --------------------------------------------------  1014

seq1  TGAAAAACGATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATG  6095
                                                        
seq2  --------------------------------------------------  1014

seq1  AGAGAAAGCTGAGGTCATCAATGTAAGATAGGGGAGTGCGAGGGAGGGTA  6145
                                                        
seq2  --------------------------------------------------  1014

seq1  TGGGGGACTTTTGGGATAGAATTGGAAACGTAATTGAGGAAAATACCCAA  6195
                                                        
seq2  --------------------------------------------------  1014

seq1  TTTTAAAAAATTACAAGATGTTATTCAAATGTATTTTTGAGAAAATTGAC  6245
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAATTTATAGAAAAATGTTTTATAATGGAAGAATTCGATGGAAAAACCT  6295
                                                        
seq2  --------------------------------------------------  1014

seq1  TCAGTTAGAAAGGAAAACAAAGAAAACATATTTTTTCTAATAGAGAAAAT  6345
                                                        
seq2  --------------------------------------------------  1014

seq1  GGAGAGAATCATTTTCTGAGAAAAATCGAGATATTCTTAAACAGCATTTG  6395
                                                        
seq2  --------------------------------------------------  1014

seq1  GATAAAAAGAAAAAAATTACAAAAACGTGGAAAAATGGAGGAATTTGATA  6445
                                                        
seq2  --------------------------------------------------  1014

seq1  GAAAAAAAACCTGGTCATTTGGAAAACAGGGAAAACTCATGTTCACAAGT  6495
                                                        
seq2  --------------------------------------------------  1014

seq1  TTGCAAAGAAGAGATCAATATTTTAATATAAAAATACAAGATTAATTTTA  6545
                                                        
seq2  --------------------------------------------------  1014

seq1  ATTTATTCATGAGAAAGTTGACAAAATTAATACAAAAATGTGTTAAAATT  6595
                                                        
seq2  --------------------------------------------------  1014

seq1  GAAGAATTCAATGAAAAAAAAAAAACTACTGGTAGAAAGGCAAACATAGA  6645
                                                        
seq2  --------------------------------------------------  1014

seq1  AAACGTGTTTTTCCTATTAGAAAAATTGGATAGAAACATTTTCTGATAAA  6695
                                                        
seq2  --------------------------------------------------  1014

seq1  ATTCGAGATGTTCTTATACAGCATATTTGGTAAAAATGCAAAAATTATAC  6745
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAAATATGAGTAAATTGTAAAAAAAATTGATGGAAAAAAATGCTTGTAT  6795
                                                        
seq2  --------------------------------------------------  1014

seq1  TATTGAAGACGTAGAAAAATCATGTTCACTATTTGAGAAAGTAGAGATCT  6845
                                                        
seq2  --------------------------------------------------  1014

seq1  TCATTGCAAGTAAATATAGAAGATTTTATTAGAAGGTATTTGTGTGAAAA  6895
                                                        
seq2  --------------------------------------------------  1014

seq1  TTGAAAAAAATTATAAAAAAAATGTTTTAAAATGAAGGAATTCTTTGGCA  6945
                                                        
seq2  --------------------------------------------------  1014

seq1  AACTCTACTGTTAGAAAGTAAAGCGTAGAAAACATATTTGTCTAATAGGA  6995
                                                        
seq2  --------------------------------------------------  1014

seq1  GAAAATTGAGAGAAACATTATTTGATGAAATTTGAGATGTTCTAATACAT  7045
                                                        
seq2  --------------------------------------------------  1014

seq1  TATTTCTGATAAAAATGTAGGAAAACTATAGGAAAAAAATGTGGTTAAAA  7095
                                                        
seq2  --------------------------------------------------  1014

seq1  TGGATGAAATTGTTGGAAAACCAGGCTGTTCAAATGGAAAACTTAGAAAA  7145
                                                        
seq2  --------------------------------------------------  1014

seq1  TTCATGTTCACTATTTGCAAAAGCAGAGATCATCATATTACGACAAAATC  7195
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAGATTATATTCGAATGTATTTGTGACAAAATTGAAAAAAATATTTTAA  7245
                                                        
seq2  --------------------------------------------------  1014

seq1  AAATGTGTTAAAATGGAAATATTAGAGTGAAAAAACACCGGGTAAAGAGG  7295
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAACGTAGAAAACACATTCTTTTTCATTAGACAAAAAGGAGAGAAACAT  7345
                                                        
seq2  --------------------------------------------------  1014

seq1  TTTCTGATAAATTTCGAGATGTTCTTATTCACTATTTCTGATAAAAGTGA  7395
                                                        
seq2  --------------------------------------------------  1014

seq1  AAACTGTACAGAAAAAATGTGGTTAAAATGAAGGAAATTGATTGAAAAAT  7445
                                                        
seq2  --------------------------------------------------  1014

seq1  GATTGGTCAAATCGAAAATGGAGAAAACTCATGTTCACTATAAGAGAAAG  7495
                                                        
seq2  --------------------------------------------------  1014

seq1  CTGAGGTCATCATTGTAAGATAGGGGAGTGCGAGGGAGGGAATGGGGGAC  7545
                                                        
seq2  --------------------------------------------------  1014

seq1  TTTTGGGATAGAATTGGAAACTTAATTGAGGAAAATACCTAATTTTTTAA  7595
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAATACAAGATGTTATTCAAATATATTTTTGAGAAAATTGACAAAATTT  7645
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAGAAAAATGTTTTATAATGGAAGAATTCGATGGAAAAACCTTCAGTTA  7695
                                                        
