BAC Information

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BAC

Clone NameB6Ng01-343N06
ChromosomeX (Build37)
Map Location 66,155,895 - 66,156,448
singlet/doubletsinglet
Overlap genenone
Upstream gene4933436I01Rik, LOC100040194, EG236844, LOC385372, LOC627888, LOC434788, Fmr1, Fmr1nb, LOC100040244, EG627927
Downstream geneLOC666882, LOC671950, LOC100040255, Aff2, EG666577
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343N06.bB6Ng01-343N06.g
ACCGA126499GA126500
length5481,179
definitionB6Ng01-343N06.b B6Ng01-343N06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cataaaaacacaaactggcaaccataatgtatgtgcaaaggaccttattt
gtctttctgggtctcaggatggtttttctagttccatccatttgcctgtc
agtttcattctgtcaagtattttgaattaaaatttttttatgttaagaga
aaccgtgtcattttttttattctctatttttgtattttctccccagtaga
aatttagaatagatattcttgataccttttttggaaaacacctggttgta
atactgaacagtttctcagctctgtaatctgcttctctgatgtgtgtgct
tgcgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagatgcttgtgt
gcttgtgcgtgtgaattttagtcactgcatcctcttctgtttactgtggt
tttgtaatgtgtttttcaagtgaggttgtatgatgcaactttgataattc
tgggttaaaaaattttgatatgagtgggtggctccatccctcaactgggg
gccatgtatatctactgaaagtgttctgttcaggttctatctccctgc

gaattctcacctgaggtatacccaatgtctgagaagcacctgaaaaaatg
ttcagcattcttaatcatcagggaaatgcaaatcaaaacaactctgagat
tccatctcacaccagtcagaatggcttagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactctaccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccagaggatccctcaatacctctcttgggc
atatatccagaagatattccaactagtaagaaagacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagagcaatgtatacaaaaaatatggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcattatcctgagtgaggtaacctaatcacaaa
agtactcaaatgatatgtactcactgataagtggatattagctcagaaac
ttagaatacccaagatatgttacaatttgcaaagcacatgaaactcaaga
agaaggaataccaaagtgtggacactttggcccttcttagaattgggaac
aaaacacccatggaaggaattacagagacaaagtttggagctgagacata
aggatggaccacctagagactgccatatccagggatccatcccataatca
gcctccaaacactgacaccattgcatacactagcaagattttgctgaaag
gaccctaatataggtgtctcttgtgagactatgccggggcttagcaaaca
cagaagtgggatgctcacagtcagctattggatggatcacagggccccaa
tgaaggagctagagaaagtaccaagtgctaaatcgatctgcaaccctata
ggtggaacacatatgactaccagtaccccagagctctgactctagctgca
tatgtatcaaagaatgcctgtccgtcatcactgaagggaggcccaatgac
atgcagctttatatgcccagtaaggatatgccagaaccaaattggcactg
gtgggttaaggcactgacagcgctctcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_66155895_66156448
seq2: B6Ng01-343N06.b_47_600

seq1  GAATTCCATAAAAACACAAACTGGCAACCATAATGTATGTGCAAAGGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAAAACACAAACTGGCAACCATAATGTATGTGCAAAGGACC  50

seq1  TTATTTGTCTTTCTGGGTCTCAGGATGGTTTTTCTAGTTCCATCCATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGTCTTTCTGGGTCTCAGGATGGTTTTTCTAGTTCCATCCATTTG  100

seq1  CCTGTCAGTTTCATTCTGTCAAGTATTTTGAATTAAAATTTTTTTATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAGTTTCATTCTGTCAAGTATTTTGAATTAAAATTTTTTTATGTT  150

seq1  AAGAGAAACCGTGTCATTTTTTTTATTCTCTATTTTTGTATTTTCTCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAACCGTGTCATTTTTTTTATTCTCTATTTTTGTATTTTCTCCCC  200

seq1  AGTAGAAATTTAGAATAGATATTCTTGATACCTTTTTTGGAAAACACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAATTTAGAATAGATATTCTTGATACCTTTTTTGGAAAACACCTG  250

seq1  GTTGTAATACTGAACAGTTTCTCAGCTCTGTAATCTGCTTCTCTGATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAATACTGAACAGTTTCTCAGCTCTGTAATCTGCTTCTCTGATGTG  300

seq1  TGTGCTTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGATGC  350

seq1  TTGTGTGCTTGTGCGTGTGAATTTTAGTCACTGCATCCTCTTCTGTTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGCTTGTGCGTGTGAATTTTAGTCACTGCATCCTCTTCTGTTTAC  400

seq1  TGTGGTTTTGTAATGTGTTTTTCAAGTGAGGTTGTATGATGCAGCTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGTGGTTTTGTAATGTGTTTTTCAAGTGAGGTTGTATGATGCAACTTTGA  450

seq1  TAATTCTGGGTTAAAAAATTTTGATATGAGTGGGTGGCTCCATCCCTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTGGGTTAAAAAATTTTGATATGAGTGGGTGGCTCCATCCCTCAA  500

seq1  CTGGGGGCCATGTATATCTACTGAAAGTGTTCTGTTCAGGTTCTATCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGCCATGTATATCTACTGAAAGTGTTCTGTTCAGGTTCTATCTCC  550

seq1  CTGC  554
      ||||
seq2  CTGC  554


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