seq2  --------------------------------------------------  1014

seq1  GAAAGGAAAACAAAGAAAACATATTTTTCCTAATAGAGAAAATGGAGAGA  7745
                                                        
seq2  --------------------------------------------------  1014

seq1  ATCATTTTCTGATAAAATTCGAGATGTTCTTAAACAGCATTTGGATAAAA  7795
                                                        
seq2  --------------------------------------------------  1014

seq1  AGAAAAAAATTACAATAAACGTGGAAAAATGGAGGAATTTGATAGAAAAA  7845
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAAACCTGGTCAATTGGAAAACAGGTAAAACTCATGTTCACAAGTTTGC  7895
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAGAAGAGATCAATATTTTAATAAAAAAATGCAAGATTGAATTCTAATT  7945
                                                        
seq2  --------------------------------------------------  1014

seq1  TATTTATGAGAAAGTTGACAAAATTAATACAAAAATGTGTTAAAATGGAA  7995
                                                        
seq2  --------------------------------------------------  1014

seq1  GAATTCAATGAAAAAAAAAAAACTACTGGTAGAAAGGCAAACATAGAAAA  8045
                                                        
seq2  --------------------------------------------------  1014

seq1  CCTGTTTTTTTTATTAGAAAAATTGGATAGAAACATTTTCTGATAAAATT  8095
                                                        
seq2  --------------------------------------------------  1014

seq1  CGAGACGTTCATATACAGCATATTTGGTAAAAAATGCAAAAATTATACAA  8145
                                                        
seq2  --------------------------------------------------  1014

seq1  AAATATGGATAAGTTGTAAAAAAATTGATGGAAAAAGGCTTGTATTATTG  8195
                                                        
seq2  --------------------------------------------------  1014

seq1  AAGACGTAGAAAAATAATGTTCACTATTTGAGAAAGTAGAGATTTTCCTT  8245
                                                        
seq2  --------------------------------------------------  1014

seq1  GCAAGTTAAAATAGAAGATTTTATTAGAATGTATTTGTGAGAAAATTGAA  8295
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAAATTATAAAAAAATGTTTTAAAATGGAGGAATTCTTTGGAAAACACT  8345
                                                        
seq2  --------------------------------------------------  1014

seq1  ACTGGTAGAAAGGAAAGGATATTAAACATATTTATCTAATAGGAGAAAAT  8395
                                                        
seq2  --------------------------------------------------  1014

seq1  TGAGAGAAACATTATTTGATGAAATTCAGGATGTTCTAATACATTATTTA  8445
                                                        
seq2  --------------------------------------------------  1014

seq1  TGAAAAAAAATGTAAGAAAACTATAGGAAAAATGTGGTTAAAATTGATGA  8495
                                                        
seq2  --------------------------------------------------  1014

seq1  AATTGATGGAAAAACAGGCTGTACAAATGGAAAACGTAGAAAATTCATGT  8545
                                                        
seq2  --------------------------------------------------  1014

seq1  TCACTATTTGCAAAAGCAGAGATCATCATATTACGATAAAATAAAAGATT  8595
                                                        
seq2  --------------------------------------------------  1014

seq1  ACATTCGAATGTATTTGTGACAAAATTGAAAAAATATTTTAAAAATATGT  8645
                                                        
seq2  --------------------------------------------------  1014

seq1  TAAAATGGAAATAATAGATTGAAAAAACACCGGGTAAAGAGGAAAATGCA  8695
                                                        
seq2  --------------------------------------------------  1014

seq1  GAAAACATATTCTTTTTCATTAGAGTAAAAGGAGAGAAACATTTTCTGAT  8745
                                                        
seq2  --------------------------------------------------  1014

seq1  AAATTTTCAGATGTTCTTATACCCTATTTCTGATAAAAGTGAAAACTGTA  8795
                                                        
seq2  --------------------------------------------------  1014

seq1  CAGAAAAATGTGGTTAAAATGGAGGAAATTGATTGAAAAACGATTGGTCA  8845
                                                        
seq2  --------------------------------------------------  1014

seq1  AATCGAAAATGGAGAAAACTCATGTTCACTATGAGAGAAAGCAGAGGTCA  8895
                                                        
seq2  --------------------------------------------------  1014

seq1  TCAATGTAAGATAGGAAAGTGCGAGGGACGGTATGGGGGACTTTTGGGAT  8945
                                                        
seq2  --------------------------------------------------  1014

seq1  AGAATTGGAAACGTAATTGAGGAAAATACCTAATTTTAAAATAATACAAG  8995
                                                        
seq2  --------------------------------------------------  1014

seq1  ATGTTATTCAAATATATTTTTGAGAAAATTGACAAAATTTAAAGAAAAAT  9045
                                                        
seq2  --------------------------------------------------  1014

seq1  GTTTTATAATGGAAGAATTTGATGGAAAAACCTTCAGTTAGAAAGGAAAA  9095
                                                        
seq2  --------------------------------------------------  1014

seq1  CAAAGAAAACATATTTTTCCTAATAGAGAAAATGTAGAGAATCATTTTCT  9145
                                                        
seq2  --------------------------------------------------  1014

seq1  GATAAAATTCGAGTTGTTCTTAAACAGCATTTGGATAAAAAAAAAATTAC  9195
                                                        
seq2  --------------------------------------------------  1014

seq1  AATAAACGAGGAAAAATGGAGGAATTTGATAGAAAAAAAACCTGGTCAAA  9245
                                                        
seq2  --------------------------------------------------  1014

seq1  TCGAAAACAGGGAAAACTCATGTTCACAAGTTTGCAAAGAAGAGATCAAT  9295
                                                        
seq2  --------------------------------------------------  1014

seq1  ATTTTAATATAAAAATACAAGATTGAATTGAATTTATTATGAGAAATTTG  9345
                                                        
seq2  --------------------------------------------------  1014

seq1  ACAAAATTAATACAAAAATGTGTTAAAATGGAAGAATTCAATGAAAAAAA  9395
                                                        
seq2  --------------------------------------------------  1014

seq1  AACTACTGGTAGAAAGGCAAACATAGAAAACCTGTTTTTCCTATTAAAAA  9445
                                                        
seq2  --------------------------------------------------  1014

seq1  ATTGGATAGAAACATTTTCTCATAAAAATCGAGATGTTCTTATATAGCAT  9495
                                                        
seq2  --------------------------------------------------  1014

seq1  ATTTGGTAAAAATGCAAAAATTATACAAAAATATGGATAAGTTGTAAAAA  9545
                                                        
seq2  --------------------------------------------------  1014

seq1  AATTGATGGAAAAAGGCTTGTATTATTGAAGACGTAGAAAAATAATGTTC  9595
                                                        
seq2  --------------------------------------------------  1014

seq1  ACTATTTGAGAAAGTAGAGATCTTCGTTGCAAGTTAAAATAGAAGATTTT  9645
                                                        
seq2  --------------------------------------------------  1014

seq1  ATTAGAATGTTATTTGTGAGAAAATTGAAAAAAATTATAAAAAATGTTTT  9695
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAATGGAGGAATTCTTTGGAAAACACTACTGGTAGAAATGAAAGCGTAT  9745
                                                        
seq2  --------------------------------------------------  1014

seq1  TAAACATGTTTTTCTAATAGGAGAAAATTGAGAGAAACATTATTTGATGA  9795
                                                        
seq2  --------------------------------------------------  1014

seq1  AATTCGAGATGCTCTAATACATTATTTCTGATAAAAATGTAAGAAAACTA  9845
                                                        
seq2  --------------------------------------------------  1014

seq1  CAGGAAAAAAAGGGTTAAAATGGATGAAATTGATGGAAAAACAGGCTGTA  9895
                                                        
seq2  --------------------------------------------------  1014

seq1  CAAATGGAAAACTTAGAAAATTCATCTTCACTATTTGCAAAAGCAGAGAT  9945
                                                        
seq2  --------------------------------------------------  1014

seq1  CATCATATTACGATAAAATAAAAGATTATATTCGAATGTATTTGTGACAA  9995
                                                        
seq2  --------------------------------------------------  1014

seq1  AATTTAAAAAAAATATTTTAAATAGTGTTAAAATGGAAATATTAGAGTGA  10045
                                                        
seq2  --------------------------------------------------  1014

seq1  AAAAACACCGGGTAAAGAGGAAAACGTAGAAAACATATTCTTTTTCATTA  10095
                                                        
seq2  --------------------------------------------------  1014

seq1  GACAAAAAGGAGAGAAACATTTTCTGATAAATTTCGAGATGTTCTTATAC  10145
                                                        
seq2  --------------------------------------------------  1014

seq1  ACTATTTCTGATAAAAGTGAAAACTGTACAGAAAAATGTGGTTAAAATGG  10195
                                                        
seq2  --------------------------------------------------  1014

seq1  AGGAAATTGATTGAAAAAGCGATTGGTCAAATCGAAAATGGAGAAAACTC  10245
                                                        
seq2  --------------------------------------------------  1014

seq1  ATGTTCACTATGTGAGAAAGCAGAGGTCATCATTGTAAGATAGGGGAGTG  10295
                                                        
seq2  --------------------------------------------------  1014

seq1  GGAGGGAGGGTATGGGGGACTTTTGGGATAGAATTGGAAACGTAATTGAG  10345
                                                        
seq2  --------------------------------------------------  1014

seq1  GAAAATACCCAATTTTAAAAAATTACAAGATGTTATTCAAATGTATTTTT  10395
                                                        
seq2  --------------------------------------------------  1014

seq1  GAGAAAATTGACAA  10409
                    
seq2  --------------  1014

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information